Acanthopagrus latus (yellowfin seabream): 119015122
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Entry
119015122 CDS
T08233
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat00310
Lysine degradation
alat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119015122 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119015122 (setdb2)
Enzymes [BR:
alat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
119015122 (setdb2)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119015122 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119015122 (setdb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
119015122
NCBI-ProteinID:
XP_036946698
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All DBs
Position
24:complement(15276505..15283627)
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AA seq
635 aa
AA seq
DB search
MELVGQIEEAGQSSCGSTRTERAKTFWAGKDMDQVFTDVFDYLDHLKRVLQKNTATDKEY
VQGLKLLEVLDFSRPVSAQDSSVVQVVIGSGEVLPADFSPHSSSPSSPLPPPNGPPAGRE
ELLPPLTPVQLQYTLHTCCQACLSGVPSMPQSTPLFWGQNPLKVPLLCGFKRLTAVPLMS
SGGGKASDGEGLEDMGEWDVLYKAPCGRSLRNYDDVMRFLLATDSYDLLQVDFFTFNPSV
RLDIPPMVGPRKPEQDLSRGVEPTPVELCIGDGGARPPDFRYRKERWPHGCFLSRGPTLF
NVCCDCPDGCSDAQRCACVAMTRGGRHYSHYRLDEPVPSGVYECGPWCGCDRARCQNRLV
QRGIRVRLQVFQTDDRGWGVRCRDDLDCGTFVCIYAGVILRRARSPTKPPSPKLPRAELP
SDDEVEVVTEWLALPMVEGRSNRLEPTSPPLHVPVIQRPAESNVTTCTAQDREQTVLVGG
PAPPSPSAGGSGDQSPAQAVTVAMTTTNPEAAVVHGINGTETKSQKSLKRAMKVEDVNFL
DASKEGNVGRFINHSCQPNLFIQNVFTDSHDPAFPVIAFFTNRVVKAGTELTWNYSADAR
GKQEVTCLCGSSGCQGQFSVEKNLCDACEVDGETR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgtgggccagatagaagaggctggacagagctcctgtggatcaacacggaca
gaacgggccaaaaccttctgggccggcaaggacatggatcaggtctttactgatgtcttt
gactacctggatcacctgaagagagtcctgcagaagaacacggccacagataaagaatac
gttcagggcctgaagctgctcgaggttctggacttctctcgtccggtctcggctcaggac
tcttctgtggttcaggtggtcatcggctcaggtgaggtgctgccagctgacttctccccc
cacagctcctccccctcctcccccctgcctccccctaatgggccccctgcaggccgggag
gagctgctgcctcccctgacgcccgtccagctgcagtacacactgcacacctgttgccag
gcctgtctgtctggtgtacccagcatgcctcagtccacgcctctgttctggggtcagaac
cctctgaaggtgccgctgctctgcggttttaagcggctgacagcggtgccgctgatgtca
tcaggagggggcaaggcctctgatggggaggggctggaggacatgggggagtgggacgta
ctctacaaagcgccgtgtggacggagcctccgtaactatgacgacgtgatgcgttttctg
ttggccacagatagctacgacctcctgcaggtggacttcttcacctttaacccgtctgtg
cggcttgacatcccccccatggtgggcccccggaaaccagagcaggacctgagtcgtggc
gtggagcccacgccggtggaactttgcattggagacggtggcgcccggccgcccgacttc
cgctacaggaaggagcgctggccacacggctgcttcctgagtcgtggcccgacgctgttc
aacgtctgctgcgactgccccgacggctgcagtgatgcacaacgctgcgcctgtgttgcc
atgaccagaggagggcgccactacagccattacaggctggacgagcccgtaccgtcaggg
gtgtatgaatgtggtccgtggtgcggttgtgaccgggctcgctgtcagaaccggctggtc
cagagagggatcagagtccgcctccaggtctttcagactgacgaccgcggctggggtgtg
cgttgccgtgacgacctggactgcggcacattcgtttgcatatacgcaggtgtgatcctg
cggcgggcccggagtcccaccaagcctccctcccccaagctgccgagggcggagctcccc
tcagacgacgaggtggaggtcgtcaccgagtggctcgccctgcccatggtggaggggcgg
agcaaccgactggaacccacgtcgccccccctccatgtccccgtgatccagagaccggct
gaatccaacgtcacgacctgcacggcacaggacagggagcagacggtgttggttggaggt
ccagcacctccgtcgccctcagctggcgggtcaggtgaccagtctccagctcaggcggtg
actgtggccatgacaacaaccaatcctgaggcggcggtggtccatggcattaatggtacc
gagacaaagagccagaagagtttaaagcgagcgatgaaggtggaggacgtgaacttcctg
gacgccagcaaagagggaaatgtgggccgcttcattaaccacagctgccagccaaacctg
ttcatccagaacgtcttcaccgactcccacgaccccgccttccctgtcatcgccttcttc
accaacagggtcgtgaaggccggcacagagctcacctggaattactctgccgacgcgcgg
ggcaaacaggaagtgacctgtctctgcggcagcagcggctgccagggacagttcagcgtt
gagaagaacctgtgtgacgcgtgcgaggtggacggtgaaacacggtga
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