Acanthopagrus latus (yellowfin seabream): 119033692
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Entry
119033692 CDS
T08233
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119033692 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119033692 (polr1b)
Enzymes [BR:
alat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119033692 (polr1b)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119033692 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
119033692
NCBI-ProteinID:
XP_036979985
EnsemblRapid:
ENSALTG00010012128
LinkDB
All DBs
Position
15:14287286..14294035
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSEKWSNLAECPSLKNLTEERFGVLKESQHGAVQDLTKAHIESFDQAVTDGLSRVVQS
ISPLEFTFKNDRISLSFVEATIYNPVVAKGSICRDMKVFPAECRGRRCSYKGKLVADVSW
SVNGVPKGIIKQSMGQLPIMVKSKLCNLHGMSPKELVAHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVREEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCVSEMLRIVMEEGCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCAHFLLNECICIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERLAAWLASVKLSFDKKGSRISGGWSAENMIKIF
NMGTDLTKPFEYLLATGNLNSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTLPTISLPALLCSLGVT
PVDGSPGKAFSDCYPVVLDGAVVGWVETELAPVVVESLRRFKVLREKKVPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVRNLALGKQELIGTFEQLYINVGIMEDEIESGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPTMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVKGDDSVVFGTKPGDPKVNDKLDADGLPHIGSTLQYGDPFYSYINLNTGQTYVIFY
KSQEACVVDNIKICSNDTGSGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESSALEY
FGKMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSATRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcagaaaagtggagtaatctggccgaatgtccgagtctgaagaatctgaca
gaggaaaggtttggcgtcctgaaggagtctcaacatggcgccgttcaggatttaaccaaa
gctcacatcgagtcgtttgaccaggctgtcactgacggactcagccgcgttgtgcagtcc
atctcccccttggagttcacgttcaaaaatgacaggatcagcctctcgttcgtggaagcc
accatctacaacccagtggtcgctaaagggagcatctgcagggacatgaaggtgtttcca
gcagagtgcaggggaaggagatgttcgtataaaggaaagcttgtggcagacgtcagctgg
tcggtcaatggcgttcccaaaggcatcatcaaacagtccatgggtcagctaccgatcatg
gtgaagtcgaaactgtgcaacctgcatggcatgtcccccaaagagctggtagcacatcac
gaagaagcagaagaaatgggaggttatttcatcgtgaatggaattgagaaagttattcgt
atgctgataatgccaaggaggaactatcctattgccatgtcaagacctaagtggaagagc
agggggcagggatacactcagtacggtatttctatgcgctgtgtgagggaggagcacaca
gccatcaacatgaacctacattatctggaaaacggaactgtgatgctgaacttcatctac
caaaaagagctcttcttcctcccactaggctttgcactcaaggccctggtggacttcaca
gacttccagatctaccaggagctgatcaaaggccgtgaggacaattccttctacaagagc
tgtgtgtcagagatgctgcgcatcgtcatggaggagggctgcaccacccgcagcaaggtg
ctgaattacctcggagagcgcttcagggttaagatgaaccttcctgagtggtacacaaac
gagcagtgtgcacacttcctgctaaacgagtgcatctgtatccacctgaagtcagatgtg
gagaagttctacctgctgtgtctgatgaccaggaagctgttcacgtttgccaagcaggag
tgcatggaggaaaaccccgacagcatcatgtgtcaagaagtgctcactcctggtcagctg
tacctcatgtttctgaaggagagactggctgcctggttggcgtctgtgaagctgtccttt
gataagaaaggcagcagaataagtggaggatggagcgctgaaaacatgattaagattttc
aacatgggcactgacctgaccaaaccctttgaatatctgctggccactgggaacctcaac
tccaagacaggtctcggcatgctgcagaacacaggtctgtgtgttgtagctgacaagctc
aacttcatccgctacctgtctcacttccgctgcgtgcacagaggagcagcgttcgccaag
atgagaaccacatctgttcgaaagctgctcccggagtcctggggcttcctgtgtcccgtc
cacacgccagatggagagccttgtgggctcatgaaccacatgacagccagctgtgagatt
gtggcaccgaccctgccgaccatatccctgcctgctctgctctgttccctcggtgtgact
ccagtggatggatctcctggcaaagccttttcagactgctaccctgtggtcctcgatgga
gctgtagtaggctgggtggagactgaattagctcctgttgtggtcgagtcactgcgcagg
tttaaggtgttgcgagagaagaaggtccccccctggactgagattgttctggttccaaaa
acgggcaaggccagcttgtacccgggcctgttcctcttcacaacaccctgtcggatggtg
cggcctgtgagaaacttggctctcggcaagcaagagttgataggcacctttgaacaactt
tacatcaatgtgggcatcatggaggatgagatcgagtccggagtgaccacacaccaggag
ctcttccctcacagtatgcttagcgtggtggccaatttcatcccttactcagatcacaac
cagagtcctaggaacatgtaccagtgtcagatgggtaagcagacgatgggtttccccctg
cactcattcatggatcgctcagacaacaagctgtaccggctccagacccctcagagcccc
ctcgtgaggcccaccatgtacgaccactacaacctggacaactaccccagcggcaccaac
gccattgtggctgtcatatcctacacaggctacgacatggaagatgccatgatcgtgaat
aagtcatcatgggagagaggctttgctcatggaagcatctacaagactgagctggtggac
ctggcagacaaggtcaagggagatgacagcgtggtgtttgggactaagccaggtgaccct
aaagtaaatgacaaactggatgccgatggactaccacacattgggtcaacacttcagtat
ggagaccccttctacagctacatcaacctcaacactggccagacctacgtcatcttctac
aagagccaagaggcctgtgttgttgacaatataaagatctgcagcaacgacactggctca
ggccggtttaaacgtgtctgcatcacagttcgagtgccacgaaaccccaccatcggcgac
aagttcgccagccgacacggtcagaagggcatcttgagccgcctgtggccggccgaggac
atgcccttcacagagagtggcatgagtcctgacatcctgttcaatccccacggcttcccc
tcccgtatgaccatcggaatgctgatcgaaagcatggcaggcaagtctggcgccctgcac
ggcctgagccacgacgccacacccttcaccttctcagaggagagctccgcgctcgagtac
ttcggtaaaatgctccgggcaggtggatacaactactacggcacagagcggctctacagt
gggctgagtggtcaggagctggaggccgacatattcattggagtcgtctactaccagcgc
ctgcgccacatggtctctgataagtttcaggtgaggaccacaggagcacgagacaaggtg
accaaccaaccagtgggagggaggaatattcagggaggcatccgttttggggagatggaa
cgggatgccctgctggcacatggctcttctttcctgcttcatgatcgcctcttcaactgc
tcagatcgatcagtggctcaggtgtgtgttgactgtggtagcctgctttccccgctgtta
gagaaaccgccaccctactggtcggccacacgccaccgaaagactgtctgcactctgtgc
ggtaaaagtgactctattgactcagtatctgttccttacgtcttccgctactttgtagct
gaactcgcagcaatgaacatcaaagtcaaattagatgttaaatga
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