Arabidopsis lyrata (lyrate rockcress): 9301352
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Entry
9301352 CDS
T01578
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
9301352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9301352
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
9301352
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
9301352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF3276
Motif
Other DBs
NCBI-GeneID:
9301352
NCBI-ProteinID:
XP_002863522
UniProt:
D7MKV2
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MGPDQEDLDLTNDDNFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVG
IKKIVHANCRIASVTDPSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYV
NIEYVHGSHGKKATSVKNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVI
KGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFV
KKIPIVIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKV
KKTSYGPPPEKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDD
KDYVGNKRLELSGQLMSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQ
NTISVGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGP
RSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSA
EELHTPDSFLVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASD
GGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYES
EATTELDEGAEAAKIKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMG
NIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAI
VMNKSSLDRGFGRCIVMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPG
EIIRPNDVYIYKQIPVCTTRDKITSPLSDSQYRPAREFFKGPEGETQVVDRVALCSDKSG
SLCIKYIIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSR
MTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYSG
LSGEPLEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMER
DCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGDNIATMKL
PYACKLLFQELQSMNVVPRLKLVEA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgggacccgatcaagaagatctagacttgaccaatgatgataatttcatcgacaaggaa
aagctttcagctcctatcaagtctactgcagataaattccagctcgttcccgagttcttg
aaggtgagaggacttgtgaagcaacacctggattcgttcaattactttatcaatgtcggg
ataaaaaagattgtccatgcaaattgtcgtattgcatccgtaacagacccatcaatctac
ctaaggtttaagaacgtcagagttggtgaaccgtcaattatgaacatcaatatatcagaa
gaaattaatccgcacatgtgccgattagcagacatgacatatgctgctccaatatatgtc
aatatagaatatgttcacggcagtcatggaaagaaagcaacaagtgtaaagaatgatttt
attatcggaaggatgcctatcatgttgcggagttgtcgctgtgtattacatggaaaagat
gaagaggaacttgcaagattgggtgagtgccctcttgatcctggaggatacttcgtcatc
aaaggaactgagaaggtgttgttgatacaagaacaactttcgaagaacagaattattatt
gattctgataaaaaagggaacataaatgcatctgtcacaagcagcactgaaatgacgaaa
agcaaaacagttattcagatggaaaaggagaagatatatttatttcttcatcaatttgta
aaaaagattccaattgtaattgtcctaaaagctatgggaatggagagcgaccaagagatt
gtacaaatggttggaagggatccccgttttagcgcatcactcttaccttctattgaggag
tgtgttagtgaaggtgtgaatacacaaaaacaagcactggactatcttgaggcaaaggtg
aaaaaaacatcatacggacctccacctgaaaaggatggaagagctctatacatcctcaga
gatttattccttgcgcatgtacctgtgcgtgacaacaattttcgtcaaaaatgtttctat
gttggcgtgatgttgagacgaatgattgaagcaatgttaaacaaagattcgatggatgac
aaggattatgttggtaacaagcggttggagttatctggacaactaatgtctcttctcttt
gaggatttgttcaaaacgatgctcagtgaggccattaaaaaagtagatgctattctttca
aaaccaagccgggctagccgatttgatttttctcagtatcttactactggagacagtcaa
aacactatttctgtaggactagaaagaaccctttcaacgggaaacttcgatattaaaagg
ttcagaatgcatagaaaaggcatgacacaggtcttaacaaggttatcttttatcgggagc
ttggggtttatcacgaaaatttcaccacaatttgaaaagtcaagaaaagtaagtgggcct
agatcattgcaacccagccagtggggcatgctctgcccatgtgataccccagaaggcgaa
tcttgtgggcttgtcaagaacttggctttaatgactcatgtcacaacggatgaagaggaa
ggcccattggttgctatgtgctacaaattgggtgttacagatctggaagtattatcagca
gaggagctgcatactccggactcatttttggtcatattgaatgggctaatacttggcaaa
catagaaggccacagtacttcgccaattcacttagaaggctgcgtagagctggaaaaatt
ggcgagtttgtcagtgtgttcacaaacgaaaagcagcattgtgtttacgttgcatctgat
ggtgggcgggtttgtcgtccacttgttatagccgataaaggaatatcaagagttaaacaa
caccacatgaaggaattacaggatggggttcgcacttttgatgactttattcgtgacggt
ttgatcgagtatcttgatgtcaatgaggaaaacaatgcattgatcgctttatatgaaagt
gaagccactacggaactggatgaaggagcagaagctgctaagataaaggcagacacaacc
cacattgagattgaacctttcaccatcttaggtgttgttgctggtcttattccttaccct
caccataatcagtcacctagaaatacgtatcagtgtgctatggggaaacaagctatggga
aatattgcttacaaccagttaaaccggatggacacattgctttacctattagtgtatcct
cagcgacccctgttgacaacaaggacaattgaattggttggatacgataaacttggagca
ggtcaaaatgcaacagttgctgttatgagtaattctggatatgacatagaggatgcaata
gtgatgaacaaatcttccttggatcgtggttttggccgctgcattgttatgaaaaaaatt
gttgctacatgccagaagtatgaaaacggtacagtagacagaatactcatgccacaaaga
acaggcccagatgcagaaaagatgcagatactggatgatgatggaattgcttctccaggg
gaaattatcagaccgaatgatgtttatatatataaacaaatccctgtgtgcacaacaaga
gataagattacatccccgctatctgatagtcaataccgtccggccagagagttttttaaa
ggtcctgaaggggagacgcaagtggtcgatagagttgctctctgttctgataagagtggc
agtttatgcatcaaatatatcatacgacatactcgtcgaccagagcttggcgacaaattc
agcagtaggcatgggcagaaaggtgtatgtggtacaattattcagcaagaagattttcca
ttttctgagcttggaatttgccctgatttgatcatgaatcctcatgggtttccaagtcgt
atgacagttggtaagatgattgaactccttggaagcaaggctggcgtttcgtgtggtaga
tttcattatggtagtgcttttggagaaagaagtggtcatgctgacaaggttgagactata
agtaagacccttgtggataaagggttttcatacagtgggaaggacttgttatactcaggt
ctcagtggcgagccattggaagcatacatctttatggggccgatatattaccagaaattg
aaacacatggttttggacaagatgcatgcgcgagggagtggaccacgtgtcatgatgaca
agacagcctactgaagggaaatctaagaatggaggtttaagagtgggagaaatggaacga
gattgtcttattgcttatggggccagcatgttgatctacgagcggctcatgatttctagt
gatccttttgaagttcaggtttgcagagcttgtggtttgttgggatattacaattacaag
cttaaaaaagcagtttgttcaacatgtaaaaatggcgataacattgctactatgaaactc
ccatatgcatgcaagctactattccaggaactccagtccatgaatgttgttccgcgtctg
aaacttgtagaggcttga
DBGET
integrated database retrieval system
