Acanthopagrus latus (yellowfin seabream): 119014605
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Entry
119014605 CDS
T08233
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04020
Calcium signaling pathway
alat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119014605 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119014605 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119014605 (grin2ca)
Ion channels [BR:
alat04040
]
Ligand-gated channels
Glutamate (ionotropic)
119014605 (grin2ca)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
119014605
NCBI-ProteinID:
XP_036945828
EnsemblRapid:
ENSALTG00010006233
LinkDB
All DBs
Position
23:23425632..23489608
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AA seq
1414 aa
AA seq
DB search
MGVRLGCSSDSPWWPPPLLLLLLFCTLPCCSGRPFGIPMPSVNVAVVFSGSAYQTEIKGR
LSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQILD
FISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVIT
SLYPGYETYVDYIKSFTDTSYFIWELQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYC
SHEEAQYLFTMAAEAGLVGPGYIWIIPSLAVGNPDIPPPDSFPVGLISIITDRWRMSLRK
RVRDGVAIVVKGVQSFRKQRGFVPEGHSDCHNPVKPSATNDTLFRHMLNVTWENNDFSFN
SNGYLVNPAMIIITLDRERQWDKVGTYETGILQMRYPVWPRYGSYLEPVSDYRHLTVATL
EERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLSR
NIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFV
ETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSLV
TAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANL
AAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYN
QKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDS
RWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMG
LSLLVFAWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEQTDRNGSMQSPDVTTN
YSQANMLKMLQTAKDMVSSARVENSLDNATKTIENWSRRGADNVRAGLPPRITTTDMTHG
RLPYISSITDNHSPYPQRALTPTFPIHYGDGSTQPLLDKPRVVTRPTPLRYTLPSRNSQH
ILERTLPISSLSSPHIAMRDPAPPGTSNPHHSSRLYVENQARHPTSPFVPYREFQVPDIY
VEHKGPLRRKFSYPPDCVSRRRRSHSYVFDAADPRVRGDYDEPRSCLAELRANHLLNNHA
SVGAAMACTAGHYPGGSTSCNSCMKSYLEPEMDDVPLLGKEKLNRRASFLKATWGNDRIH
QVDETKPSTSKSQPTRADMPDLFPRVVVANPKPHKLYGSLGHNLSCYPLAAEPAYLDPAH
MGSYPYKQKLKYSESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGP
LAQGPSQFYDSSKDMCHLFPCTSHCPDNAAMLPRMSDRPVVYHNNMFGPYDGTGKREDPG
SGSRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgctccagcgactccccgtggtggccgccaccgctgctgctg
ctgctgctgttctgcactctgccctgctgttcaggaaggccgttcgggattcccatgccc
tctgtgaacgtggcggtggtgttcagcggctcggcctaccagactgagattaaggggcgg
ttaagcagggagaacttcatggacctgcctctggaagtgaaccccatcactgtgctggtc
aacaacaccaacccacgggcgctgctcacccgcatctgtgacaccctgtccaccaaccgc
gtccatggagtggtgttcgaggacaacgttggctcggaggccgtggcacagatcttggac
ttcatttccactcagacagctgtgcccatcgtgggcatcagcggcggctcggctgtcgtc
ctgccatacaagggtgagggctccaacttcctccagctgggctcctccatcgagcagcag
atcaacggcatgttcaaggtgatggaggagtacaactgggacagctttgtggtcatcacc
agcctctacccgggctatgaaacctacgtggattacattaagtccttcacagacaccagc
tacttcatatgggagctgcaggacgtgctgaccttcgacatgtcagccgacggcatgaac
gacatccgagcgcgaaggctgctgcagcagattgacgcccaggtgctgctggtctactgc
tcccatgaagaggcgcagtacctgttcaccatggcagccgaggctggactggtggggcca
ggctacatctggattattcccagcctggcagtggggaacccggacatccccccgccggac
agcttccctgtggggctcatcagcatcatcacggaccgatggaggatgagcctgaggaag
agggtacgggacggggtggccatcgtggtgaaaggcgtgcaaagctttcggaaacagaga
ggctttgttcctgaaggccacagtgactgtcacaaccccgtcaagccctctgctactaat
gacactctgttcaggcacatgttgaatgtaacctgggaaaacaacgacttctcctttaac
agtaacggttacctggtgaatccagccatgatcatcatcacgttggaccgagagagacag
tgggacaaggtggggacctacgaaacggggatcctgcaaatgagataccccgtgtggccg
cggtacggctcctacctggagccagtgtcggattacaggcacctgacagtggccacgctg
gaggagaggccctttgtcattgtggaggcagtggaccccgtgactggtacatgtgtcagc
aacactgtaccctgccgacgacagtccaacaagacagaggctatcgtgggtcacaccgag
ccgtacacaaagctgtgctgtaagggcttctgcatcgacatcctgaagaagctgtcccgc
aacattaagttttcctacgacctctacctggtcaccaacggcaagcacggcaagctggtc
cgaggcatttggaacgggatgatcggagaggtgttctacaagcgggcggacatggccatc
ggctcactgaccataaacgaggagcgctctgagattattgacttctcagtgccgtttgtg
gagacggggatcagcgtgatggtggccagaagtaacgggactgtctcaccatctgccttt
ttagaaccgtacagtccagcggtctgggtgatgatgttcgtcatgtgtctgactgtcgtg
gccatcacagtctttgtctttgaatactgcagtccagttggatacaaccgaagcctggtt
actgcaaaagatcccggtggtcccaccttcactatcgggaagtcagtgtggctgctgtgg
ggaatcgtcttcaacaactctgtccccattgagaatccgaagggcaccaccagtaagatc
atggtcttggtctgggctttcttcgctgtcatcttccttgcctcctacacagccaacctg
gctgctttcatgatccaggagcaatacatcgacacggtctctgggctgagcgacaaaaag
tttcaaaagccacaggagcagtaccctccattccgatttggtacggtcccaaatggcagc
acagagcgcaacataaggagtaactaccctgagatgcactcccacatggtcaaatacaac
cagaagggagtagaggatgccctcaacagcctcaaaacagggaaactggatgcctttatc
tatgatgctgctgtgctgaattacatggctggcaaagatgagggctgcaagctggtgacc
attggcagtgggaaagtgtttgctaccactggttatggcattgctctgcagaaggattca
cgctggaaacgacccatcgacctggccctgctccagttcctggctgacggcgacacacag
aagctgcagaccgtctggctcacaggcatctgccgcaatgagaagaaagaggtgatgagc
agtaagctggacattgacaacatggcgggagttttctacatgctgcttgtggctatgggc
ctgagcctgctggtttttgcttgggagcatctgctatactggaaactacgacattcagtc
cgcaaatccgagcgcctggacttcctcctagctatcagtagaggtatctacagctgcttt
aatggagtagagcaaactgaccgcaatgggagtatgcagagtccagacgtaactactaac
tattcacaagccaatatgctaaagatgctgcagacagccaaggacatggtgtcctctgcc
agagtggagaactctctagacaatgccaccaaaacaatagagaactggagcaggcgtggg
gccgacaatgtgcgggccggcctgccacctagaataaccaccacagacatgacccatggc
cgtctgccctacatctccagcatcacagataaccactcaccatacccacagagggccctc
acacccaccttcccaattcattatggggacggctccacccagccacttctggataagccc
cgggtggtgacccgacccactccactccgctacacgctacccagtcgcaacagtcagcat
atcttagagaggactctgcccatctccagcctcagcagccctcatatcgcaatgcgggac
cctgctccccctggtacttctaacccccaccacagcagcaggctgtatgtggagaaccag
gcccggcaccccacatccccatttgttccttacagggagttccaggtgccagatatctat
gtggagcacaaaggaccgctgaggaggaagtttagctaccctcctgactgtgtgagccgg
aggaggaggtcccatagttacgtgtttgatgctgcagaccccagagtcagaggagactat
gatgaacctcgatcctgccttgccgagttgagggccaatcacctcctgaacaaccatgcc
tctgttggtgccgccatggcctgcactgcaggacactacccaggtggcagcaccagctgc
aactcctgtatgaagtcttacctggagcctgaaatggatgatgtaccgctcctggggaag
gagaaactcaaccgccgagcctcatttctcaaagccacttggggcaatgataggatccat
caggtggatgaaacaaaaccctccacatccaaatcgcagcccacccgtgcagacatgcct
gacctttttccaagggtggtagtggccaacccaaagccccacaagctctacggcagtctg
gggcacaacctgtcctgctaccccttggctgctgagcctgcatacttggacccagcccac
atgggctcctacccctacaagcaaaagctcaagtactccgagtccacccggctgccctct
tatagggaagccatcctgcagaatgccgctgccctgcgccgctcctcctccacagtggtg
cacagacactactccacctacctaaactcgtacacagacttgccagtgtatgtagggcca
ctggctcagggaccatcccagttctatgatagttccaaggacatgtgccacttgttcccc
tgtacaagccactgcccagataacgcagcaatgctgcctcgcatgagtgacaggccggtg
gtttatcacaacaatatgtttgggccctacgatggcacaggaaagagggaagacccaggc
tctgggagcagagagcggaggcaggtgttggtggcgcgcagagtcaacagtccgtatgtg
ccaaagccctggggcagagtatccagcctggagtctgaggtctga
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