Acanthopagrus latus (yellowfin seabream): 119031359
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Entry
119031359 CDS
T08233
Symbol
taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119031359 (taf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
alat01001
]
119031359 (taf1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119031359 (taf1)
03036 Chromosome and associated proteins [BR:
alat03036
]
119031359 (taf1)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
119031359 (taf1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
119031359 (taf1)
Protein kinases [BR:
alat01001
]
Serine/threonine kinases: Other
TAF1 family
119031359 (taf1)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119031359 (taf1)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
119031359 (taf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
119031359
NCBI-ProteinID:
XP_036975671
EnsemblRapid:
ENSALTG00010025331
LinkDB
All DBs
Position
13:6994300..7008268
Genome browser
AA seq
1962 aa
AA seq
DB search
MSDSDSDDEQGRPFSLTGFLFGNINEDGQLEDDSVLDNESKKHLAGLGTLGLGSLITEIT
ANEEEDQEEGRDSGSVDAAGWVKSTDDAVDYSDISEVAEDETKKYRQAMGSLQPSRKTDD
EDDYDADCEDIDSKLMPPPPPPTLPTSAKKDEPSPQNTNVGEEGDGIILPSIIAPSSTAD
KVDFSSSSDSESETDRPCQGMGAGGKPDSLTLPLAGIMQKDAAKALPGVTELFPEFRPGK
VLRFLRLFGPGKNMPSVWRSARRKKKRKHRDPQPGTPPPEGEPTEQSQEKTSGWIYEYAP
PPPPEQCLSDDEITMMAPVESKFSQTCGDGDKEAESRPKVAEWRYGPAQLWYDMLGVSED
GSNFNYGFKLKEKQSSEPEKQDAPQEIIEPVPEIIMQDSNDGDNSDNDEEDGDADKKKHA
LENELFLMVTQLQWEDDIIWNGEDIKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTR
SNSQLVPPTPPPMPKVSSISGSKREKNSHDSQASHEEDSPWFSIFPIDNEELVYGRWEDN
IIWDDQEMDHLLMPPVLTLDPNDENIILEIPNEKEEMTSHSPSKENKKETAIKKSRILLG
KTGVIKDEPQQVSRLIRNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALE
LRQPFFPTHMGPMKLRQFHRPTLKKYSFGALAQPGPHPVQPLLKHIKKKAKMREQERQAS
GGGDMFFMRTPQDLTGKDGDLILAEYSEEYAPLIMQVGMATKIKNYYKRKPGKDPGAPDC
KYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVLRTRHGYYIRELV
DIIVVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSH
SESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQR
LKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPT
GCGEGFSYVKVPNKPTQQKDDKEPQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEI
KKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVL
ESTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEE
SDRDNKGRKERRKGLSSALSTSSHKDDDTSSVTSLNSSATGKRLKIYRTFKDEDGKEYVR
CETVRKASVIDAYLRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKD
KIKGPPEKKAKKVKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQ
EEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVG
SAVHCDYLNKPHKAIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPVNAKVVKDYYK
IITRPMDLQTLRENVRKRMYPSREEFREAVEVIVKNSATYNGAKHPITQVAQSMLDLCDA
KLKEKEDRLVRLEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPD
YYKVIINPMDLESIRKNISKHKYQNRDAFLSDVSHIHTNSIKYNGADSPYTKTALEIVNV
CKQTLAEYDEHLTQLEKDISTAKEAALDAADLECLDPMTPGPYTPQGRHLRRPGEEESDV
DIEGFEEEDDGKPKTPAPAEDADGDLEDDDDEEEMLLPLRRRLHDQEEEEEEEEDDGRSN
RPAQASVLYQDLLMSDGEDDASEEEGDNPFSSIHLSESGSDSDREVDVRPAPPRRAQDTA
RMGMEQDESMMSYEGDGPDEPHMEDSNVSYGSYEETESRSQMQPSSMGNGEEYGISEEEE
EDEEDEARRRGPAVLSQVQLSEDEESEEFRSIGGDSDMDSDN
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactccgacagtgacgacgagcaaggtcgccctttctctctaactggcttcctc
tttggaaacatcaacgaggatggacagctagaggatgacagcgttctggacaatgagtcc
aaaaagcatttggctggtttgggtactctgggtctgggctcactcatcacagagatcact
gccaatgaggaggaagaccaagaggaaggcagagactctggtagtgttgatgcagcaggt
tgggtgaaaagtactgatgatgcagttgattattctgacatcagtgaggtcgctgaggat
gagacaaagaagtatcggcaggccatggggtctctgcagcccagcaggaaaacagatgat
gaggatgactacgatgcagactgcgaggacattgattccaagctcatgcctcctccacca
ccaccaactcttccaacatctgctaagaaagatgaaccctcccctcagaacacaaatgtt
ggagaagagggtgatggcatcatccttccctccatcattgcgccatcctctactgctgat
aaggttgactttagcagctcctcagactctgagtcagaaactgaccgtccctgtcagggc
atgggggctggaggaaaaccagatagtctcaccctccctcttgctggcatcatgcagaaa
gatgctgccaaagcactgccaggtgtcacagagcttttcccagagttcaggcctggaaag
gtgcttaggttcttacggctgttcggtcctggaaagaacatgccatcagtttggaggagc
gcccgcaggaagaagaagcggaagcaccgagaccctcagccggggacccctcctccagaa
ggagaacccaccgagcagagtcaggagaagacatctggatggatttacgagtacgccccc
cctccacccccggagcagtgtctctctgatgatgagataaccatgatggctccagtagaa
tcaaagttctcgcagacttgtggtgatggagacaaggaggccgagtctcgacctaaagta
gcagaatggagatacggtccagcccagctgtggtacgatatgctcggcgtctctgaggat
ggaagcaacttcaactacgggttcaagctaaaagaaaagcagtccagtgagcctgagaag
caagacgcacctcaagaaataatagagcctgtcccagagattataatgcaagacagcaat
gatggagacaacagtgataatgatgaagaagatggagatgccgataagaagaaacacgcc
cttgagaatgagctcttcctgatggtcactcaactgcaatgggaggacgatattatctgg
aatggggaggatataaaacacaagggcaccaagactcagcgagccagtttggcagggtgg
ctgccttctagcatgacccgcaatgccaatgcatataatgcacaacagggtctgacaaga
agtaattcccagttggtgccaccgacgcctccacccatgcccaaagtttcttcaatctct
ggctctaaacgagaaaaaaatagccatgatagtcaagcctctcatgaagaagactctccc
tggttctccatcttccccatcgacaatgaggagctggtgtacggtcgctgggaagataac
attatctgggatgaccaggagatggatcacctgctcatgccacctgttctcacactggat
ccaaatgatgaaaatattatcctagagattcccaatgaaaaggaggagatgacgtcgcac
tccccatcaaaggagaacaagaaggaaacggcaatcaaaaagagtcgaatcctgctgggc
aaaaccggagtcattaaagacgagccacagcaggttagccgcctcatcaggaacatgtcc
cagcctgaagtgaaggacccctggaacctctccaatgatgaattctactatcctaaacag
cagggcctgagggggaccttcggtggcaacatcattcagcactccatcccggcgctggag
ctgaggcagcccttcttccccactcacatgggacccatgaagctgcggcaatttcatcga
ccgactctgaagaagtactcgtttggagctttggctcagcccggtccccatcctgtccag
ccgctgctcaaacacataaagaagaaggccaagatgcgcgagcaggagcggcaggcgtca
ggaggtggagacatgttcttcatgcgaactccacaggacttgacaggcaaagatggagat
ctgatcctggctgagtacagtgaagaatatgctcctctcatcatgcaagtcggcatggcc
accaagataaaaaactactacaaaaggaaacctggaaaggatcctggagcacccgactgt
aaatatggagagactgtgtactgccacacatccccgttcctgggttctctgcatcctgga
cagctgctccaggcttttgaaaacaatcttttccgcgctccaatctacctgcacaagatg
ccagaaactgatttcttggtcctgcgaacgcgacacggctactacatacgagagcttgtg
gacattatcgtagttggtcaggagtgcccgttgtatgaggttccaggtcccaactccaaa
cgagcaaacactcacatccgagacttcctacaggtgttcatctaccgcttgttctggaag
agcaaagatcggccccggaggatccgcatggaagatataaagaaagcgttcccctctcat
tcagagagcagcatcaggaaacgactaaaactctgtgctgacttcaaacgtacagggatg
gactctaactggtgggtgctgaagcctgacttcagattgcctacagaggaggagatcagg
gccatggtctctccggagcagtgctgcgcttactatagcatgctggtggcagagcagagg
ctcaaggatgctggatacggggagaaatccttctttgctccagaggaagagaacgaggag
gactttcaaatgaagattgatgacgaggtgcggacagctccgtggaacacaacaagggcc
ttcatttctgccatgaaggggaagtgcctgttggaggtcacaggtgtggctgaccctaca
ggctgtggagagggtttctcttatgtcaaagtgccgaacaagcccactcaacaaaaggat
gacaaagagccacagcctgccaagaagacagtgacgggaacagacgctgacctgaggaga
ctctcgctgaagaatgccaagcagctgctgcgcaagtttggtgttccagaggaagagatc
aagaagctctcacgttgggaggtgattgatgtggtgagaaccatgtccacagagcaggcg
cgttcaggtgagggacccatgagcaagttcgccagaggctctcgtttctctgttgccgaa
caccaggagcgctacaaagaggaatgccagaggatctttgacctgcagaacaaagtgttg
gagtcgacggaggtgctctccacagacactgacagcagctcagcagaggacagcgacttc
gaggagatggggaagaatattgagaacatgctgcagaacaagaagaccagctcacagctt
tcccgcgagagggaagagcaagagcgcaaggaactgcagaggatgctgatgggcgaggag
agcgatcgtgacaacaagggccgcaaggagcggcgcaaaggcttgtccagcgccttatcc
accagctcccacaaggatgacgacacgtcctccgtcaccagcttgaactcctcggccacc
gggaagcgactgaagatctatcgcaccttcaaggatgaggacggcaaagaatatgtccgc
tgtgagacagtacgcaaggcgtcagtcatcgacgcctacctcaggatcagaaccaccaag
gatgatgaattcatacggaagttcgccctcttcgatgagcagcacagagaggagatgagg
aaggagcgccggcgtattcaggagcagctgaggaggctgaagagaaaccaagagaaagac
aagatcaagggacccccagagaagaaggccaagaaggtcaaagagagaccagacctcaag
gtaaaactaaagtgcggcgcatgtggagccatcggacacatgaggaccaacaagttctgc
ccgctatactatcagaccaacgcccctccttctaacccagtcgccatgacagaggagcaa
gaggaggagctggaaaaaacggtcatccacaatgacaatgaggaactgatcaaggtggag
ggcaccaagatcgtgctgggcaaacagctcatcgagagtgctgatgaggttcgcaggaag
tccttagtgctcaagttccccaagcaacagctcccaccaaagaagaagagacgtgtaggc
agcgctgtgcactgcgattacctcaataaaccacacaaggccatccaccgcagacgcact
gaccccatggtgaccttgtcttctgtgctagagagcatcatcaatgacatgcgggatcac
cccaacacgtatcccttccacacaccagtcaatgccaaggtggtgaaggactactataag
atcatcacgcggcccatggacctgcagacgctgagggagaatgtacggaagcgaatgtac
ccatctcgggaggagttccgcgaagcagtggaagttatcgtcaaaaacagcgccacctac
aatggtgcgaaacatccgataacacaagtagcacagtccatgctcgacctgtgcgatgct
aaattaaaagagaaagaggacaggctggtgaggctggagaaagccatcaaccccttgctg
gatgacgatgatcaggtggccttctccttcatccttgacaacatcgtgacccagaagatg
atggtggtgcctgattcctggccgtttcaccatcctgtcaacaaaaagtttgtgcccgat
tattataaggtgatcataaaccccatggatctggagagcatccgcaagaacatctcgaaa
cacaaatatcagaatcgagatgcattcctgtcagacgtcagtcacatccacaccaacagt
attaagtacaatggtgccgacagtccgtacaccaagacagccctggagattgttaatgtg
tgcaagcaaaccttggcagagtatgacgagcacctgacccagctggagaaggacatctcg
actgctaaagaagcagctcttgatgcagcagacttggagtgtttggacccaatgacacct
ggaccgtacacaccgcagggtcgacacctcagaagacccggggaggaagagtcagatgtg
gatattgaaggctttgaggaggaggatgatggcaaacccaagactcctgctcctgcagag
gacgcagacggagatctagaggacgatgatgacgaagaggagatgttgctgccgctgcgc
agaaggttgcatgaccaggaggaagaggaggaggaggaagaagacgacggaaggtcgaac
cgcccggctcaggccagcgtgctctaccaggacctgctcatgtctgacggagaggacgat
gccagcgaagaagaaggcgacaaccctttctcctccatacacctgtcagaaagcggtagc
gactctgacagagaggtggatgtgcgacctgcgcctccacggagggctcaagacacagct
cgcatgggcatggagcaggacgagagcatgatgtcatatgaaggcgacggacctgacgag
cctcacatggaagacagcaatgtcagttacggcagctacgaggagacagagagccggagt
cagatgcagccctctagcatgggcaacggagaagagtacggcatcagcgaggaggaggag
gaagatgaagaggatgaagctcggaggagaggcccagctgtgctctcccaggtccagctc
agtgaagacgaagagagcgaagagttcagatctataggaggagacagtgacatggactcc
gacaactag
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integrated database retrieval system
