Acanthopagrus latus (yellowfin seabream): 119014967
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Entry
119014967 CDS
T08233
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119014967 (scn1lab)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119014967 (scn1lab)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
Spem1
IQ
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
119014967
NCBI-ProteinID:
XP_036946330
EnsemblRapid:
ENSALTG00010025350
LinkDB
All DBs
Position
24:complement(8245805..8281365)
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AA seq
2020 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEEARRPRAERRSDSDDDNGPKPNSDLEAGK
SLPFIYGDIPPHLVSTPLEDIDTFYSNQKTFIVLNRGKAIFRFNATPALYILNPFNPLRR
VAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRLPVSTNGTNGTNITADDMPF
FNSTTFTLNATESPFNWTEYISDDNNYYYLPGRRDALLCGNGSGAGLCPEGFICIKAGRN
PDYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNL
ILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGP
TSESSSGTSKLSSKSAKERRNRRKKRKQREEEEERGARDKFHKSESEDSIKRSSFRFSID
ANRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFE
ESDSRRGSLFLPRRLERRCSAISQTSLGAPRIMLPANGKMHCSVDCNGVVSLVGGTSVTT
SPVGLLLPEGTTTDTELKKRRSGFHQPSMDYLDEPGGRQRAMSVASILTNTMEELEESRQ
KCPPCWYRFANTALIWDCCPAWLKIKEVVNSVVMDPFVDLAITICIVLNTLFMAMEHYPM
TTEFANVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNVFDGIIVSLSLIELGLANV
EGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKSYKECVCKISDDCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVF
MMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFVKTTVRH
FLQSLCFSGGGKGSGLAEESKPLDELHSNGKGNCISNHTSVEITKDPSGVYMTEGNGRPG
GGLVVGVVVGGDTTGKYPMEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSD
VEGSKEKLDAEPQRLSSSEGSTVDIRPPGDGVDSVELEPEESLDPEACFTEGCVRRFQCC
QINEEGANYKSWWNLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTVL
EYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELTAI
KSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
YYYCVNTTNDEVFPISVVNNMTECLNLINDSARWKNVKINFDNVGAGYLALLQVATFKGW
MDIMYAAVDSRDLEEQPEYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDCITKQAFDIVIMILICLN
MVTMMVETDDQTSEMDNILYWINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVIL
SIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPIL
NKREPDCDSQMEHPGNYYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATE
ESAEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADALDPPLRMPKPNMIQLISMDL
PMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITTTLRRKQ
EDMSAIIIQRAFRRYMIRLAMKKASALYKEKLKEGIRDPDKDVMVISKFTENSTSDKMDM
TPSTASPPSYNSVTKSDKDKYEKENREKENKGKDLKDRKK
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccgccccttcgtccccgagtcg
ctggccgccatcgagaggcgcatcgccgaggaggaggcccggagaccgcgggcggagcgc
cgcagcgacagcgacgatgacaatgggcccaagcccaacagcgacctggaggcggggaag
tctctccccttcatctacggggacatccctccccacttggtgtccactcctctggaggac
atcgacaccttctacagcaatcagaagaccttcatagtattgaatcgcgggaaggcaatc
ttccgtttcaacgccactcctgccttgtacatcttaaaccccttcaaccctctaaggagg
gtagccattagagttttagtacactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgaccctcagtaaccccccggaatgggccaagaatgtagagtac
acattcacagggatttacaccttcgagtcccttataaagatcctggccaggggcttctgt
gtggggaagttcactttcctgcgggacccgtggaactggctggatttcagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagccctgaaaactatatcagtcatcccaggcttgaagaccatcgtcggcgca
ctgatccagtcggtaaaaaagctgtcagacgtcatgatcctcaccgtgttctgcctcagc
gtcttcgccctcatcggcctgcagctcttcatgggcaacctgagacagaagtgcgtgcgc
ttgccagtcagcaccaacggcaccaacggcaccaacatcaccgcagacgacatgccgttt
ttcaacagcaccacgttcacgctgaatgccacggaaagcccgttcaactggacggagtac
atcagcgatgataataattactattacctccctggccgcagggacgctctgctctgtggg
aacggcagtggcgcagggctctgtccagagggcttcatatgcataaaagctggtcgtaat
ccagactatggctacaccagcttcgacaccttcagctgggcgttcctctctctgttccga
ctaatgacgcaggactactgggaaaacctctaccagcagactttgcgtgcagcaggaaaa
ccctacatgatcttctttgtgctggtgatcttcctgggctccttctacctggtcaacctg
atcttggctgttgtggccatggcttatgacgagcagaaccaggcaaccatcgaggaggcc
cagcagaaggaggaggagttccaggccatgctggagcagctgaagagacagcaggaggag
gctcaggttgccgcggcagcagccacggagagcggagagtacagcgggagagggggcccc
acctctgagtcctcctcggggacgtcgaagctcagctcgaaaagtgccaaggaacgacgc
aacaggcgcaagaagaggaagcagagggaggaggaggaggagaggggggcaagggacaag
ttccacaagtctgagtctgaggacagcatcaagaggtccagctttcgcttctctatcgat
gccaacaggctctcctatgagaagagatgctcctcacccaaccagtctctcctcagtatc
cgtggatccctcttctcacctcggaggaacagtcgagcgagcctgttcagcttccgaggc
cgtgcgcgagacatgggctctgagaacgacttcgccgacgacgagcacagcaccttcgag
gagagcgacagccgccggggctccctgttcttgccacgccgcctcgagcgccgctgcagc
gccatcagccagaccagcctcggggcgccaaggatcatgctgcccgccaacggcaagatg
cactgctccgtagactgcaatggtgtggtgtcgctggtcggtgggacttcagtaacaacc
tcccctgtaggtctcctgctgcctgaggggacaaccactgatactgagcttaagaaacgg
aggtcaggttttcaccagccatccatggattatttagatgaaccagggggcaggcagaga
gcaatgagtgtggccagtatactcaccaacaccatggaagagcttgaagagtcgagacag
aaatgccccccttgctggtatagatttgccaacaccgctctgatctgggactgttgccca
gcatggctgaaaatcaaggaggtagtcaacagtgtggtcatggacccatttgtggatctg
gctatcaccatttgtatcgtcctcaacacccttttcatggccatggagcattaccccatg
actacagagtttgctaacgtcctctcagttggaaacctggtgttcacgggcatcttcaca
gcagagatgtgctttaagatcatcgccctggatccctactactacttccaggagggttgg
aacgtctttgacggcatcattgtcagtctgagtctgatagagctcggcttggccaacgtg
gaaggcctctctgtgctcaggtccttcagattgctgagggtcttcaaactggccaagtcc
tggcccactctgaacatgctgatcaagatcattggtaactcagttggcgctctggggaac
ttgactctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttt
gggaagagctacaaggagtgtgtgtgtaagatctccgatgactgtcagctgcctcgctgg
cacatgcacgacttcttccactccttcctcatcgtgttccgggtgctgtgcggagaatgg
atcgagaccatgtgggactgcatggaggtggccgggcagagcatgtgcctgatcgtcttc
atgatggttatggtcattggaaacctggtggttctgaacctgttcctggctctccttctg
agctcattcagcgctgacaacctggcagcaacagacgatgacagtgagatgaacaacctg
cagatcgcagttggccggatccagcgaggcatcgcattcgtcaaaacaactgtgcggcat
ttcctccagagcctctgctttagtgggggtggtaagggctccggtctggctgaggagagc
aaacctctggatgagctgcacagcaacggcaagggcaactgcatctccaaccacacttca
gtggagatcaccaaagacccgagtggggtgtacatgacagaaggcaatggacggccagga
ggggggctggtagttggggtcgtggttggtggggacactacggggaagtacccaatggag
gaatgtgactacatgtcatttattcataaccccagcctgacagtcacggtgcctatcgct
gtgggcgagtcggactttgaaaacctaaacacagaagatttcagcagtgactcgtcggat
gtggagggcagcaaagagaagcttgatgcagagccccagcgtctgagttcatccgagggg
agcacagttgatattcggcccccaggagatggggtggattcagtggagcttgagccagaa
gagtcactcgacccagaggcctgcttcacagagggctgtgtacgcaggttccagtgctgc
cagatcaatgaggagggagcaaattataagagctggtggaatctcaggaaaacctgcttt
atcattgtggagcacaactggtttgaatcattcatcatattcatgatcctgctcagcagt
ggagcactggcatttgaggacatatacattgagcagcggaggaccatcaaaacagtgctg
gagtacgcagacaaggtcttcacttacattttcatcctggagatgctgttgaagtgggtg
gcatacggctttgtcaagtacttcaccaacgcctggtgctggcttgacttcctcattgta
gatgtgtcccttgtcagccttgtagctaatgctctaggctactctgagctcacagccatc
aaatctctgaggacgctgagagccctccggcccctgagggccctgtctcggtttgagggc
atgagggttgtggtgaacgctctgctgggggccatcccctccatcatgaacgtgctgttg
gtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgttcgcagggaag
tattactactgtgtcaacaccaccaacgacgaggtcttccccatcagtgtcgtcaacaac
atgacagaatgcctgaatttgataaacgacagcgcccgctggaagaatgtcaaaatcaac
tttgacaacgttggggccggttatctggctttgctgcaagtggccacatttaagggttgg
atggacatcatgtacgcagccgtggactctcgagatttggaagagcagcctgagtatgaa
gtcaacttgtacatgtacctctatttcgtcatcttcatcatcttcggctccttcttcacc
ctcaacctgttcattggcgtcatcatcgacaacttcaaccagcagaagaagaagtttgga
ggtcaggacatcttcatgacagaagaacagaagaaatactacaatgccatgaagaagctc
ggctccaagaaaccacaaaaacctatacctcggccgacaaatgcatttcaaggttgtgtg
ttcgactgcatcacgaagcaggccttcgacatcgtgatcatgatcctcatctgccttaac
atggtgaccatgatggtggagacggacgaccagacgtcagaaatggacaacatcctctac
tggatcaacctggtcttcatcgtgctcttcaccggggagtgcgtgctgaagatgatctcg
ctgcgtcactattacttcaccatcggttggaatatatttgactttgtggtggtgatcctg
tctatcgtaggtatgtttttgtctgaagttatcgagaagtactttgtgtccccaacgctg
ttccgagtgatccgtctggccaggataggccgaatccttcgccttatcaaaggtgccaaa
ggcatccggacgcttctcttcgccttgatgatgtcgctccctgccctcttcaacatcggc
ctcctcctgttcctggtcatgttcatttacgccatctttggcatgtccaattttgcctat
gtgaagcgcgaggcaggaatcgatgacatgttcaatttcgagacgttcgggaacagcatg
atctgtttgtttcagatcaccacctcagccgggtgggacggcctgctggcgcccatactg
aacaagagggagccggactgcgacagtcagatggagcacccagggaactattataaaggc
aactgtggcaacccgtcagtgggcatcttcttctttgtcagctacatcatcatctgcttc
ctcatcgtggtcaacatgtacatcgctgtcatcttggagaacttcagtgtggcgacggag
gaaagcgccgagccgctgagcgaggacgactttgagatgttctatgaagtgtgggaacgc
tttgaccccgacgccactcagttcatggagtacagcaagctctcggacttcgccgacgct
ctggatccaccgctgcgcatgcccaagccgaacatgatccagctcatctccatggacctg
ccaatggtgagcggcgagcgcatccactgcctcgacatcctgttcgccttcactaagcga
gtgttgggcgaaggcggcgaaatggacgtgctgcgcgggcagatggaggagcgcttcatg
gcctccaatccctctaaggtgtcgtacgagcccatcactaccaccctccgccgaaaacag
gaggacatgtcggccataatcatccagagagccttccgccgctacatgatccgcctggcc
atgaagaaagcctccgccctctataaggagaagctgaaggagggcatccgcgaccccgac
aaggacgtgatggtcatcagcaagttcacagagaactccacctcggacaaaatggacatg
accccctccacggcctccccgccctcctacaacagtgtgacgaaatcggacaaagacaaa
tacgagaaagaaaatagagaaaaggaaaacaaagggaaagacttgaaagacagaaagaaa
tag
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integrated database retrieval system
