Arabidopsis lyrata (lyrate rockcress): 9308928 Help Entry 9308928           CDS       T01578                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03430   Mismatch repair Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     9308928  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:aly03400]     9308928 DNA repair and recombination proteins [BR:aly03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      9308928 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor Motif Other DBs NCBI-GeneID:  9308928 NCBI-ProteinID:  XP_002874942 UniProt:  D7M456 LinkDB All DBs Position Unknown AA seq 1326 aa AA seqDB search MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKPNPNPNSPSP SPSPPKKTPKLNPNPSSDPPARSPSPGPATPSPVQSKFKKPLLVIGQTPSPPQSAVITYG DEVVGKQVRVYWPLDKKWYDGSVTFYDKCECKHVVEYEDGEEESLDLGKEKIEWVVGDKS GDRFKRLRRGASALRKVVTDDDDDVEMGNVEEEKGDKSDGDDSSDEDWGKNVGKELCESE EEDVELVDENEMDEDELVEEKDEETPKGSRVSKTDFRKRKTSEVTKSGGEKKSRTDKDTI LKGFKASVVEPPMKIGEADRVVKNLEDNILDGDALARFGARESEKFRFLGVDRRDAKRRR STDENYDPRTLYLPPDFVKKLTGGQRQWWEFKSKHMDKVVFFKMGKFYELFEMDAHVGAK ELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSKDKV VKREICAVVTKGTLTDGEMLLTNPDASYIMALTEGGECLTDQTAEHNFGVCLVDVATKKI MLGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSSATERTIVRQTRNPLVNNLVPFSEFW DSEKTIHEVGIFYKRISCQPSSAYSSEGKIPGDGSSFLPKILSELATEDKNGSLALSALG GAIYYLRQAFLDESLLRFAKFESLPCCDFSNVNEKQHMVLDAAALENLEIFENSRNGGYS GTLYAQLNQCVTASGKRLLKTWLARPLYNPELIKERQDAVAILRGENLPYSLEFRKALSR LPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKEVQEFISTLRGCETMAEACSSLRAIL KHDKSRRLLHLLSPGQILPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEFDCACKTV EEFESNLKKHLKEQRKLLGDPSINYVTVGKDEYLLEVPEILSGSVPHDYELCSSKKGVSR YWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAF ASDSYEGVRCRPVISGSTSDDVPHLSATGLGHPVLRGDTLGRGSFVPNNVKIGGSEKASF ILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDRICVRMGAKDHIMAGQST FLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIDKVQCRGLFSTHY HRLSVDYQTNPKVSLCHMACQVGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDY VLQRAVIKSQEFEALYGKKQRTTDHKMAAMIKQIISSVASDSDYSASKDSLSELHSMANT FLRLTN NT seq 3981 nt NT seq  +upstreamnt  +downstreamnt atggctccgtcacgccgacagatcagcggaagatctccgttggtgaaccagcagcgtcaa atcacctccttctttggaaaatctgcttcctcttcttcttctccgtctccatcaccttca ccatctctctccaataagaaaacccccaaacctaaccctaaccctaattctccgtctccg tcaccatctccgcctaagaaaacccctaaattgaatcctaaccctagttctgatcctcct gctcgtagtcctagccctggtcctgcgacgccttctcctgtacagtccaagtttaagaag ccccttctcgtcatcggacagacaccttcgcctcctcaatcggcggtaattacttacggt gacgaggtggtggggaagcaagttagggtttattggccgttggataagaaatggtatgat gggagcgtgacgttttatgataagtgtgagtgtaagcatgtggttgagtatgaagatggg gaagaagagtctttggatttagggaaggagaagattgagtgggtggttggggataaatca ggagataggtttaagcgattgagacgaggcgcttcggctctcagaaaagttgtgacggat gatgatgatgatgtggagatgggtaatgtggaagaagagaaaggagataaaagtgacggt gatgattctagcgatgaagattggggaaagaatgtggggaaggagttatgtgagagtgaa gaagaggatgtggagttggttgatgagaatgagatggatgaagatgaactggtggaagag aaagatgaagaaactcctaaaggaagtagagtttccaaaactgactttagaaagcggaag actagtgaagtaacgaaatcaggtggtgagaagaaaagcaggactgataaagacactatt ttgaaaggttttaaggcttctgttgtggagcctccaatgaagattggagaagctgatagg gtggtcaagaatttggaagataacatattggatggagatgctcttgctagatttggtgct cgtgaatctgagaaattccgcttcctgggagtagaccgaagggatgctaaaaggagacgc tctactgatgagaattatgatccaaggacactataccttccgcctgattttgtgaaaaaa ttaacagggggccagagacaatggtgggagtttaaatcaaagcatatggacaaagttgta ttcttcaagatgggtaaattctatgagctttttgagatggatgcacatgtaggagctaag gaactggatatacagtacatgaagggagaacaacctcattgtggatttccggagaagaat ttctctgtaaacattgagaaattagttagaaagggctatcgggttttagttgtggagcaa acagaaacacctgatcagctggagcaacgccggaaagagacaggctccaaggataaagtt gtgaagcgcgaaatatgtgcagttgttacgaaaggaacgctgacagatggggagatgcta ttaactaatccggatgcatcttatataatggccttgactgaaggaggagaatgtttaact gatcagacagcagagcacaattttggtgtctgtttggttgatgttgcgacaaagaagata atgctgggccagttcaaggatgatcaagactgcagtgcattatcttgcctgctatctgag atgaggccggtggaaattattaaaccagctaaggtgttgagttctgcaacagagagaaca atagttagacaaaccagaaatcccttagtaaataatctggtcccattttctgaattttgg gattcagagaagaccatacatgaagttggaattttctacaagcgaatcagttgtcaaccg tcttctgcttattctagtgaaggaaagattccaggtgatggttcaagcttccttccaaaa atattgtctgaattagcaactgaagataaaaatggtagcctagcgctctctgctcttggt ggtgccatttactacctgcgacaagcattcttggacgagagtctgcttagatttgccaag tttgaatccctgccttgctgtgatttcagcaacgttaatgagaaacagcacatggttctt gatgctgctgctcttgaaaaccttgaaatatttgaaaacagtagaaatggaggctattcg ggaacgctgtatgctcaactgaatcaatgtgtcactgcatctgggaaacggttacttaaa acatggctggcgagacctttatataatccggaactgatcaaggaacgacaagatgctgta gcaattctgcggggtgaaaatcttccgtactcactggagtttcggaaggcgttgtccaga cttccggacatggaacggttgattgcacgtatgttttctagcattgaagctagtggaaga aatggcgataaagtggtgttatatgaagatacggcaaagaaggaggtacaagaattcata tcaactctacgtggttgtgaaacaatggcagaagcatgctcttctctccgtgctatcttg aagcacgataaatccaggcggctgcttcatttactatctcctggtcaaattcttccgaac atatcttcctccattaagtatttcaaggatgcttttgactgggtagaagctcacaattct ggtcgtgtaataccccatgaaggagctgatgaagagtttgattgtgcctgcaaaacagta gaagaatttgagtccaatttgaaaaaacatctgaaagagcaacggaaattactcggagat ccatctataaactatgttactgttggaaaagatgaatacctcttggaagttcctgaaatt ttaagtgggagtgttcctcatgattatgaattatgctcatcgaaaaagggtgtctctcga tattggactcctaccataaagaaattattaaaagagctgtcacaagcaaaatctgaaaaa gagtcggctctgaagagcatttcacagagattgattggacgtttctgtgagcatcaagaa aaatggagacaattggtttctgcaacagctgagctggacgtgttgatcagcctcgctttt gcaagtgattcttatgaaggagtaagatgccgcccagtaatatcaggttctacatctgat gatgttccacacttgtctgccactggtctagggcatccagttctaaggggtgatactcta ggcagaggttcttttgtaccaaataatgtaaagataggtggttctgagaaagccagtttc atcctcctcacaggccctaatatgggtggaaaatcaaccctacttcgccaagtttgcttg gctgtaatcttggctcaaattggagcagatgtcccagcagaaacctttgaggtttcgcct gttgacagaatttgtgtccggatgggtgcaaaagatcatattatggcaggacaaagcacg ttcttaacagaactttcagaaactgcggtaatgttgacatcagctacccgaaactctttg gtggtactagatgagcttggacgaggaacagccacatcagatggacaagccattgcggaa tctgtacttgagcacttcatagacaaggtgcagtgtagaggattgttctctactcattat catcgtctatctgtggattatcaaaccaatccaaaggtctcactttgccatatggcatgt caagtaggagaaggaattggtggagtagaagaagttacatttctctatagactgacgcct ggtgcatgtcctaaaagctatggagttaacgttgctcggctagctggtcttccagattac gtacttcagagagcggtgataaaatcccaagaatttgaggccttgtatggtaaaaaacag agaacaactgatcataaaatggcagcaatgataaagcagatcatcagcagtgttgcatca gattctgattactcagcttcaaaagactcattgtctgagctacactccatggccaataca tttctccggttaaccaactga

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