Austrofundulus limnaeus (annual killifish): 106535994
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Entry
106535994 CDS
T06063
Name
(RefSeq) PR domain zinc finger protein 2-like isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim00310
Lysine degradation
alim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106535994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106535994
03036 Chromosome and associated proteins [BR:
alim03036
]
106535994
Enzymes [BR:
alim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
106535994
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106535994
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106535994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2HE
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_8
YjdM_Zn_Ribbon
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
106535994
NCBI-ProteinID:
XP_013888614
UniProt:
A0A2I4D8Q3
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MDNSPXLYVSELEDSEGVQEEPDTRCDHXXXPNQDVERDSFFCQDCKRYFTSRQSLEQHM
HSHVFMNGEAHAFKSSSLTSSSTNTSTSSASGDHSDQHHIPETLEEHHAYTYAEKIFTTN
ANKQQHECIVHDDPXELMHDEQTKLQPEGIFQPLPNESPQHHSLHAEKTASTSLLKNEQV
NAEKYMSDLPNISENLSFYIDGKLVSTSMVSSCEVAELQAGTSPLIGLDALIVDPVQISQ
VLNADTEIPSLQQGKRRTTTPPLLPQINSELESEVVVSSFSSSLVSSLIDNLFPQSSEAT
LVHKERTVFLSPKLKQLLEKQEVLKPTVTLITDGQNPSSPVSLSVLPSGTGRFRRRTSSP
TGLMHQISTSEETSEPDSEDFSSGIAQQIDRSPVQQMFNENDPTXSSAVQEVKPVLSESW
PPVTGGNSCNQKPLDLSNTVKRNEDVASGDAALDLSLQRKSSGESGLTLDLVSQAVLKGE
SNTYMVEKALVKTGEQKIDLGNPLTPLVTDFTFVTGSDVVGPLEHVAEGLVYGLAIPPNT
LTSSAASLTPVALEPASPCTIAFASPLAHNVLPTAPSVITVLAPPSSISNPSNQPIQVLT
PTLSHEPLVICTENALNSSDCDLTTAFASTNPASIVTLSQPIDPTLNLPGHVFLTDQIAL
NPPVVESSSGTQVQFPSAVTLNDSLLNIARNTVLIECTISLEAPGSVVPPAVTVQDNAAE
PPVSTEMMVNHTEQQQTVSVPNPQTVDHTILVSSVTESVALSNNTDVVSDSPTADDSNPD
PQPVESTNPPTKKEEEAADSTVSTSEMPPATSPPHPLLEKADEESSTNTGNDPQKQTFAK
NFVCNVCDKLFHSMKELGHHVVNHADEWPYKCEFCVLLFGKPSDLLDHRSSLHGVGKTYV
CSACTKEFVYLCNLKQHQEELHPGQQCSHTEEEKGKLRPQNYNNSTKVNSDPLVLKHLEE
PKKLVKKEECEVGVTADEVLTTIKTMASDGSKVKGPDVRLGINQHYPSFKPPPFPYHNRS
PAGSLASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILVCANASDKRRYTPRKN
PIPLRHFAKTQNGVLSTTNSANGLNNVSQTSRAKPSQESPIKLKILNKRKKKLVQRVMPQ
RNKSVPSSNKMSPTQVAEPQEVFVCPHCSREFTMRRSRTKHAVVCPKKPKEKKKRKEGGI
SFTKENDEHLQRGLSHVKEKKQSSPQHNTRLQTSISAKRPAVLPVQTVFSSKRSKIIIKE
GTQAKEEASTFSDVPIRTFNPSMRQYSRVQHGIKGVPIKITIVKPRQSVPQKDEPPPTHS
REEATGTTASRSEQNIMA
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcaccccrtttgtacgtttctgaacttgaagacagtgagggtgtacaagaa
gaaccagacacgagatgtgatcacawaaammccccaaatcaagatgtggaaagagactcg
tttttctgccaagactgcaagagatactttaccagcagacaaagcctggaacaacacatg
cacagccatgtttttatgaacggtgaggcacatgcgttcaaaagcagctctttaacctct
tctagcaccaatacttcaacttcttcagcaagtggagatcacagtgatcagcatcatatt
cctgaaacattagaagagcatcatgcttacacatatgctgagaagatattcacaacaaat
gccaacaagcagcaacacgagtgcattgtccatgatgacccacyggaactcatgcatgat
gagcaaaccaagctgcaacccgagggaatttttcagccactacccaatgaatcacctcaa
caccattcactgcatgctgagaaaacggcatccacatcgcttctaaagaatgaacaagta
aatgcagaaaaatacatgtccgatttgcctaatatttcagagaatctcagcttttacatt
gatggaaagttagtgtcaacaagcatggtcagtagctgtgaagtagctgagcttcaggct
ggtacttcacctttaattggaytggatgccctgattgtagaccctgtccagatcagtcag
gttttaaatgcagatacagaaatacctagtctacagcaaggcaagagaagaacgacaaca
cctcctcttttaccacaaattaattctgaattggaatctgaggtggtggtgtcttcattc
tcttcatctcttgtttcttctttaatagataatctcttccctcagagttcagaggctaca
cttgtgcacaaggaaagaacagtattcctgtcaccaaaactgaagcagctccttgagaag
caggaggttcttaaacctacagtcaccctaatcacagatggccaaaatccatcctcacct
gtttccctctctgttctaccctctgggacgggaaggtttaggagaagaaccagctctcca
acaggcttgatgcatcaaatttcaacaagtgaagaaacgtcagagcccgattctgaagat
tttagttctggaattgcacagcagattgatcgctcacctgtgcaacaaatgttcaatgaa
aacgatccgactycctcttcagcggtgcaagaagtgaaacctgttctgtcagaaagctgg
ccgcctgtaactggtggtaattcttgtaaccaaaagcctctggatctctctaayacagtc
aaaagaaatgaagacgtggcttcaggtgatgctgctttagatttgagcttgcaaagaaag
agctcaggtgaatctggactaacattagatttggtttctcaagcagttttgaaaggagag
tcaaatacatacatggtggaaaaagccttagttaagaccggagaacaaaaaatagacctg
gggaatcctttgactcccctggttacagactttacttttgtcacaggttcagatgttgtt
ggcccactggagcatgttgcagagggtcttgtttatggacttgccatacctcctaatact
cttacttcatcagctgcttcactgacccctgttgccttggagcctgcttcaccatgcacc
atagcatttgcttccccacttgcacacaatgtccttcctactgctccctcagtaattacg
gttttggccccaccttcatctatttctaacccctcaaaccaaccaattcaagtattaacg
ccaactttatctcacgagcctttggtaatctgtacagaaaatgcattaaattcttcagat
tgtgatttaaccactgcatttgcttccaccaaccctgcaagcatcgtcactctttcccaa
ccaatcgacccaactcttaacctacctggccatgtgttcctcactgatcaaattgcgctc
aatccacctgtggttgaatccagttctgggacacaagtacagttcccatcagctgtaacc
ctaaatgattccctactcaacattgccagaaacacagtgttaattgagtgtacaatatct
ctcgaagccccaggaagtgttgttcctcctgcagttactgtacaagacaatgctgctgaa
cctccagtatccactgagatgatggttaatcacacagaacagcaacaaactgtgtctgtg
cccaaccctcaaactgtggatcacactattcttgtatcttctgtcacagaatctgtagct
ctctccaataacactgatgtggtatctgattctcctactgcagatgactcaaatcctgac
ccacagcctgttgagagtacaaacccaccgaccaaaaaagaggaggaagcagctgacagt
actgtttccacatcagaaatgccacctgcaacctctcctcctcaccctcttcttgaaaaa
gccgatgaagagtcatcaaccaacacaggaaacgatccacaaaagcagacgttcgccaaa
aattttgtctgcaacgtgtgtgataagctttttcattcaatgaaggaactcggacatcat
gtagtgaaccacgctgacgaatggccctacaaatgtgagttctgcgtgctgctctttggc
aagccttccgatttgctcgaccatcgatcaagcctccatggcgttgggaagacttacgtt
tgcagtgcgtgcacaaaagaatttgtctacctttgtaatctgaagcagcatcaggaagag
ttgcatcctggccaacagtgttcacacacagaggaagaaaagggaaaattgagacctcag
aactataacaactcgactaaagtgaactcagatcctttagttctaaaacaccttgaggaa
cccaagaaactggtgaaaaaggaagaatgtgaagttggcgtgactgccgacgaggtgttg
acgacgattaagaccatggcttcagatgggagcaaagttaaagggcctgatgttcgtctg
ggcataaaccaacactaccccagcttcaagccgcctccttttccttatcataaccgatca
cctgctggatcacttgcttcagcaacaaactttaccacccacaacatcccacaaaccttc
agtacagctattcgatgcaccaagtgtggaaatagctttgacaacatgccagagctgcac
aaacacatcttggtgtgtgcaaatgcaagtgataaaagacgatacacgcctcgaaaaaac
cctatccctttacggcactttgcaaaaactcaaaatggagtgctttctactactaactct
gctaatggactaaacaatgtcagtcagacaagcagggccaaaccaagtcaggaatcacca
ataaagcttaaaatactgaacaaaaggaagaaaaagttggttcaaagagtcatgccacaa
agaaacaagtcagtcccatcttcaaataaaatgtcacctacgcaggtggccgagccacag
gaagtctttgtctgcccacactgcagcagggagttcacaatgcgccgcagccgaaccaaa
catgcggttgtctgccctaagaaaccaaaagaaaagaagaaacggaaagaaggtgggatt
tccttcacaaaagaaaatgatgaacacttgcaaagaggtctttctcatgtgaaggagaag
aagcaatcatcacctcagcataacacaagactccagacatctatatctgcaaagaggccc
gctgttctgccagtgcaaactgtcttctccagcaaaagaagtaaaatcatcataaaagag
ggcacacaggccaaagaggaggcatccactttctcagacgttcccattcgcactttcaac
ccctccatgcggcagtacagcagagtgcagcatggcatcaaaggagttcccattaaaatc
accatagtgaagcctcggcagagcgtaccacagaaagacgagccccctcccacgcacagt
cgagaggaagcaactggaaccactgccagccgctcagagcagaacattatggcttga
DBGET
integrated database retrieval system
