Austrofundulus limnaeus (annual killifish): 106525582
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Entry
106525582 CDS
T06063
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106525582 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106525582 (polr1b)
Enzymes [BR:
alim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106525582 (polr1b)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106525582 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Birna_RdRp_palm
Motif
Other DBs
NCBI-GeneID:
106525582
NCBI-ProteinID:
XP_013875328
UniProt:
A0A2I4C5R6
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MTELSAKWSSLPAEPSLKNLTDGEFGKLNENQDPAIQDLTRAHLESFDQAVTDGLSRVVQ
AIPPLEFMCKTDKVSLSFVDATIQSPAVGKGSVCTEMKVFPAECRGRRCTYRGKLVADIS
WSINGVPKGIIKQYLGQLPVMVKSRLCNLHGMSPTELVRHHEEAEEMGGYFIVNGIEKVI
RMLIMPRRNYPIAVSRPKWRSRGQGYTQYGVSIRCVKEEHTAINMNLHYLENGMVMVNFI
YQKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKTCVSEMLRVVAEEGCTTRSK
VLDYLGEHFRVKLNLPEWYTNQECANVLLDECVCIHLKSDLEKFYLLCLMTRKLFSFAKQ
ECMEENPDSIMCHEVLTPGQLYLMFMKERLTSWLVSVKLSFEKRGSKLSDAWSTEKVIKM
LNMGSDLTKAFEYLLATGNLHSKTGLGMLQSTGLSVVADKLNFIRYLSHFRCVHRGAAFA
KMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAAVALTTTLPALLCSLGV
TPMDGSPCQAFSDCYPVVLDGAVVGWVESDLAPSVVEALRSFKVLREKKVPPWTEIVLIP
RTGKASLYPGLFLFTTPCRMMRPVQNLAHGQEELIGTFEQLYINVGILEDEVEAGVSTHQ
ELFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLLTPQS
PLVRPCMYDRYSLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELV
DLGDKVRGEDSVVFGNKPGDPKVNGKLDSDGLPYIGSLLQYGDPFYSYINLNTGQTFVTF
YKSHEACFVDNIKICSNDSGSGRFKRVCITVRMPRNPTIGDKFASRQGQKGILSRLWPAE
DMPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESSALE
YFGEMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGLRDK
VTNQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPL
LEKPPPYWSSTCHRKTTCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVRLDVK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgacggagctttcagcgaagtggagcagtttacctgcagaaccgagcctgaagaacctg
acagacggggagttcggtaaactaaacgagaaccaggaccccgcgatccaggacctgacc
agagcccacctcgagtccttcgaccaggcggtgactgacgggctcagccgggtcgtgcag
gccatccctcctttagagttcatgtgtaaaaccgacaaggtgagcctctcatttgtggat
gcaaccatccagagcccggcggtcgggaagggcagcgtctgcaccgagatgaaggtgttc
ccggcagagtgtcgaggaagaagatgtacttaccggggaaagctggtggccgacatcagc
tggtccatcaacggggtccctaaaggcatcatcaagcagtacctgggccagctgcctgtc
atggtgaagtccaggctgtgcaacctgcatggcatgtcccccacagagctggtcaggcat
cacgaggaggccgaggaaatgggcggttacttcatcgtgaacgggatcgagaaggtcatc
cggatgctgatcatgccccgcaggaactaccccatcgccgtgtccaggcccaagtggaga
agccggggtcagggctacacgcagtacggcgtgtccatccgctgcgtgaaggaggagcac
acggccatcaacatgaacctccactacctggagaacgggatggtgatggtgaacttcatc
taccagaaggagctcttcttcctcccattaggcttcgccctgaaggcccttgtggacttc
acagacttccagatctaccaggagctgatcaaaggccgtgaggacaactccttctataag
acctgcgtgtccgagatgctgcgcgtcgtggcagaggaaggctgcacgacccgcagcaag
gtgctggactaccttggcgagcacttcagggtcaaactgaacctgcctgagtggtacacg
aaccaagagtgcgccaacgtcctgctggacgagtgcgtctgtatccacctgaagtcggac
ttggagaagttctacctgctttgtctcatgacccggaagcttttcagcttcgccaagcag
gagtgcatggaggagaaccccgacagcatcatgtgtcatgaagtgctcactcctggtcag
ctgtacctgatgttcatgaaggaacgcctgacgtcctggttggtgtcggtgaaactgtcc
tttgaaaaacgaggatccaaactgtctgacgcctggagcacagagaaagtgatcaagatg
ttgaacatgggctcagacctgaccaaagcttttgagtacctgctggccaccgggaacctc
cactccaagaccggtctcgggatgctgcagagcaccggtctctctgtcgtcgcagacaag
ctgaacttcatccggtacctgtcgcacttccgctgcgtgcaccgaggagccgccttcgcc
aagatgaggaccacctcggtccggaagctgctgcccgagtcctggggcttcctgtgtccg
gtccacactccggacggggagccgtgtggactcatgaaccacatgaccgccagctgtgag
atcgtggcagccgtggctctcaccacaaccctgccggctctgctctgttccctcggtgtg
accccgatggatggatccccctgccaggccttctcggactgctaccccgtggttctggac
ggagctgttgtaggctgggtggagagcgatttggctccgtctgttgttgaggcgctgcgc
agcttcaaggtgctgagagagaagaaggttcctccctggacagagatcgttcttatcccc
agaaccggcaaagccagcctgtacccgggcctgttcctcttcaccacgccgtgtcgcatg
atgcggcccgtacagaacctggctcacggccaagaggagctgatcggcaccttcgaacag
ctttacatcaacgtgggcatcctggaggacgaggtggaagcgggcgtgagcacccaccag
gagctgttccctcacagcatgctcagcgtggtggctaacttcatcccgtactccgaccac
aaccagagtcccaggaacatgtaccagtgtcagatgggtaagcagacgatgggttttcct
ctgcactccttcacggatcgctccgataacaagctgtaccggctgctgaccccccagagc
ccactggtcaggccctgcatgtacgaccgttacagcctggacaactaccccagtggcacc
aacgccatcgtcgccgtcatatcgtacacgggctacgacatggaggacgccatgatcgtg
aacaagtcgtcgtgggaaagaggcttcgcccacggaagcatctacaagacggagttggtg
gacctgggggacaaggtgcggggcgaggacagcgtcgtgttcgggaacaagccgggagac
cccaaggtgaacgggaagctggactctgacgggctgccttacatcggatcgctgctccag
tatggagatccgttctacagctacatcaacctgaacaccggtcaaaccttcgtcaccttc
tacaagagccacgaggcctgctttgtggacaacataaagatctgcagcaacgactccggc
tcgggtcgtttcaaacgcgtctgcatcacggtccggatgccacggaaccccaccatcggt
gacaagttcgccagccgccarggtcagaagggcatcctgagccgcctgtggcccgccgag
gacatgccgttcacggagagcggcatgtccccggacatcctgttcaacccccacggcttc
ccgtccaggatgaccatcggcatgctgatcgagagcatggcggggaagtccggcgccctg
cacggcctgagccacgatgccacgcccttcaccttctccgaggagagctcggcgctggag
tacttcggcgagatgctgcgcgccggcggctacaactactacggcacggagcggctgtac
agcgggctgagcgggcaggagctggaggcggacatcttcatcggcgtggtctactaccag
cgcctgcgccacatggtctccgacaagttccaggtgaggaccaccgggctgcgggacaag
gtgaccaatcagcccgtggggggcaggaacgtccaggggggcatccgctttggggagatg
gagcgcgacgccctgctggctcacggctcgtccttcctgctccacgaccgcctcttcaac
tgctcggaccgctcggtggctcaggtgtgcgtggactgcggcagcctcctgtccccgctg
ctggagaaaccgcccccctactggtcctccacctgccacaggaagaccacctgcaccctg
tgcggcaagagcgactccatcgactcggtgtcrgtcccgtacgtcttccgctactttgtg
gccgagctcgcagcgatgaacatcaaagtcaggttagacgttaagtga
DBGET
integrated database retrieval system
