Algoriphagus sp. NBT04N3: GYM62_20165
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Entry
GYM62_20165 CDS
T09623
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00020
Citrate cycle (TCA cycle)
algo00785
Lipoic acid metabolism
algo01100
Metabolic pathways
algo01110
Biosynthesis of secondary metabolites
algo01120
Microbial metabolism in diverse environments
algo01200
Carbon metabolism
algo01210
2-Oxocarboxylic acid metabolism
Module
algo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
algo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GYM62_20165
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GYM62_20165
Enzymes [BR:
algo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
GYM62_20165
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Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QYH41003
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Position
4644364..4647150
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AA seq
928 aa
AA seq
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MDKFSYIANAHVSYIDELYNSYKQDPESIDPSWKEFFDGFDFALTNYGEGENGQAAESTA
STPKNGSLATPGTIMDMEQLPKEIKVRALIHAHRSRAHLRSKTNPVRERRDRKALIDPDD
FGLGQDDMNTEFQAGNEIGIGKSKLSAIIDALKTIYEGPMGFEYLYIRDPEMLDWFKTKV
EKEALAFNPSTDEKKRILFKLNQAVVFENFLHTKYLGQKRFSLEGGESTIPFLDAVINTA
ALGGVEEVMIGMAHRGRLNVLANVMGKTYEQIFSEFEGTAKPDLTMGDGDVKYHMGYSSD
IVTPEDKKVHLKLAPNPSHLEAVNPVVEGFIRAKIDSEHKGDKTKALPILIHGDAAVAGQ
GIVYEVTQMAGLKGYNTGGTIHFVINNQVGFTTDFDDARSSIYCTDVAKIIDAPVIHVNG
DNAEAVVFAAKLAAEFRQKFGRDIFVDMVCYRRHGHNESDEPKFTQPELYNIISKHPNPR
EIYVKRLTERGDIDAEIASQMDEEFRQLLQDRLNMVKEKPLPYQATKFEREWGSLRRSKP
EDFDQSPETGVDAKVIDQVAEALTTIPKGFKPIKQIEAQMKQRKDMFFKSKSLNWASAEL
LAYGSLLLEGKTVRLTGQDVQRGTFSHRHAVLHDANSNQPFNSLKEMKDRKGQFHIYNSL
LSEYAVLGFEYGYGMANPHSLTIWEAQFGDFANGAQTMIDQFISSGESKWQKQNGLVMLL
PHGYEGQGPEHSNARPERFLQLSAEYNMVVANITEPSNFFHLLRRQLAWEFRKPCVVMSP
KSLLRHPKVMSPIDEFTSGKFRELIPDTTVNTKDVKRVVLCTGKVYYDLEEAREKEKVKN
VALVRIEQLHPLPKKQIFETLKQYKDAEVVWVQEEPENMGYWNYMLRLLHKELPMDVIAR
KMSASPATGYNKVHVEEQKAIVSKALKL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattctcatacatcgccaacgctcatgtttcctatatagatgagctctataat
tcctacaaacaagacccagaatccatagatcctagctggaaagaattttttgatggattt
gattttgccctaaccaattacggtgaaggtgaaaatggccaggctgcagaatctactgca
tcgactcctaaaaatggttctttggctactccaggtacaattatggacatggagcagctt
ccaaaagaaattaaagttagggctctaatccatgcgcacagatcaagagctcacttaaga
tctaaaacaaacccagttcgggaaagaagagatagaaaagccctgattgatccagatgat
tttggtttgggtcaagatgatatgaataccgagttccaagcgggtaatgaaattggtatc
ggaaaatcaaaactctctgcgataatagatgcacttaaaaccatctatgagggtccaatg
ggtttcgaatatctctacatcagagatcccgaaatgctggattggtttaaaaccaaagtt
gagaaggaagctttagcctttaatccatccactgatgaaaagaaaagaatcttatttaaa
ctcaaccaagctgttgtttttgaaaactttttacacaccaaataccttggacaaaagcgt
ttttctttagagggcggtgaaagtactattccattcttagacgctgtaataaatacagct
gctctaggaggtgtggaagaagtaatgataggtatggctcacaggggaaggctaaatgta
cttgctaatgtaatgggaaagacctatgagcagattttctctgaatttgagggtacagcc
aagccagacctaactatgggagatggggacgtaaaatatcatatgggttactcctctgat
atcgttactcctgaagacaagaaagttcacttgaagttggctcccaatccatcacactta
gaggcagtcaatcctgtggttgaaggatttatcagggcaaaaatcgattcagaacataag
ggtgataaaaccaaggcactccctattttgattcatggggatgctgcagtagcgggtcaa
ggtattgtgtatgaggtgactcagatggctggtttgaaaggctacaacacgggaggaacc
attcactttgtcatcaacaaccaagtaggttttactactgattttgatgatgcaagatct
tctatctattgtacagatgtagctaaaatcatcgatgctccggtaattcacgttaatggt
gataatgcggaagcagtagtcttcgcggcgaagttagctgcagaattcagacaaaaattt
ggtcgggatattttcgtggatatggtttgctacagacgtcatggtcataatgagtctgat
gaacctaaattcactcaacccgaactttataatatcatctccaagcatccaaaccctaga
gagatttacgtgaagcgattgaccgaaagaggggatatcgatgccgaaattgcatctcaa
atggatgaggagtttagacaacttctacaagatcgtctaaacatggttaaagaaaaacca
cttccttatcaagctactaagtttgaaagagaatggggtagcttgagaagatccaagccg
gaagactttgatcagtctccagaaacaggagttgatgccaaagtaattgatcaagtggcc
gaagcattaaccaccattccaaaaggcttcaagccaattaagcagattgaggctcaaatg
aagcagagaaaagatatgttcttcaagtccaagtcattgaactgggcttctgctgaatta
ttggcttatggatctctattacttgagggaaaaactgtaagacttacaggtcaggatgtg
caaagaggtacattctcccacagacatgcagtattacacgatgccaattccaatcagcct
ttcaattctttgaaagaaatgaaagatagaaagggacaattccatatttacaactctctc
ctttcagaatatgctgttttgggatttgagtacggatatggcatggctaatccgcattca
ttgaccatttgggaagcgcagtttggtgattttgcaaacggagcccaaaccatgattgac
cagtttatttcctccggtgaatccaagtggcaaaagcaaaatggactggttatgctactt
cctcatgggtatgaaggacagggtccagagcactctaatgcgagaccagaaagatttttg
cagctttctgctgaatataatatggtggtggctaacatcaccgagccatccaacttcttt
catttattaagaagacaattagcttgggaatttaggaagccatgcgttgtgatgtctcca
aaatccttgttgcgtcaccctaaggtaatgtcacctatagatgaatttacttcgggtaag
tttagagaattaattcctgatactactgtaaacaccaaggatgtgaagcgagtggtcttg
tgtactggtaaagtatactatgacctagaagaagcgagagagaaagaaaaagtgaagaat
gtagcgcttgttcgtattgaacaactacatccactgcctaaaaagcagatttttgaaaca
ttgaagcaatacaaagacgcggaagtagtatgggttcaggaagagccagaaaatatgggc
tactggaattatatgttgagacttctgcataaagaacttccaatggatgtgattgccaga
aagatgagtgcatctccagctaccggatataacaaagtccatgtagaagaacaaaaagca
attgtttccaaagcattaaaactgtaa
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