Acanthopagrus latus (yellowfin seabream): 119019741
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Entry
119019741 CDS
T08233
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04020
Calcium signaling pathway
alat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119019741 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119019741 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119019741 (grin1b)
Ion channels [BR:
alat04040
]
Ligand-gated channels
Glutamate (ionotropic)
119019741 (grin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
119019741
NCBI-ProteinID:
XP_036954468
EnsemblRapid:
ENSALTG00010000838
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All DBs
Position
5:complement(30860867..30897734)
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AA seq
973 aa
AA seq
DB search
MELRGVLLLTVLQLCSVARGGCEPRVVNIGAVLSQKRYEQVFKEAVTQANNLYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSPDTNLTSLLLEAKDLEARVII
LSASEDEAAAVYRAARQLNMTGSGYVWLVGEREMTGKALSEAPDGLLGLQLINGKNESAH
IADAVGVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRLIQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMSTR
LKIVTIHQEPFVYVKPTKTDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPTVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSRAEPESKTSFRS
ITSTSDLKRRRASGDATHHHLLADSSWPPVCQSAIFIWPPPSAHVSLRQTDRREETDEDR
QCPVRYVQSAVPD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgtggcgtgctgctgctcactgtcctgcagctgtgctcggtggctcgtggc
ggctgcgagcctcgggtggtgaacatcggcgctgtgctgagtcagaagcgctatgagcag
gtgttcaaggaggcggtgacgcaggccaacaacctgtacgggaaagacaagttcaagatg
aacgccatctcggtcacacacaaacccaacgccatccagatggctctgtcggtctgcgag
gacctcatctccaaccaggtgtatgcgatcctggtcagtcaccctcctcagtctaacgac
cacctgactccgacacctgtctcctacaccgccggcttctacagaatccctgtggtcggt
ctgacgacgcgcatgtccatctactctgacaagagcatccacctgtcgttcctgaggacg
gtgcctccgtactcacaccaggctcacgtctggttcgacttgatgagagagttcaggtgg
aaccacatcatcctgatcgtcagcgacgaccacgaaggacgagccgcccagaagagactg
gagacgctgctggaggagagagagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacctaaggcggagaaagtgctgctgttcagcccg
gacaccaacctgacgtcgctgctgctggaggccaaagacctggaggcccgggtcatcatc
ctgtctgccagtgaggatgaagctgctgccgtgtacagagctgctcgtcagctcaacatg
accgggtccggttacgtctggctggtgggagagagagagatgacgggcaaagctctgagt
gaagctccagacggtctgctggggctccagctgatcaatggcaagaacgagtcggcgcac
atcgcggacgccgtcggggtcgtggctcagtcactgcaggagctgtttgagaaggagaac
atcacggagccaccgcggggctgcgtgggaaacaccaacatctggaggactggaccgctc
ttcaaacgggtgctgatgtcatccaagtaccctgacggtctgactggacggattgagttc
aacgatgatggcgaccgacgtttcgccacctacagcatcctgaactaccaacagaagcca
ggtcgccttatccaggtcggagtcttcaatggatcacaggttgtgatgaaccctcagagg
aagatcatctggcccggaggagagacagagaaaccagttggataccagatgtcgacgaga
ctgaagattgtgacgatccatcaggagccgtttgtctatgtgaagccaacaaagactgac
gggacgtgtaaagaggaatacaccgtcaacggagtcctgatcaagaaggtgatctgtact
ggacccaacgggaccatcccaggtcagcccactgtccctcagtgttgctatggtttctgt
atcgacctgctcatcaagctggcgatgagcatgaactttacctacgaggttcacctggtg
gctgatgggaaatttggaacacaggagcgagtgaacaacagcaacaagaaggagtggaat
gggatgatgggggagctgctgggaggtctggccgacatgatcgtcgctcccctcaccatc
aacaacgagcgtgctcagtacatcgagttctccaaacccttcaaataccaggggctcacc
attctcgtcaagaaggaaatccctcgcagcactctggattcattcatgcagccgttccag
agcacactgtggctgttagtcggtctgtcggtccacgtggtggcagtgatgctttaccta
ttagaccggttcagcccgtttggaaggtttaaagtgaacagtgaagaagaagaagaagac
gccctcaccctgtcctctgccatgtggttctcatggggagtactgctgaactctgggata
ggagaaggagctcccaggagtttctcagcgaggattctgggtatggtgtgggcaggtttt
gctatgatcatcgtagcttcgtatactgccaacctggcagccttccttgtgttggaccgg
cctgaggagcgcatcactggcatcaacgaccccaggctgcgtaacccatcagataagttc
atctacgccacagtgaagcagagctcggtggatatctatttcagacggcaggtggagctg
agcaccatgtaccggcacatggagaaacacaactacgagagcgctgctgaggccatccag
gccgtcagagacaataagcttcatgccttcatctgggacagcgctgtgttggagttcgag
gcgtcgcagaagtgcgatctggtgacgacaggagagcttttcttccgctccggatttggg
attggaatgaggaaagacagtccgtggaaacagaacgtctctctggccattctcagctct
catgagaacggcttcatggaggatctggacaagacgtgggttcgataccaggagtgtgac
tcgaggagcaacgcccccgctaccctcacctttgagaacatggcaggtgtgttcatgctg
gttgccggtggcattgttgccgggatcttcctcatcttcatcgagatcgcctacaaacga
cacaaagacgctcgaaggaaacagatgcagctcgccttcgctgccgtgaacgtctggagg
aagaacctgcaggataggaaaagtagagcagagcccgagtccaaaacctcttttaggtcc
atcacttcgacctccgacctcaaacgccgtagggcctccggggacgccacgcaccatcat
ctccttgctgactcatcatggccgccggtctgtcagtcagccatctttatctggccgcct
ccatcggctcatgtgtccctcagacagacagacagacgagaggagacagatgaagacaga
cagtgtccggtccgatacgtccagtcagccgtacccgactga
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