Algibacter luteus: O5O44_00135
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Entry
O5O44_00135 CDS
T09147
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
alut
Algibacter luteus
Pathway
alut03030
DNA replication
alut03410
Base excision repair
alut03420
Nucleotide excision repair
alut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O5O44_00135 (polA)
03410 Base excision repair
O5O44_00135 (polA)
03420 Nucleotide excision repair
O5O44_00135 (polA)
03440 Homologous recombination
O5O44_00135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alut03032
]
O5O44_00135 (polA)
03400 DNA repair and recombination proteins [BR:
alut03400
]
O5O44_00135 (polA)
Enzymes [BR:
alut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O5O44_00135 (polA)
DNA replication proteins [BR:
alut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O5O44_00135 (polA)
DNA repair and recombination proteins [BR:
alut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O5O44_00135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O5O44_00135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
WJJ96797
LinkDB
All DBs
Position
42838..45690
Genome browser
AA seq
950 aa
AA seq
DB search
MSDQKRLFLVDAYALIFRGYYAFIKNPRINSKGEDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSADRVEMYEDYKANRDETPEGIKTAVPHIYNILKAMHIPIMVKDGYEADDVIGT
LSRQAEKEGYKTYMVTPDKDFAQLVTDNIFMYRPVFGGGYETWGIPEVKKKFEVEDPMQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFIAQFGSMEGLLANTDQLKGKMKEKVEASKELG
MLSKKLATIMLDVPVEFNAKDFELDHPDIEKVKEIFQELEFRRLTDNFLKTFATETTDNA
SNQNTTTSPKTETASTPKEIKSAGAGQFSLFGADPSSQTETINEYTRKTAETTSHFYQSV
TPGMATKLFIKNLLSQTSVCFDTETTGLNPLTAELVGIAFSWEIGKGFYLPFPENKDEAQ
ELIEQLRPFFESESIEKVGQNLKYDIKVLAKYNVQVKGKLFDTMLAHYLINPDMRHNMDV
LAETYLNYTPISIETLIGKKGKNQLSMRDVPLEKQTEYAVEDADITLQLKEHFKNELGEA
NTQKLFDDIEIPLLRVLAAMELEGINLDKDFLNSLSEELNNDILNLEQRIYAAAGEEFNI
ASPKQLGIILFEKLKLVDKPKKTKTGQYATSEDILSYLAKEHDIIKDILEYRGLAKLKST
YVDALPLQVEESTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRNEE
YTLLAADYSQIELRIIAALSQEETMIEAFKNGEDIHASTASKVFNVPLNEVTREQRGNAK
TVNFGIIYGVSAFGLSNQTDLSRSEAKDLIDTYYATYPKLRSFIHEQVDFARDNGYVQTV
LGRRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMIHIYNKLQDGNFKTKMLL
QVHDELVFDVYKPELEAIKTLVKSEMENAFKLDVPLDVDLDTGDNWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaaaaacgcctttttttagtagatgcttatgccttaatttttcgcggctat
tatgcttttataaaaaaccctcgaattaactctaaaggtgaagatacttcggctattatg
ggtttcatgaactcattgttagatgtaattaaacgagagcgcccagaccatttagcagta
tgttttgacaaaggtggaagtgccgatcgtgttgaaatgtatgaggattacaaagccaat
agagacgaaacacccgaaggtataaaaacggctgttccgcatatttacaacattttgaaa
gccatgcacattcctattatggttaaagatggatatgaagccgatgatgtaattggaaca
ctctcaagacaagctgaaaaagaagggtataaaacgtatatggttacgcccgataaagat
tttgcacaattagttaccgataatatttttatgtaccgccctgtttttggtggtggttat
gaaacttggggcatccctgaagttaagaaaaaatttgaagttgaagaccctatgcaggtt
attgactttttaggcatgatgggagattccagtgataatattcctgggcttcctggagtt
ggtgaaaaaactgctaaaaaattcattgctcaatttggcagtatggaagggttattagcc
aacacagaccaactgaaaggtaaaatgaaggaaaaagttgaagcttccaaagaattaggt
atgctttctaaaaaattagctaccatcatgctggatgttccggttgaatttaatgcaaaa
gattttgaactcgatcatccggatattgaaaaggttaaagaaatatttcaagaattagaa
tttagaagattgaccgacaattttttaaagacctttgccactgaaacaactgataacgca
tcaaatcaaaatacaacaacaagtccgaaaactgaaacagcatcgactcccaaagagata
aaatcggccggagcaggacagttttcattattcggagcagacccttcaagccaaacagaa
acgattaatgaatatacccgaaaaactgcggaaaccacttcccacttctaccaaagtgtg
actcctggaatggctaccaagttgtttataaagaatttactaagtcaaacttcggtgtgt
tttgataccgaaaccacaggattaaacccattaacagccgaattagttggtattgcgttt
tcttgggaaattggcaaaggattttatttgccatttccagaaaacaaagatgaagcacaa
gaactgatcgagcaactgcgtccgttttttgaaagtgaatccattgaaaaagtaggtcaa
aatttaaaatacgacataaaagttctggcaaaatataatgtacaagtaaaaggcaaattg
tttgataccatgttggcacactacctcatcaatccagatatgcgtcataatatggatgtg
cttgccgaaacttatttgaattacacacccatttcaattgaaactttaattggcaaaaaa
ggtaaaaaccaattgtcaatgcgcgatgttcctctggaaaaacaaactgaatatgccgtt
gaagatgccgacatcacccttcagcttaaagagcattttaaaaatgaattaggcgaagcc
aatactcaaaaattatttgatgatattgaaattccgctactgcgtgttttagcagctatg
gagttagaaggtataaatctagataaagacttcttgaactcattatctgaagaattgaat
aatgatattttaaatcttgaacaacgaatttatgctgctgctggtgaagaattcaatatc
gcatcaccaaaacaactaggaataattctttttgaaaaattaaagttggttgataaacct
aagaaaactaaaaccggacaatacgcaacctcagaagatatcttgtcgtatttagctaaa
gagcacgacatcattaaagatattttagaataccgcggactagccaaattaaaaagcacc
tatgttgacgctttaccgcttcaggttgaagaaagtacaggtcgtgtacataccgattat
atgcaaaccgttgctgctacaggaagattaagtagtaataaccccaatttacagaacatc
ccaattaggaccgaacgtggtagacaagtgcgtaaagcattcatccctagaaatgaagaa
tacaccttgttagctgccgattattcgcaaatagaattacgcataatagcggctttaagt
caagaagaaaccatgattgaagcctttaaaaatggcgaagatattcacgcatctacagct
tcaaaagtatttaacgtgcctttaaacgaggtgacacgagagcaacgtggtaatgctaaa
accgtaaatttcggaattatatatggtgtatctgccttcggattaagtaatcaaaccgat
ttatcacgaagtgaagctaaagatttaattgacacttattatgctacttatccaaaactg
agaagttttattcatgagcaagtcgattttgctcgagataacgggtatgtgcaaaccgta
ttagggcgtcgcaggtacttaaaagacattaactctagaaatgctgtagttcgcggtgct
gccgaacgtaatgcagtaaatgcgcctattcaaggaagtgcagccgatattattaaaatt
gccatgattcatatttacaacaaactccaagacggcaattttaaaaccaaaatgctatta
caggttcatgatgaattggtttttgatgtgtacaaaccagagcttgaagccattaaaact
ttagtaaaatctgaaatggaaaatgctttcaaattagatgtaccacttgatgtggattta
gatactggtgataattggttggaggcgcattaa
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