Arabidopsis lyrata (lyrate rockcress): 9310139
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Entry
9310139 CDS
T01578
Name
(RefSeq) poly [ADP-ribose] polymerase 3 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
9310139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9310139
03036 Chromosome and associated proteins [BR:
aly03036
]
9310139
03400 DNA repair and recombination proteins [BR:
aly03400
]
9310139
Enzymes [BR:
aly01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
9310139
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
9310139
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
9310139
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
9310139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
PADR1_N
PADR1_Zn_ribbon
WGR
BRCT
BRCT_2
BRCT_3
RTT107_BRCT_5
Mvb12
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
9310139
NCBI-ProteinID:
XP_002872003
UniProt:
D7M0X8
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MKVHETRSHAHMSGDEQKKGNLRKHKAEGKLPEAEQSQKKAKSENDNGRSVNGAGDAASE
YNEFCKAVEENLSVDQIKEVLEINGQDCSAPEETLLAQCQDLLFYGALEKCPLCGGNLIC
DNEKRFICGGEISEWCSCVYSTKDPPRKEEPVKIPDSVMNSAISDLIKKHQDPKSRPKRE
LGSADKPFAGMMISLMGRLTRTHQYWKKKIERNGGKVSNTVQGVTCLVVSPAERERGGTS
KMVEAMEQGLPVVSEAWLIDSVEKHEAQPLEAYDVVSDLSVEGKGIPWDKQDPSEEAIES
LSAELKMYGKRGVYMDTKLQERGGKILEKDGLLYNCAFSICDLGKGRNEYCIMQLITVPE
SNLNMYFKRGKVGDDPNSEERLEEWEDEDAAIKEFARLFEEMTGNEFEPWEREKKIQKKP
HKFFPIDMDDGIEVRSGALGLRQLGVASAHCKLDSFVANFIKVLCGQEIYKYALMELGLD
PPDLPMGMLTDVHLKRCEEVLLEFVDKVKTTKETGQKAEAMWADFSSRWFSLLHSTRPMR
LHDVHELADHAASAFETVRDINTASRLIGDMRGDTLDDPLSDRYNKLGCKISVVDKESED
YKMIVKYLETTYEPVKVSDVEYGVSVQNVFAVESNAIPSLDDIKKLPNKVLLWCGSWSSN
LLRHIYKGFLPAVCSLPVPGYMFGRAIVCSDAAAEAARYGFTAVDRPEGFLVLAVASLGE
EVTEFTNPPEDTKTLEEKKIGVKGLGRKKTEESEHFMWRDDIKVPCGRLVPSEHKDSPLE
YNEYAVYDPKQTSIRFLVEVKYEEKGTEIVDVEPE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtacacgagacaagatctcacgcacacatgtctggggacgaacaaaagaaggga
aatttgcggaagcacaaagcagaagggaagcttccagaagctgaacagtctcagaagaag
gcgaagtcggaaaacgataacggccgttcagtcaacggtgccggagatgctgcttctgag
tacaatgagttttgcaaagcggttgaggagaatctgtccgttgatcagattaaagaagtt
cttgaaatcaacggtcaagattgttctgctccagaagagaccttgcttgctcaatgtcaa
gatttactattctatggggcgttagaaaaatgtcctttatgcggaggtaatttgatttgt
gacaatgaaaagagattcatatgtggaggtgagattagtgagtggtgcagttgcgtgtat
agtacgaaagatcctcctagaaaggaagagccagttaaaatccctgattccgtcatgaac
tctgctatttctgatttgatcaagaaacaccaggaccctaaaagtcgacctaaaagggag
ttaggctctgctgataaacccttcgcgggaatgatgatctctctcatgggacgtctcacc
agaacacatcaatattggaagaaaaagatcgaaagaaacggtgggaaagtctccaatact
gttcaaggtgtaacatgtttggtggtttcgccggctgaaagagaacgaggtggtacgtca
aagatggtggaggcaatggaacaaggtctacctgttgtgagtgaagcatggttgatcgat
agcgtggagaagcatgaagctcagccacttgaagcttatgacgtggtcagtgatctttct
gtggaagggaaaggaattccatgggataagcaagatcctagtgaggaggcgattgaatcc
ttatcagctgagctcaaaatgtatgggaaaagaggagtctacatggacacaaaacttcag
gagagaggaggaaaaatcttggagaaagatggactcttgtataactgtgccttctcgata
tgcgatttgggaaaagggcgtaatgagtattgtattatgcagctaatcacggtgccagag
agcaacctgaatatgtacttcaagagaggaaaagtaggagatgaccctaattcggaagag
aggctcgaggagtgggaggatgaagatgctgcgatcaaagagtttgcaaggctctttgag
gagatgacaggaaatgaattcgagccatgggaacgtgagaaaaagattcaaaagaagcct
cataagtttttcccaattgatatggatgatggaatcgaagtgagaagtggggcacttggt
ctaaggcagcttggcgttgcttctgcacattgcaagcttgattcgtttgttgcaaacttc
attaaagttctgtgtggtcaagagatatacaagtacgcgttgatggagcttggattggat
cctcctgatctacctatgggaatgctaactgatgtccacttgaaacgatgcgaagaggta
ttactggagtttgttgataaggtcaagacaacaaaggagacaggtcagaaagctgaagca
atgtgggcagacttcagctcccggtggttttcattgctacacagcacaaggccgatgcga
ttgcacgatgtccatgaacttgcagaccatgcggcctctgcttttgagacggtgagggac
ataaacacagcatctcgtttgataggggatatgcgaggagacacactcgatgacccgttg
tctgatcggtacaacaaacttggttgcaagatttctgtggtagacaaggagtctgaagat
tacaagatgattgttaagtaccttgagactacttatgagcctgtgaaagtctctgacgtt
gagtatggtgtgtcagtgcagaatgtttttgcggttgagtcaaacgcaattccttcatta
gatgacatcaagaagctaccgaacaaagttcttttatggtgtggttcatggagttcaaat
ctgttgagacatatctacaaagggttcttacctgctgtctgctctcttccagtccccggt
tatatgtttgggagagcgatagtgtgttcagatgcagctgcagaagctgcaaggtacggt
ttcacagctgtggatagaccagaagggtttcttgtattagccgtcgcttcccttggtgag
gaagttacagaattcacaaatccaccagaggacacaaagacattggaagagaagaagata
ggagtgaaaggattagggaggaagaaaactgaagagtcggagcatttcatgtggagagat
gacataaaggttccttgcggacgattggttccatcagaacataaggacagtcctcttgaa
tacaacgagtacgcggtgtatgatcccaaacagacaagtataaggttcctggtggaagtg
aagtacgaggagaagggaactgagatagtcgatgtcgaaccagagtag
DBGET
integrated database retrieval system
