Arabidopsis lyrata (lyrate rockcress): 9306443
Help
Entry
9306443 CDS
T01578
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00270
Cysteine and methionine metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
9306443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9306443
03032 DNA replication proteins [BR:
aly03032
]
9306443
03036 Chromosome and associated proteins [BR:
aly03036
]
9306443
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
aly02048
]
9306443
Enzymes [BR:
aly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
9306443
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
9306443
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
9306443
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
9306443
Prokaryotic defense system [BR:
aly02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
9306443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
9306443
NCBI-ProteinID:
XP_020872430
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MERKAGKQKKRSVDSDDVSREKRPKRAAECTSFKEKSLRISKKSATVEAKKEQIVTEEIV
AIKLTFSLESNDDQPRPNRRLTDFVLLDSNGVPQPVEMLELGDIFIEGVVLPLGDEIMNE
KGVRFQSFGRVENWTISGYEDGSPVIWISTALADYDCRKPANSYKKMYDYFFKKAYACVA
VFKNLSKNPDTSLDELLAAVVRSMMSGSKIFSSVAAIQEFVIFQGEFIYNQLAGLDETAK
SHETSFVENPVLVSLRDKSSNFHKASSNVAMRIDESKAVTSDQLMDDAEDEDVRYTKFIR
DEEYRKSMDRARNKRSLTTSASNNFYTKINEDEIANDYPHPSYYKNTEKETDELVLFDPG
YEVDTRYLPWRTLHNWALYNSDSHFISLELLPMKPCDDIDVTVFGQIKEWTVEIGEEMVF
VILRTDLAWYRLGRPSKQYAPWFEPVLKTARVGRSILALLENEMRIPKLSYLYVIKRLSG
LEENDKAYISSKLLDVERYVVVHGQIILQLLREYPGIRRCPFVTCLASKMQDMHHTKCII
KKKKKILKKGKNLNLRVDMPRVVSKMKAMQATTTRLINRIWGEFNSIYSAEDSSEEIVAE
EEVEEEDENEEEDTIAKAAKVQNAATFKKIGIIWEGETLGTTRAGEPLYGQALVGGGKVV
VGGAVILEVGDQDEIYFVEYMFQNSDHYKMLHGKLLQRGSETVLGTAANERELFLTNVCL
TVQLKDIKATVNFEIRSRSWGHQYRKENMAADKLDRAREEERKAKDLPTEYYCKSFYSPK
RGGFFSLPRSDMGLGSGFCSSCKIRENEEERSKTKLNDSKTGFLSDGIEYSVGDYVYVIP
NYITKGKGKRRSMFKYGRNVGLKPFVVSQLLDIVLKEPKKGSSAPFEVGLRRFYRPEDIS
AELAYASEIQEVYYSQDTYILPPEAIKGKCEVMKKHDMPLCREYPVLDHIFFCERFYDSS
NDHLEKLPSNMKLKFSTIKDEKLLREKKGKGVLSETDSVMSVKPDEVPKEMRLATLDIFA
GCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRLCWDQLVEII
NDRAIMEKCGDVDDCISTTEAAELAAKLDESQKSILPLPGQVDFINGGPPCQGFSGMNRF
SDRSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTFNKGRTFQLTVASLLEMGYQVR
FGLLEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFNNPGFKISLSRRLHYAAVQST
KFGAPFRSITVRDTIGDLPPVESGESKINKEEMRGNKIVLTDHICQKMNELNLIRCKKIP
KTPGADWRDLPDENVKLSNGVVVKLIPSGLINKAKEHNGYRGLYGRLDWQGNLPTSITTP
QPMGWVGMCFHPDQDRIISVRECARSQGFPDSYEFSGKIKDKHRQIGNAVPPPLAFALGR
KLKEALATPQEFSSTVPILKEHPNEC
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaaagctgggaaacaaaagaagagaagtgttgactctgatgatgtctctagg
gaaaagaggccaaagcgagcagcagaatgtacaagcttcaaggagaaatctctacgtatc
tctaagaaatctgctactgttgaagccaagaaagagcagatcgtgacggaggagatcgtg
gcaataaagttaactttttctttggagagcaatgatgatcaacctcgtccaaaccggagg
ctaactgattttgttttacttgattcaaatggagttccacagcctgtggagatgttggaa
cttggtgacatttttattgaaggtgttgtcttaccgttaggtgatgagataatgaatgaa
aagggtgtgaggtttcaatcatttggtcgagtagagaactggactatatctgggtatgaa
gatggttccccggttatatggatctcaacagcgttagccgattacgattgtcgtaaaccg
gctaatagctacaaaaagatgtatgattatttctttaagaaagcttatgcttgtgtggcg
gtatttaagaacttgtccaagaatcctgatacaagtcttgatgagcttcttgcggcagtt
gttaggtcgatgatgagcggaagcaagatcttttctagcgttgcagccatccaagagttt
gttatattccaaggagaattcatatataaccaactcgctggtttggatgagacagccaag
agtcatgaaacaagctttgttgagaatcctgttcttgtttctttaagagataagagtagt
aactttcacaaggcttcgtctaatgtagctatgaggattgatgagagcaaggccgtgaca
tctgatcaactaatggatgatgctgaggacgaggacgtgagatatactaagtttatacga
gacgaagagtatcgtaaatctatggatcgggccagaaataagagaagcttaacaacttct
gcttcaaataatttttatactaagatcaacgaagatgagattgccaatgactatcctcac
ccatcttactataagaacaccgaaaaagaaacagatgagcttgtactttttgatcctggc
tatgaggttgatactaggtatctaccttggagaacacttcacaactgggcactatacaac
tctgattcacatttcatatctctcgagcttctcccgatgaagccatgtgatgatattgat
gtcaccgtctttggtcaaataaaggaatggacagttgagattggggaagaaatggtattt
gttatattacgaacagatttggcctggtatcggcttgggagaccgtcaaagcaatatgct
ccttggttcgaacctgttttgaaaacagcaagggtagggagaagcattttggccttgctc
gagaatgaaatgaggattcctaagctttcatacttatatgtcataaaaagactaagtggg
ttagaagagaatgataaagcttacatttcttctaaactcttggatgtagagagatatgtg
gtcgtccatggccaaattatcttgcagcttttgagagaatatcctgggatcagaaggtgt
ccatttgttacttgtcttgcaagtaaaatgcaggatatgcaccacacaaaatgtatcatc
aagaagaagaagaaaattttgaagaagggaaagaatctgaatctaagggtagacatgcca
cgtgtggtatccaagatgaaagccatgcaagcgacaacaactcggcttatcaatagaatt
tggggtgagtttaactccatttattctgcagaggattcgtcggaggagattgttgctgaa
gaagaggttgaagaggaggacgagaatgaagaagaggacactatagcaaaagctgctaag
gttcaaaacgctgctacttttaagaaaataggaattatatgggaaggtgagactctggga
acaactcgtgctggtgagcctctctatggacaagcccttgttggaggtggaaaggtggtt
gttggtggggcagtcatcttggaagttggtgatcaagatgagatctattttgtggagtac
atgttccagaattcagatcactataaaatgctacacgggaaacttttacaaagaggatct
gagactgttctagggaccgctgctaacgagagggaactgttcttgactaatgtatgcctt
actgttcagctcaaggacataaaagcaacagtaaattttgagattcgatcaaggtcgtgg
gggcatcaatataggaaagagaatatggctgcagataagcttgaccgggcaagagaagaa
gaaagaaaagctaaagatctgccaacagaatattactgcaaaagcttttattcacctaag
agaggtggattctttagtcttccaagaagtgatatgggtctaggttctggattctgcagt
tcatgtaagataagagagaatgaagaggaaaggtcaaaaactaaactcaatgattcaaag
acaggatttctctcggacggaatcgagtattctgttggggattatgtttatgtaatcccc
aactacataaccaaaggtaagggtaaaagaaggtcaatgttcaagtatggtagaaatgtt
gggcttaaaccttttgtggtttcccaattactggatattgtcctaaaagaacccaaaaaa
ggtagtagtgctccctttgaggttggcctgagacgtttttataggcctgaggacatttct
gcagaattggcctatgcttcagaaattcaagaggtttattatagccaggacacatatatc
ctccctccagaggctataaaaggaaaatgtgaagtaatgaagaaacatgatatgccctta
tgccgtgaatatccagtattagaccatatcttcttctgtgaacgtttctatgactcctcc
aatgatcatctcgagaagttgccttccaatatgaagctgaagttctctactattaaagat
gaaaaacttttaagagaaaaaaaggggaagggagtattgagtgaaactgactctgtgatg
agtgtgaagcctgatgaggtacctaaagagatgcgtctagctacactagatatttttgct
ggatgtggtggcctgtcttatggactagaaaaggcgggtgtatcggatacaaagtgggcg
atcgagtatgaagagccagctgcgcaagcttttaaacaaaaccatcccaaaacaacggtt
tttgttgataactgcaatgtgattcttaggttgtgctgggatcagttggttgagattatt
aatgacagggctataatggagaaatgtggagatgtggatgattgtatatctactacggag
gcagctgaacttgcagctaaacttgatgagagccagaagagtattctgcctttgcctggt
caagtggatttcatcaacggagggcctccatgccaagggttttctggtatgaacaggttt
agtgaccgctcttggagtaaagtccaatgtgaaatgatattagcatttttgtcttttgct
gattatttccggccaaagtattttcttctcgagaacgtgaagaaatttgtgacattcaat
aaagggcgaacatttcaacttactgtggcttctcttcttgaaatgggttaccaggtaaga
tttggactcttggaggcaggagcatatggaatatctcaacctcgtaaaagagctttcatt
tgggcagctgcaccaaacgaagttcttccggaatggcctgagccgatgcatgtctttaat
aatccgggttttaaaatctcattatctcgacgtttgcattatgctgctgttcaaagtact
aaatttggtgcacctttccgttcaatcacggtgagagacacgattggcgatcttccacca
gtagaaagcggagaatccaagataaacaaagaggagatgagaggtaacaagattgttctt
actgatcatatctgtcaaaagatgaacgaactaaacctcatacgatgtaaaaaaattcca
aagacccccggtgctgattggcgtgacctaccggacgaaaacgtgaagttatcaaatggg
gttgtggtaaaacttattccttctggtttgataaacaaagctaaggagcacaacggttat
agaggactctatggtaggctggactggcaaggcaatttacccacttccatcaccactcct
caacccatggggtgggtgggaatgtgcttccatcctgaccaggacagaattatcagtgtt
cgtgaatgcgctcgatctcaggggtttccggacagctatgagttttcaggaaagataaaa
gataaacataggcagattgggaatgcagtccctccaccattggcgtttgctcttggtcgg
aagctcaaagaagccctagctacacctcaggagttctcgtcaacagtaccaatattaaaa
gaacatccaaatgaatgttag
DBGET
integrated database retrieval system
