Austrofundulus limnaeus (annual killifish): 106516530
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Entry
106516530 CDS
T06063
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106516530
04020 Calcium signaling pathway
106516530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106516530
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106516530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
106516530
NCBI-ProteinID:
XP_013862389
UniProt:
A0A2I4B3R2
LinkDB
All DBs
Position
Unknown
AA seq
2511 aa
AA seq
DB search
MTDGEGRVRFQYDECQEQGEVQDDVRVSIRSEPQGHDADPGGGQGEEKKKEKETDEEVVV
VQKRKRSCSGPGEGAEWSAEVHEEKEPEAEAGPTLGVRITAPIRDPDCVSEDEEQQPYPA
LAPVAFFCLKQTTRPRNWCLRMVCNPWFEHVSMLVILLNCVTLGMFQPCEDVTCLSEWCR
ILQVLDDCIFAFFAVEMVIKMVALGIFGSNCYLGDKWNQLDFVIVMAGVMEYSLDGHNAS
LSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAG
LLRNRCFLGEDIKTMYNLSINPYYMSEEGEDSPFICSAPRENGMLRCHSVPPYVEGRLEC
SLAAPLQSSALIGSSPGVGGASVNGCVNWNQYYNICRPGELNPHKGAVNFDNIGYAWIAI
FQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENA
LMREQRARFMSNDSTLASYSEPGSCYEEMLRYISHLYRKFRRRLQRMYYGWHSKRRKKVN
PNGSGCGSNGGGNGHGQGSSRVSGPGTAIWLRPIHNLLQNHQHQHCRLSNGGQHTVSVMS
TEHMDKEGTGEELEMKVREGSTNGNGGDNPTVVTQGVGSLLGRLNGGMNYPTILPSFVCS
YSSKTPPSHSKQSGRSPEQRPPTSEHTEXLAKLYQLMGQHSCQGLLFQLAGVVPSPLLLE
LLSCPLCARSLETLELELGDLEAGKSEADGLHDFPQGSDLRGCRGHFRRRRFAEYRHGAF
RAWMHFREKLRRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDVLEISNIVFTSMF
VLEMGFMLLAFGFFGYIRNPYNIFDSIIVIISVWEIIGQADGGLSVLRTFRLLRVLKLVR
FLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFGLRTENGDTIPDRKN
FDTLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVAILVE
GFQAEGDANRSESDDEKKSDNFDEDEKVEQFRDTELKMYSLMLTANGHIDPHGTVAPPII
MRTAATPMPTPKSSLGPESILEEELLYKEGLSQQSEVGLGFSEAGVDNVGSRRGSSTSID
PSAYDQQSLSFSSPGRRSPLPLRGSGSSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSG
EGGEEEENNQDENEEAGVNNRLKPGSMELQPPSPVCSSVRAEYGDCNGRTLTYNPNVNSD
LKDDFSAEDDLDDDSPFCYWVRREIQNIKPRWCKEHESWTLYLFSPESPVRSWCQSVISH
KLFDHVVLVFIFLNCITIALERPDIPPSSKERVFLSVSNYIFTVIFLAEMAIKVVALGFC
FGKQSYLQSSWNILDGVLVFVSLVDILVSLAYTSGNRILGILRVLRLLRTLRPLRVISRA
PGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTKNITNKSDC
EQAKYRWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLL
YFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKMIDKKRRSKENGGA
EAKQRPYYADYSPVRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYNQPQYLEEVLKYC
NYVFTFIFVIEALLKLVAFGFQRFFKDRWNQLDVAIVALSIMGITLEELKMKAALPINPT
IIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFG
KLDCSENNPCEGLSRHATFKNFGMAFLTLFRVSTGDNWNGIMKDTLRECLPDDSHCITYL
PWISPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMEEERQRRQ
STASNNSSVGGTYIGSCPSSPGEEEEEQCNDPDLSTQKISVSRMRSLPYDSYMFQPVRPA
SAPHPLKEVDPSSQHQHSVSVMSVHSQPCESRSLLQVPNISPHHPQSSPTLTVPCIASPV
SCPSPRALHRQVAVKVDSVESHSCEKQERSNSAHLLPHFPSPLSTHAASFTPVPPHSSAP
STLSLPPCSLSSSALPPSPSSSSPLPLLPSTPSLLLPPPPSPRLPPRSGSLRRPRAPSAV
SLSDPADEEVYHITSSARCRWRDGEGVERESRRKAGRSHSLSPYTLPCPLDFSFSSLSPP
PTLPPSSARSAHSLLEAGLKDAKKGLKVDNHGFLDKLSPESAGYSEDQRRHSIEVCLPQT
IPTSDSPRLTTEHCQPGKGTQAFPVRVQSVGSSHRKKKTSPPCISIYPPSEKEHPRLPSP
PKLADCSMMLRRRTPSSDLTPPSNPFTKDTSTNIRTQMQTPLTPIHVPLQALSPSHVLTP
TPTHAPPLTSTPTPSNIPISPNVFIQPHAPLLPTVMHFSQTRPLSSAARHPPAAGDCIQV
TQFNFDQPQSRYVSSLSAAISDPDPATCSSPFDSRLGSSAGFSAKNRRTAQ
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagtgcgctttcagtacgacgagtgccaggagcagggcgag
gtgcaggacgacgtaagggtttctataagaagcgagccccaaggtcacgatgctgacccg
ggaggaggccagggtgaggagaagaagaaggaaaaagagacggatgaggaggtggtggtg
gtgcagaagagaaagaggagctgtagcgggcccggcgaaggagctgagtggagcgctgaa
gttcatgaagagaaggaaccggaagcggaagctggaccaacgctgggagttcgaatcacg
gctccgattcgtgacccggactgcgtctccgaggatgaggagcagcagccgtaccccgcc
ctggctccagtggctttcttttgccttaagcaaacgacgaggccacgcaactggtgtctt
cgcatggtctgtaacccttggttcgagcatgtgtccatgctggtgatcctgctcaactgt
gtgactctggggatgttccagccgtgtgaggacgttacctgcctgtcagagtggtgccgc
atcctacaggtgttggatgactgcatctttgctttctttgctgtggaaatggtcatcaag
atggtggccctcggaatttttggctccaattgttacctcggtgataaatggaaccagctt
gactttgtcattgtcatggcaggggtgatggaatattctctggatggccacaatgccagt
ctgtcagccatccgtaccgttcgagtgcttcgaccgctgcgggccatcaacagagtacca
agtatgaggatcctggtgacgctgctcctggacacgctgcctatgctggggaacgttctc
ctcctttgcttctttgtctttttcatcttcggcattgtgggggtccaactgtgggcggga
ctactgcgcaaccgctgcttcctgggagaggacataaaaacaatgtacaacctgtctata
aacccttactatatgtcagaggaaggggaagacagcccctttatctgctcggcgccccgt
gagaacgggatgttgcgctgccacagcgtgccgccctacgtcgagggtagactggagtgc
tcactggctgctcccctccaaagttctgcactgattggatcttcccccggagtgggaggg
gccagcgttaatggctgcgttaactggaaccagtactacaacatctgccgccccggcgag
ctcaacccccacaagggagccgtcaacttcgacaacattggctacgcgtggatagccatt
ttccaggtcatcacgctcgaaggatgggtggacattatgtactatgtcatggatgctcat
tccttctacaattttatatattttatattgctcattattgtgggctctttcttcatgatc
aacttgtgcctcgtggtcatcgccacccaattctcggagacaaagcaaagagagaacgcc
ctgatgagggaacagcgcgctcgcttcatgtccaatgactcgaccctggccagttacagt
gagccaggatcgtgctacgaggagatgctccgatatattagtcacctttaccgcaaattt
cgacgcaggctgcagaggatgtactacggctggcacagcaaacgacgtaaaaaggtaaac
ccgaacggcagtgggtgtggcagcaacggtggcggcaatggtcatggccagggttccagc
agagtctctggtccgggcaccgcaatctggctgaggccgatccacaacctcctgcagaac
catcagcatcaacactgtcgccttagcaacggcgggcagcacacagtcagcgtgatgtcc
actgagcacatggacaaagagggaaccggggaggagctggagatgaaggtccgggaagga
agtacaaatggaaacggcggggacaacccgaccgtcgtcactcagggagttgggtcattg
ctcgggcgactaaatggggggatgaactatccgactatcctgccatccttcgtgtgtagc
tacagcagtaagacgccaccttctcactcaaagcagagcgggcgcagtccggagcagcga
ccgccaacgtctgaacacacagagaygctggccaagctttaccaactcatgggacagcac
agttgccaggggctgctctttcagctggcaggtgtggtgcccagccctctgcttttggag
ctgctcagctgtcctctgtgcgcccggagcctcgagacattagaactggaactaggagac
ctggaggcaggaaagagcgaggctgacggactgcatgatttcccccaggggagtgatcta
aggggatgtagaggccattttcgacgacgaaggtttgcggagtacaggcatggagccttt
cgggcctggatgcatttcagggaaaaactgagacggatagttgaaagcaaatatttcaac
cgagggattatgattgccattcttgtcaacaccctcagcatggggatagagtaccatgaa
cagcctgaagaactgacggatgtgttagagattagtaacattgttttcaccagtatgttt
gtgctggagatgggcttcatgctgctggcttttggcttttttggctacatcagaaaccca
tacaacatctttgacagcatcatygtcatcataagtgtgtgggagataattggtcaagcg
gatggtggactgtcagtcctccggacatttcgtctattgcgggtgctgaagcttgtgcgc
ttcctgcctgccctgaggagacagctggtggtgctgatgaagactatggacaatgtggcc
accttctgcatgctgctgatgctttttatctttacttttagtatactgggcatgcatctg
tttggatgtaaattcggtctacgaacggagaatggagacaccatccctgaccgcaaaaac
tttgatacacttctctgggccattgtcactgtattccagattctgacccaggaggactgg
aacgtggtgctgtacaatggcatggcttctacctctccatgggcgtctctctacttcgtt
gctctcatgacatttggcaactatgtgctcttcaatttattagttgccatcctggttgaa
ggctttcaggctgagggcgatgctaatcggtcagagtcagatgatgaaaagaaatccgac
aattttgacgaggatgaaaaggtggaacagttcagagacactgagctaaaaatgtactct
ctgatgctgacggctaayggtcacattgacccccatggcactgtcgctcctcccataatt
atgcgcacagcagcgacgcccatgcccacccctaaaagctctctgggacctgagtccatc
ttagaggaggaactgctgtacaaggaggggctatctcaacaaagtgaagttggattgggc
ttctctgaggctggagtggataatgtggggtctcgccgaggaagctcgacgtcaatagac
ccctcagcctatgaccagcaatctttaagtttctcaagtcctggtcggcgttctcctctt
cccctccgtggttcaggcagctcatgggggagccgccgctccagctggaacagcctggga
cgagcaccgagcctgaaaagacgagataccagtggagagagggagagcctgttatcaggg
gagggtggagaggaggaggagaacaaccaggatgaaaacgaggaggctggggtaaacaac
agactaaagccggggtccatggagctgcaaccgccgtctcctgtttgctcctccgtaaga
gcagaatatggtgactgtaatgggaggactctgacatacaacccaaatgtgaactctgac
ctcaaagatgacttctcagcggaggatgacttggatgatgatagtcctttctgctactgg
gtacggagagaaatccaaaacatcaagccccgctggtgtaaagaacatgaatcctggacg
ctttacttgttttctccagagagcccagtccgtagctggtgccaaagcgtgatctctcac
aaactgttcgaccatgtggttctggttttcatcttcctcaactgcatcaccatcgctctg
gagaggcctgatattcctcccagcagcaaggagcgagtgtttctgagtgtgtccaactac
attttcactgtgatcttcctagcagagatggccattaaggttgtagctcttgggttctgc
tttgggaagcagagctaccttcagtccagttggaacattttggatggagttttggtgttt
gtgtctctggtggacatcctggtwtctctggcctacacgagtggaaacaggatcctggga
attctcmgagtccttcgtcttctacgcacacttcgtccactcagggtgatcagccgagcc
ccaggtttaaagctggtggtggagacgctcatcacgtcccttagacctattgggaacatt
gttttgatctgctgcgccttcttcattgtgtttggaatcctgggggtccagcttttcaaa
gggaagttctaccactgtgagggtctggacacaaaaaacatcacgaacaagtctgactgt
gaacaggccaaataccgctggatacgaagaaagtacaactttgacaacttgattcaggct
ctgatgtctctgtttgtgctgtcgtgtaaggacggctgggttaacatcatgtatgatgga
ctggatgcagtgggggtggatcagcagcctgtgaggaaccacaatccctggatgctgctc
tacttcatctcctttttgctcatcgtcagcttctttgtgctcaacatgttcgtcggcgtg
gtggtggagaacttccacaagtgccgacaggaccaggaggaggaggaggcgcgtctgcgg
gaggagaagaggctcaaaatgatagataaaaagcgcaggagtaaggagaatggaggggct
gaagccaagcagaggccgtactatgcggactactcccccgtgcgtctgtccattcacaca
ctgtgcacaagccactatctggatctcttcatcaccttcatcatttgcatcaatgtcttc
acaatgagcattgagcactacaatcagccacagtatttggaggaggttcttaagtactgt
aactacgtgttcaccttcatcttcgtcatcgaggccctgctaaagcttgttgcatttggc
ttccaaaggttctttaaagacaggtggaatcagctggatgtagctatcgttgcattgtcc
ataatgggcatcactttggaggagctgaaaatgaaagcagcgttgccaataaatcctacc
atcatcagaatcatgagagtactcagaatagcaagagtgctaaaacttctgaagatggca
aaaggaatgagagctctgctggatactgtcatgcaggcgctgccgcaggtgggaaatctc
ggccttctcttcatgctgcttttcttcatctatgctgctctgggagtggagctctttggc
aaactggattgcagtgaaaacaatccatgtgaaggtctgagtcgtcacgcaacgtttaag
aacttygggatggcctttctgacgctgttccgagtatccactggagacaactggaatggg
attatgaaagacaccttacgggagtgcctgccagatgatagccactgtatcacatacctg
ccttggatctctccgatttactttgtcacctttgtgctcatggcccagtttgtcctggtc
aatgttgtggtggcagttttgatgaaacatctcgaagagagcaacaaggaggctaaggag
gatgcagagatggatgcagagattgcattagaaatggaagaggagaggcaacgcagacaa
agcacagcatccaacaatagctctgttggagggacctatattgggtcatgtcccagttca
cctggagaggaggaagaggagcaatgcaatgacccagacctgtccacacagaaaatatct
gtgtccaggatgcgctctctaccatatgacagctacatgtttcaacccgtgcgccctgcc
agtgccccccacccactgaaggaggtagaccccagttcccagcaccagcattcagtttca
gtgatgtcggtccattcccagccctgcgagagccgctcgctgctgcaggttccaaacatt
tctcctcatcaccctcagtcaagtcccaccctcacagttccctgcattgcctcaccagtg
tcctgcccctcaccacgagccctgcacagacaggtggcagttaaagtggactcagtggag
tcccacagttgtgagaaacaagagaggtcaaactctgctcatcttctcccacacttcccg
tctcctctctctactcatgctgcctcgttcacgcctgtgccccctcattcctccgctccc
tccaccctctccctcccgccctgctccctctcttcctctgccctccctccatcgccatcc
tcctcgtctccactccctctgctgccatcaaccccctcgcttctcctcccgccacccccc
tccccgcgtcttcccccgcgctccgggagcctccgccgacccagggcgccgtccgccgtc
tccctctcggacccggccgacgaggaggtgtatcacataaccagctctgcccgctgcagg
tggagggatggggagggcgtggagcgggagagcagacgaaaagccggccgtagccactcc
ctctccccttacaccctgccgtgccctctcgacttcagcttcagctccttgtctcctcct
cccacgctgccaccttcctccgcaaggagtgcgcacagtctactcgaggcaggtttgaag
gatgccaagaaaggcttaaaggttgacaaccacggcttcctggacaaactgtcgccagaa
tctgctgggtactctgaagaccagcgtcgccactccattgaggtttgccttccacagacc
attccaaccagtgacagtccacgcttgacaacagagcactgccagcctggaaaaggcact
caggcatttcctgtgagggtgcagtcagtcggtagcagccacaggaagaagaagacaagc
ccgccctgcatatccatctacccaccctctgagaaggaacacccccgacttccatcaccc
ccaaagttggccgactgcagcatgatgctaagacgccggacaccatccagtgacctgacg
ccgccatcaaaccccttcacaaaagacacgtcgaccaacatccgcacacagatgcaaaca
cctttgacgcctatccacgtgccgctgcaagcactatcaccatctcacgtgctgacacct
accccaacgcacgctccgcccctcacgtctacgcccaccccgtccaacatcccgatcagc
ccgaacgtcttcatccagccacacgcccctcttctccccaccgtgatgcacttttcacag
acgcgccctctgtcttctgccgcaaggcacccacccgctgcgggagactgcatccaagtc
acccagtttaactttgaccaaccacagtccaggtacgtgagcagcctgtcagcagccatt
tcggacccagatccggccacttgctcttccccgttcgacagcagactgggaagcagcgca
ggttttagcgcgaagaatcggaggaccgctcagtaa
DBGET
integrated database retrieval system
