Alistipes sp. dk3624: GFH31_08830
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Entry
GFH31_08830 CDS
T06260
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald03030
DNA replication
ald03410
Base excision repair
ald03420
Nucleotide excision repair
ald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH31_08830 (polA)
03410 Base excision repair
GFH31_08830 (polA)
03420 Nucleotide excision repair
GFH31_08830 (polA)
03440 Homologous recombination
GFH31_08830 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ald03032
]
GFH31_08830 (polA)
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_08830 (polA)
Enzymes [BR:
ald01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH31_08830 (polA)
DNA replication proteins [BR:
ald03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GFH31_08830 (polA)
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GFH31_08830 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFH31_08830 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QGA23927
LinkDB
All DBs
Position
complement(2083572..2086412)
Genome browser
AA seq
946 aa
AA seq
DB search
MKKLFLIDAYALIFRFYYAFIGRPMRNADGVNTSAVFGFVRYINEIIRRENPHYLGVAFD
PPGGNFRHELFADYKANRGETPEDIIVSVPYIKEFLEAMRIPVIEVPGYEADDVIGTLSR
EAAEAGFEVFMVTPDKDYGQLIRPNVYIYKQRKGGNEGVEIIGCEQVCEHYGIDDPKQVI
DILALWGDASDNIPGVPGIGEKSAVKLICQYGTVENLLDNTEKLSGKQRENIERLREQIL
LAKRLATIEQHVPVAFEPEKMVMESPDADRLAEVFQELGFRSLLQEMRQGHPDAGIPTDG
KPARPKSGVSPSAPQTTGAPNLFSALEQTAGGSSGQADLFGANTYETIDTVAHTYHIVET
QQALEALRDRLAAVREFCFDTETTGFNVFGDRLVGISVAVEPHEAWYIPCNPENTKRIID
TLRPVFEDERIAKIGQNVKFDIMMLRSAGTEVRGMLYDTMIIHYLLDPESRHGMDHLART
LLNYSPVPIEELIGKGVRQITMDRVPIEKAAAYAAEDADVTLRLQLRLWPQLQQAGLEEL
YRTIEEPLIRVLADIEMTGVKIDAETLAASGRELSGQLVGLEERIRELCGDPSLNVNSAK
QLGEALFARLKIDPNPRKTKTKQYRTDEEYLQMLSDRHPVVGLILEYRGLRKLLSTYVEA
LPQLINPQTGRIHTSFNQAVTATGRLSSTNPNLQNIPVRDEQGREIRKAFVPSDDEHLLL
SADYSQVELRLMAHLSGDAVMIDAFAHDADIHTATAARIFGVAPADVTREQRRQAKTANF
GIIYGISAFGLAQRLQIPRTEAKAIIDGYFATFPGVKKYMEDVVSKARETGYVSTLFGRK
RMLPDIRSGNAVVRGLAERNAINAPIQGGAADIMKLAMIAVHRELRERGLLSRIILQVHD
ELVIDLLKSEEDEVRELVVRCMENAARLKVALIADCGIGKNWVEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactattcctgatcgacgcttacgcgctgatattccgattctattacgcattc
attggtcgtccgatgcggaacgccgacggcgtcaacacctcggctgttttcggcttcgtc
cgctacatcaacgagatcattcgccgcgaaaacccgcactacctcggcgtggcgttcgat
ccgccgggcggcaatttccggcacgaactgttcgccgactacaaagccaaccgcggcgaa
acgccggaggacatcatcgtctcggttccgtacattaaggagttcctcgaagcgatgcga
atcccggtgatcgaagtccccggatacgaagccgacgacgtgatcggcacgctgtcgcgc
gaagcggccgaagccggattcgaagtgttcatggtcacaccggacaaggactatggccag
ttgatccgtccgaacgtctatatctacaaacaacgcaaaggcggcaacgaaggagtcgaa
atcatcggctgcgaacaggtctgcgagcactacggcatcgacgacccaaaacaagtaatc
gacattctcgcgctgtggggcgatgcctcggacaacatcccgggcgtgccgggcatcggc
gagaagagcgccgtgaagttgatctgccagtacggtacggtcgagaacctgctcgacaat
accgaaaaactctccggcaaacagcgggagaatatcgaacgattgcgcgaacaaatcctg
ctggccaaacggctggcgaccatcgaacagcacgttccggtggctttcgaacccgaaaaa
atggtcatggaatcgccggacgccgaccgtctggccgaggttttccaggaactgggtttt
cgctcgctgctgcaggaaatgcggcaaggacatcccgacgccggcattccgacggacggc
aaacccgcgcggcccaaatccggcgtttcgccttccgctccccagacgaccggggctccg
aacctgttctcggcgctcgaacaaacggcaggcgggagttccggacaggccgacctgttc
ggcgcaaacacctacgaaacgatcgacaccgtcgcgcacacctaccacatcgtcgaaacg
cagcaagcgctcgaagcgctgcgcgaccggctcgccgccgtccgtgaattctgtttcgac
accgaaaccaccggcttcaacgtattcggcgaccggctggtcggtatttcggtcgccgtc
gaaccgcacgaagcctggtacatcccgtgcaacccggaaaacacgaaaagaatcatcgac
acgctacgcccggttttcgaagacgagcgaatcgctaaaatcgggcagaacgtcaaattc
gacatcatgatgctgcgcagcgccggcaccgaggtgcgcggtatgctttacgacacgatg
attatccactacctgctggaccccgaatcccggcacggcatggatcacctcgcccgcacg
ctgctgaactattcgccggtaccgatcgaagagttgatcggcaaaggggtccgccagatc
acgatggaccgcgtgccgatcgaaaaagcggccgcttacgccgccgaagacgccgacgtg
acgctgcggctgcaactgcgcctatggccgcagttgcaacaggccggactcgaagaactg
taccggacgatcgaggaaccgctgatccgcgtgctggccgatatcgagatgaccggcgta
aagatcgacgccgaaacgctggcggcctcgggccgcgagctctccggacaacttgtcgga
ctcgaagaacgcatccgggaactgtgcggcgatccgtcgctgaatgtcaactcggccaaa
caactgggcgaggcgctgttcgcccggctgaagatcgacccgaacccgcgcaagaccaaa
accaaacaatatcgcaccgacgaggagtacctgcagatgctctccgaccgccacccggtc
gtcggactgattctcgaataccgcggcctgcgcaagctgctttcgacctacgtcgaagcg
ctgccgcaactgatcaatccgcagaccggacgcatccacacctcgttcaaccaagccgtc
accgcaaccgggcggctcagttcgacgaacccgaacctgcaaaacatcccggtgcgcgac
gaacagggccgcgagatccgcaaggcgttcgtaccgtcggacgacgaacacctgctgctc
tcggccgactattcgcaggtcgaactgcggctgatggcgcacttgagcggcgacgcggtc
atgatcgacgccttcgcgcacgatgccgatatccacacggcgaccgccgcgcgaatcttc
ggcgtcgctccggccgacgtaacgcgcgaacagcggcggcaggccaaaacggccaacttc
ggcatcatttacggcatctccgctttcgggctcgcccaacggctgcaaattccgcgcacc
gaagcgaaagcgatcatcgacggatatttcgccaccttcccgggcgtcaaaaaatacatg
gaggacgtggtaagcaaagcccgcgaaaccggctacgtcagcacgctgttcggacgcaag
cggatgctgccggacatccgttcgggcaatgcggtcgtccgcgggctggccgagcgcaac
gcgatcaacgccccgatccagggcggcgcggccgacatcatgaaactggcgatgatcgcc
gtacaccgcgagttgcgcgaacgcggactgctgtcgcgcatcatcctgcaggtacacgac
gaactggtcatcgacctgctgaaaagcgaagaagacgaagtgcgcgaactggtcgtccgt
tgcatggagaacgccgcgcgactcaaagtagcgctgatcgccgactgcggtatcgggaag
aactgggtcgaggcccattga
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