Alteromonas naphthalenivorans: ambt_04085
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Entry
ambt_04085 CDS
T01513
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt00300
Lysine biosynthesis
alt01100
Metabolic pathways
alt01120
Microbial metabolism in diverse environments
alt01230
Biosynthesis of amino acids
Module
alt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ambt_04085
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alt01002
]
ambt_04085
Enzymes [BR:
alt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
ambt_04085
Peptidases and inhibitors [BR:
alt01002
]
Metallo peptidases
Family M20
ambt_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DUF4585
Motif
Other DBs
NCBI-ProteinID:
AEF02367
UniProt:
F5ZC49
LinkDB
All DBs
Position
956750..957913
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AA seq
387 aa
AA seq
DB search
MNNTALSLVHHARSIHFAEVLMARESITPVDAGCQSYLMHRLEKLGFACEKHKVEGVTNL
IAKWGDGPIHFAFSGHTDVVPPGPLEQWKSNPFCPVISQNKLYGRGAADMKTGVAAMLAA
TERALPSMNSNQYTYWWLITSDEEGEAEYGSKWIKAYLDAKHITLDMCLVGEPTATHTTG
DTIKVGRRGSLSGTILVSGKQGHVAYPHTCDNAIHKASRIIQALSSYEFEQGSLDFPGTS
LQVTHVDTGAFTDNLVPGSTRIEFNVRYAWQFNRDSLVKLLTRITAEVDSEASISWSRPC
ESYLSRSNTEKRCLINITEKAIRQATGRYPVVSTSGGTSDGRFFASDTTQVVEVGVPNAT
IHQVNEHVHLSDIVTLEDIFTDVLLSL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatactgcgctttcgttggtccaccacgctagaagcattcattttgcagaagtg
cttatggcacgggaatccattacccccgttgacgctgggtgccaaagctatctaatgcac
cgattagaaaagctaggctttgcatgtgaaaagcacaaagtggaaggggtgactaattta
atcgctaaatggggggatgggcctatccattttgctttttctggccacaccgatgtagtg
ccaccaggcccattagaacaatggaaatctaatcccttttgcccagtgataagtcaaaat
aagctttatggtcgtggcgctgccgatatgaaaaccggtgttgctgccatgctagcagca
acagaaagagcgctaccatcaatgaattcaaaccaatatacgtattggtggttgattacc
agtgatgaagaaggcgaggctgaatatggctctaaatggataaaggcctatttagatgct
aaacacattacacttgatatgtgcttagtaggcgagcctactgctacgcatactaccggc
gacaccattaaagtaggccgcagaggttcattgtcgggcacaattttggtatcgggaaaa
caagggcatgttgcttacccgcatacgtgcgataacgcaattcacaaagcaagccgtatc
atacaggcgttatcctcctacgagtttgaacaaggtagcctcgactttccaggtacgtct
ttgcaagtcactcacgtagatacgggcgcgtttactgataatttggtgccgggtagtacc
cgtattgaatttaatgtgcgttacgcatggcaatttaaccgtgacagcttagttaagtta
ttaacacgtattaccgctgaagtagatagcgaggcttcgataagctggtctagaccctgt
gaatcctatttgagtagaagcaatacagaaaagcggtgcttaattaatattacagaaaaa
gccattcgacaagccactggacgttaccccgtggtcagcacgtctggcggtacctcagac
gggcggttttttgcatcagacacaacacaagtggtagaagtgggtgtaccaaatgccacc
atccaccaagttaatgaacacgttcacctatccgatattgtgaccctagaagatattttt
acagatgttttattgagtctgtaa
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