Alteromonas sp. RKMC-009: DS731_10365
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Entry
DS731_10365 CDS
T05653
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alr03009
]
DS731_10365 (rimO)
Enzymes [BR:
alr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DS731_10365 (rimO)
Ribosome biogenesis [BR:
alr03009
]
Prokaryotic type
ribosomal protein modification factors
DS731_10365 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AYA64373
UniProt:
A0A385MVN4
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All DBs
Position
complement(2327993..2329438)
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AA seq
481 aa
AA seq
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MSVEKYTPNATTTLSTPVKVLESQRSDSPASTVENPIAKIGFVSLGCPKNLVDSERILTQ
LRTEGYDVVPTYNDADLVIVNTCGFIDSAVQESLDTIGEALTENGKVIVTGCLGIKEDEI
REVHPNVLAITGPHAYESVVEQVHSHLPKPVHNPFEHLVPDHGIKLTPRNYAYLKISEGC
NHRCTFCIIPSMRGDLVSRPVGEILDEAKRLKSAGVSELLVISQDTSAYGVDVKHRTGFW
NGMPVKAHMQQLCEKLGELDMWVRLHYVYPYPHVDDLIPLMNEGRILPYLDIPFQHASKR
ILRLMKRPGSAERTIERVKAWREACPELIIRSTFIVGFPGETEEEFEELLTFLREAQLDR
VGCFAYSPVEGAKANDLPDPVPEDVKQDRLARFMAVQSEISAQRLKSRIGKEYLVVIDSV
DAEGAVGRTYADAPEVDGVVHLNGVHDVKPGERVWAEIIHADEHDVWGVLSPDDDEEMET
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagagaaatacaccccgaacgcgaccaccacactcagtactccggtcaaagta
cttgagtcacagcgtagcgacagcccggcatccaccgtggaaaatcccattgcgaaaata
ggctttgtcagtttaggctgcccgaaaaacctcgtggattccgagaggatcctcacccag
cttcgcaccgaagggtacgatgttgtccctacttacaacgatgccgatctcgtcatcgtc
aatacctgcggttttatcgattctgctgtgcaggaatctttagatacgattggtgaagca
ctgacagaaaacgggaaggtgattgtgaccggttgtctcgggatcaaagaagatgaaatc
cgcgaggtgcatccgaatgtgctcgcgatcaccggcccccatgcttatgaaagcgtggtg
gaacaggttcacagtcatctgccgaagccggttcacaatccgttcgagcaccttgtaccg
gatcacggcattaaactgactccgagaaactacgcctatctcaaaatctccgagggctgt
aaccaccgctgtacattctgcattattccatctatgcggggagacctggtcagccgtccg
gtgggtgaaatacttgatgaagcaaagcgcctgaaatctgcaggtgtcagcgaattactg
gtcatttcccaggacaccagtgcatacggtgtagatgtaaaacaccgcaccggtttctgg
aatggaatgccggttaaggcacatatgcagcagttgtgtgaaaaactcggtgaactggat
atgtgggtgcgtctgcactacgtttatccctaccctcatgtggatgatcttattccgcta
atgaatgaaggtcgtattctgccgtatcttgatatcccttttcagcatgccagcaaacgt
atcctgcgtctgatgaagcgtccgggcagtgcagaacgcaccatcgagcgggtcaaagcc
tggcgtgaagcttgccctgagctcattatccgctcaacctttattgttggtttcccggga
gaaacggaagaagaatttgaagaattgctgactttccttcgcgaagcacagctggaccgc
gttggctgctttgcttacagtccggttgaaggcgcaaaggccaatgatttgcctgacccg
gtgccggaagacgttaagcaggaccggcttgcacgctttatggcagttcaaagcgaaatc
agtgcacaacgcctgaagtcacgtatcggtaaagaatatctggtggtcattgacagtgtc
gacgccgaaggtgccgttggccgtacttatgcggacgccccggaagtcgacggcgtcgta
cacctcaatggtgtgcacgatgtgaaaccgggtgaacgtgtgtgggcagaaatcattcat
gctgatgagcacgatgtctggggcgttttgagtcctgacgatgacgaagagatggaaacg
gcctga
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