Alloactinosynnema sp. L-07: CRK58468
Help
Entry
CRK58468 CDS
T04489
Name
(GenBank) Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
alo
Alloactinosynnema sp. L-07
Brite
KEGG Orthology (KO) [BR:
alo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alo03009
]
CRK58468
Enzymes [BR:
alo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CRK58468
Ribosome biogenesis [BR:
alo03009
]
Prokaryotic type
ribosomal protein modification factors
CRK58468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
CRK58468
UniProt:
A0A0H5CM10
LinkDB
All DBs
Position
I:complement(3689952..3691388)
Genome browser
AA seq
478 aa
AA seq
DB search
MSVPSPSTSRRVAMLTLGCARNEVDSEELAGRLSGGGWELVDLDDAAPDVIVVNTCGFVE
SAKKDSVDTLLAAADTGAKVVAVGCMAERYGAELAESLPEASAVLGFDHYPDLAERLGDV
VAGHAIESHTPVDRRTLLPITPVKRQTAAQEVTVPGHGWVPRVRLADGPVASVKIASGCD
RRCSFCAIPSFRGSFVSRTPDEIVGEAAWLAGEGVRELVLVSENSTSYGKDLDGTGVLEA
LLARLAAVPGIDRVRVSYLQPAETKPSLVKAIAATEGVADYFDMSFQHSSGSVLRRMRRF
GDTESFLGLVEQIRAAAPEAGIRSNVIVGFPGETEDDVDELARFLTTARLDAVGVFGYSD
EDGTEAEHLDGKLDVDTITARVARISALAEELTAQRAEDRVGTEVVVLIEHEETDDEDCT
GRAAHQAPEVDGECVVVNADDFDLAAGDLVRCRVIDTEGVDLVVEPIEIVPRVAPASP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtgccctctccgtcgacgtcgcgtcgtgtcgccatgctcaccctcggctgtgcc
cgcaatgaggtggactccgaggaactggccggacgcctctccggtgggggctgggaactg
gtcgacctcgatgacgccgcgcccgacgtgatcgtggtgaacacctgcgggttcgtcgag
tcggccaagaaggactccgtcgacacgctgctcgccgccgccgacaccggggccaaggtc
gtcgcggtgggctgcatggccgagcgctacggcgccgagctggccgagagcctgccggag
gcgagcgccgtcctcggcttcgaccactaccccgacctggccgaacgcctcggtgacgtg
gtcgccgggcacgccatcgagtcgcacaccccggtcgaccgccgcaccctgctgcccatc
acgccggtgaagcgccagaccgccgcccaggaagtgaccgtccccggccacggctgggtg
ccgcgcgtgcggctcgccgacgggccggtggcctcggtgaagatcgccagcgggtgtgac
cgccgctgctcgttctgcgccatcccctccttccgcgggtccttcgtctcccgcacgccc
gacgagatcgtcggcgaggcggcctggctggcgggggagggcgtgcgcgagctcgtcctc
gtcagcgagaactcgacctcctacggcaaggacctcgacggcaccggcgtgctggaggca
ctgctggcccgcttggccgcggtgcccggcatcgaccgggtgcgcgtgtcctacctgcag
cccgccgagaccaagccgagcctggtgaaggccatcgccgccaccgagggtgtcgccgac
tacttcgacatgtccttccagcactccagcgggtccgtgctgcgccggatgcgccgcttc
ggcgacaccgagtccttcctcgggctggtcgagcagatccgcgccgcggcccccgaggcg
ggcatccgcagcaacgtcatcgtcgggttccccggcgagaccgaggacgacgtcgacgag
ctggcccggttcctcaccacggcccggctcgacgcggtcggcgtgttcggctactccgac
gaggacggcaccgaggccgagcacctcgacggcaagctcgacgtcgacaccatcaccgcg
cgggtcgcgcggatctccgcgctcgccgaggagctcaccgcgcagcgcgccgaggaccgc
gtcggcaccgaggtcgtcgtgctcatcgagcacgaggagaccgacgacgaggactgcacc
ggccgcgccgcgcaccaggcccccgaggtcgacggcgagtgcgtagtggtcaacgccgac
gacttcgacttggccgccggtgacctggtccgctgccgggtgatcgacaccgagggcgtc
gacctggtcgtcgagcccatcgagatcgtgccgcgcgtggcaccggcgtcgccatga
DBGET
integrated database retrieval system
