Arabidopsis lyrata (lyrate rockcress): 9311349
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Entry
9311349 CDS
T01578
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9311349
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9311349
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9311349
03036 Chromosome and associated proteins [BR:
aly03036
]
9311349
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
9311349
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
9311349
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
9311349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EZ
Adaptin_N
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
9311349
NCBI-ProteinID:
XP_002876929
UniProt:
D7LQU7
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MSMIDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEYAHVLLPPLETLSSVEETCVREKAVESLCRVGSQMKES
DLVDHFIPLVKRLAAGEWFTARVSACGVFHIAYPSAPDMLKTELRSLYTQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDIMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVQ
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPEIAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPVVMTASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPGLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgatcgatgagccgttgtatccaatcgctgtgcttatagacgagttaaaaaac
gatgatattcagcttagattgaattccattagaagactttctacaattgctcgtgctctt
ggtgaagagcggactaggaaggagttgattccttttcttagtgaaaacaatgacgatgat
gatgaggttttgttggcaatggctgaagaattgggtgtgtttattccttatgttggaggt
gttgagtatgcacatgttttgcttccgccgttggaaactctttcgagtgttgaagaaact
tgtgtgagggagaaagctgttgagtcgctttgtagagttggttctcagatgaaggagagt
gacttggttgatcatttcataccattagttaagcgacttgcggctggtgagtggtttaca
gctagagtatcagcttgtggggttttccatattgcatacccaagcgcgccggatatgttg
aagactgagttaagatcgttatatacccagctctgtcaggatgatatgccaatggtgcgg
agagctgcagctaccaatctggggaaatttgctgctacaattgaatcagcgcatttgaag
acagacattatgtccatgtttgatgatcttactcaagatgatcaagattctgttagatta
ttggccgttgagggttgtgctgctcttgggaaattgttggagccccaggactgtgtccaa
cacattcttcccgtgattgttaatttctcgcaggataagtcttggcgtgtgcgctatatg
gttgcaaatcaactctacgagctttgtgaagctgtgggacctgagcctactaggacggag
ctggtgcctgcatatgtgcgtctacttcgtgataatgaggctgaagttcgcatagcagct
gcaggaaaagttacaaagttttgtcggattctaaaccctgaaattgctatccagcacatt
ctcccctgtgtgaaggagctatcatcggactcttctcagcatgtcagatctgcattggcc
tcagttataatgggaatggctcctgtcttgggtaaggatgcaacaattgagcatctcctt
ccaatctttctttctctattgaaagatgagttcccggatgtacgcttgaacattatcagc
aaactcgaccaagtgaatcaggttattgggattgatctactatcacaatccttgctgcca
gctattgtagaacttgctgaagatagacactggagagtaagacttgctataattgagtat
atccctttgttggcaagtcagttaggtgttggcttctttgacgataagcttggtgctctt
tgcatgcaatggttacaagacaaggttcactcaatccgcgatgctgctgctaacaatctc
aagcggcttgctgaggaatttggtcctgaatgggcaatgcaacatatagttcctcaggtt
cttgagatgattaacaaccctcactatctctaccgaatgaccattttgcgcgcggtttct
cttcttgcaccagtaatgggctcagaaatcacatgctctaagctcttgcctgtagtaatg
actgcatctaaagacagagttccaaacatcaaattcaatgtagcgaaagtgcttcaatcc
ctcattccaatagtcgatcaatcggttgtggaaaagacgattcgtcctgggcttgtggag
ctaagcgaggatccagacgttgatgtcaggtttttcgcaaaccaagctcttcaatctatt
gacaatgtgatgatgtctagctaa
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integrated database retrieval system
