Alkalimarinus alittae: NKI27_05070
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Entry
NKI27_05070 CDS
T08567
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alkm03009
]
NKI27_05070 (rimO)
Enzymes [BR:
alkm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NKI27_05070 (rimO)
Ribosome biogenesis [BR:
alkm03009
]
Prokaryotic type
ribosomal protein modification factors
NKI27_05070 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UZE97122
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All DBs
Position
1142673..1144097
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AA seq
474 aa
AA seq
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MTVKSFDPSQQNDTITENQAIAESELIEMASVEGASSGARIGFVSLGCPKNLVDSERILT
QLRIEGYDVTPSYDDADMVIVNTCGFIDSAVQESLDAIGEALAENGKVLVTGCLGAKKDD
ITEVHPGVLGVTGPHAYENVLDQVHQHVPRPEHNPFEHLIPAQGVKLTPRHYAYLKISEG
CNQKCTFCIIPSMRGRLDSRPVGEVLDEAQRLVSNGVKELLVVSQDTGAYGVDTKYRMGF
WQGRPVKTRFLDLCESLGEMGAWVRLHYLYPYPHIDDAIPLMAAGKILPYLDIPLQHASP
RILKMMKRPGSIDNTLARIKKWREICPDLTIRSTFIVGFPGETEEDFQLLLEFIKEAQLD
RVGCFKYSPVEGAVANDLAEAVPEDVKDARLAQFMELQAKISADRLQLKVGKRMQVIVDE
VTEEGSVARTKGDAPDVDGLVFIDNVTNVAPGDMLDVIIEEADEHDMWAHLAES
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacagttaagagctttgaccctagccagcagaacgacactattaccgaaaaccaagca
attgcagagagtgagttgatcgaaatggcatctgtagaaggcgcttcaagtggtgcgcgc
attggttttgtgagcctggggtgccctaaaaatttagtggactctgaacggattttgact
cagcttcgtattgagggttatgacgtaaccccaagctatgatgatgctgatatggttatt
gtaaatacctgtggttttattgatagtgcggttcaggaatctttagatgcgattggtgaa
gcgctggccgaaaatggaaaagtattggtcacgggttgtttgggcgcaaagaaagatgat
attactgaagttcacccaggtgtattgggtgtgacagggcctcatgcttacgagaatgta
ttagatcaggttcatcagcatgtgccgcgccctgagcataacccgtttgagcatcttatt
cctgcgcagggtgttaagttaacacctcgtcattatgcgtatttaaaaatatcagaaggc
tgtaatcagaagtgcacgttttgcattattccatcaatgcgaggacgtcttgatagccga
cctgttggagaggtgttagacgaagcgcaacgacttgttagcaatggcgtaaaagagcta
ttagtggtttcgcaagatacgggtgcttacggggttgatactaaataccgtatgggcttt
tggcaggggcgcccggttaaaacgcgctttcttgatttatgtgagtcactaggcgagatg
ggggcttgggttcgcttgcactatctttacccttacccacatattgatgatgcgataccg
ttgatggcagcaggtaagattctgccgtatttagatattccgctacagcatgctagcccg
cgtatattgaagatgatgaagcgcccaggatcgatcgataacacgttggcgcggattaaa
aaatggcgagagatttgccctgacttaactattcgaagcacgtttattgtcgggttcccc
ggcgagactgaagaagactttcagttattgttagaatttataaaagaagcacagcttgat
cgcgtcggttgctttaagtattcgcctgtagaaggggccgttgcaaacgatttagcagaa
gcggtgcctgaagatgttaaagatgcgcgcttggctcagtttatggagctacaagctaaa
atcagtgcagatcgattacagttgaaagtcggcaagcgtatgcaggtgattgttgatgaa
gtgaccgaagagggatcggtagcccgcactaagggtgatgcgcctgatgttgatggttta
gtttttattgataatgtgactaatgtagcgccaggcgacatgcttgatgtgatcatagaa
gaagcggatgagcatgatatgtgggcgcatttagctgaatcttaa
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