Arabidopsis lyrata (lyrate rockcress): 9312363
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Entry
9312363 CDS
T01578
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9312363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9312363
04147 Exosome [BR:
aly04147
]
9312363
04090 CD molecules [BR:
aly04090
]
9312363
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9312363
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9312363
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9312363
CD molecules [BR:
aly04090
]
Proteins
9312363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_21
AAA_16
AAA_15
AAA_30
ABC_ATPase
HTH_psq
Motif
Other DBs
NCBI-GeneID:
9312363
NCBI-ProteinID:
XP_020880106
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MMISRGLFGWSPPHMQPLTPVSEVSEPPESPSPYLDPGAESGGGTGAAAAQAEADEEMDE
QDEVEPPPAAVPFSQLFACADRFDWGLMIVGSVAAAAHGTALIVYLHYFARIVDVLAFST
DSSQQRSEHQFDRLVELSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQVLLN
QDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIGFVNCWEIAL
ITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAISYIRTLYAFTNETLAKYS
YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWIGRFFVHNGRANGGEIIAALF
AVILSGLGLNQAATNFYSFDQGRIAAYRLFEMITRSSSGVNQEGAVLASVQGNIEFRNVY
FSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENI
KNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKIAHAHTFISSLEKG
YETQVGRAGLAMTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERIVQEALDLLMLG
RSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELINLGGLYAELLKCEEATKLPRRMP
VRNYKESAVFQVERDSSAGCGVQEPSSPKMIKSPSLQRGNGVFRPQELCFDTEESPKDHS
PAPEKMGENGLPLDDADKEPTIKRQDSFEMRLPDLPKIDVQCPRQKSNGSEPESPVSPLL
TSDPKNERSHSQTFSRPLSSPDDTTANGKASKDAQHKESPSFWRLAQLSFPEWLYAVLGS
LGAAIFGSFNPLLAYVIALVVTAYYKSKGGHLREEVDKWCLIIACMGIVTVVANFLQHFY
FGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSPDTLSMRLANDATFVRAAFSNRLSIF
IQDSFAVIVALLIGLALGWRLALVALATLPILTLSAIAQKLWLAGFSKGIQEMHRKASLV
LEDAVRNIYTVVAFCAGNKVMELYRMQLQRILRQSYLHGMAIGFAFGFSQFLLFACNALL
LWCTALSVNRGYMKLSTAITEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVP
TIEPDDNSALKPPNVYGSIELKNIDFCYPTRPEVLVLSNFSLKVSGGQTVAVVGVSGSGK
STIISLVERYYDPVAGQVLLDGRDLKLYNLRWLRSHMGLVQQEPIIFSTTIRENIIYARH
NASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTPGQKQRIAIARVVLKNAPIIL
IDEASSAIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTH
DSLAAKNGLYVRLMQPHFGKGLRQHRLI
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctctagaggtttattcggatggtctccgcctcatatgcaaccactaactcca
gtctctgaagtctccgagcctcctgagtctccttctccttatctcgaccctggtgctgag
tctggtggtggcacaggtgccgcggcggcgcaagcggaggctgatgaagagatggatgag
caagatgaggttgaaccacctcctgctgctgttcctttctctcagctcttcgcttgcgct
gaccggttcgattgggggcttatgattgttggctctgttgctgctgctgctcatggtact
gcgcttattgtctacttgcattacttcgccaggattgttgatgttcttgctttctctact
gattcgagtcagcagagatctgaacatcagtttgaccgactcgttgagctttcgttgact
attgtgtacattgccggaggtgttttcatttctggttggattgaggtgtcttgctggata
ctgacgggagagaggcagactgctgtgatcaggtccaagtatgtccaagtattattgaat
caagatatgagtttctttgatacgtatggtaataatggagatattgtgagccaagtgcta
agcgatgtcttactcattcagtcagctttaagcgaaaaagttggaaattatattcataac
atggctacgtttatcagtggacttgttattggatttgtcaactgctgggaaattgcattg
attacactagccaccggtcctttcatcgttgctgctggaggcatatcaaatatatttctc
cacagacttgctgagaacatacaagacgcatatgctgaagcagccggtattgctgaacag
gcgatctcttacattaggactttatatgcctttacaaatgaaactctagcaaaatattca
tatgcaacttcccttcaagcaaccttgagatacggcatattaattagtcttgtgcaaggc
cttggacttggatttacttatgggcttgctatatgctcgtgtgcgctgcaactttggatt
ggacgattctttgttcacaatggaagggcaaatggtggagaaatcatagcagctcttttt
gctgtaattttaagtggcctagggttaaatcaagctgctacgaacttctattcttttgat
caaggaaggattgctgcgtatagactttttgagatgataactcgttcatcttctggggtt
aaccaagaaggagctgtgctggcttctgttcaaggaaacattgagttccggaatgtatat
ttcagttatttgtcacgacctgaaattccaatcttgagcggattttacctcacggttcct
gctaaaaaagcagttgcacttgttggtagaaatggttctggaaaaagcagcatcattcct
ttaatggaacggttttatgatccaacattaggagaagttcttcttgatggagaaaatatt
aaaaatctaaaactggagtggctgagaagccaaatagggctggttacccaggagcctgct
ctgctaagcttgagcataagagagaatattgcgtatggtcgtgatgctactcttgatcag
atagaggaggcagctaaaattgcgcatgcacacacatttatcagctcacttgaaaaagga
tatgaaacgcaggttgggagagccggtttagcaatgacagaggagcagaaaattaaactt
tcgattgctagagctgtgcttttgaatccaacaattcttctgcttgatgaagtaactgga
ggattagacttcgaagctgaaagaattgtgcaggaagcgcttgatcttctgatgttggga
cgatcaaccataataatagcccgacgattaagtttgataaaaaatgctgactatattgcc
gtgatggaggagggtcagctcgttgaaatgggtacacacgatgaattgataaatcttggt
gggctgtatgctgagcttctgaagtgtgaagaagcaacaaagcttccaagaaggatgcca
gttaggaactacaaggagtctgcggtgtttcaggtcgagagagactcttcagctggctgt
ggcgtccaagaaccatcatcacccaaaatgatcaagtctccatctcttcaaagaggtaat
ggtgtgttccgtccccaggaactgtgttttgatactgaagaatcacctaaagatcatagc
cctgcacctgagaaaatgggggaaaatggcttgcctctggacgatgctgataaagagcca
actatcaaaaggcaagatagtttcgagatgaggttaccagaccttccaaaaattgacgtt
cagtgtccccgacaaaaatcaaacggctcagagccagagtcccctgtttcaccccttttg
acatcagatcctaaaaacgagcgttcccattcgcagacgtttagtcgtcctcttagttct
ccagatgacactactgcaaatggtaaggcgtctaaggatgctcaacacaaggagtcacct
tcattttggaggttggcacagcttagtttcccagagtggctttatgctgtattaggaagt
ctcggtgctgccatctttggttctttcaatcctcttctggcttatgtcattgcgttggta
gtgacggcatattataaaagcaaaggaggccacctgcgcgaggaggttgacaaatggtgt
ttgatcattgcctgcatggggattgtgacagttgttgccaatttcttgcagcacttctat
tttgggataatgggggagaaaatgacagagagagttcggaggatgatgttctcagcaatg
ctgcgtaatgaagttggatggttcgatgatgaagagaacagtccagatacgttatccatg
cgtttagcaaatgatgctacttttgtccgagctgcgttcagcaacaggctttcaatattt
attcaagatagttttgctgttatagttgctcttcttatcgggttggcgcttggttggcgt
ttggcccttgttgcattggcaactctgccaattctcactctttctgccattgctcagaaa
ctgtggcttgccggattctcaaaaggcatacaggagatgcatagaaaggcatctttagtc
ctcgaggatgctgttagaaacatctacactgttgttgctttctgtgctggtaacaaagtg
atggaactgtacaggatgcaactccagcggatactcagacagagctatctccatgggatg
gctataggttttgcgtttggtttttcacagtttcttcttttcgcctgcaatgcgctcctc
ctatggtgcactgcattatctgtcaaccgtggatatatgaagttatcaacagctataaca
gagtacatggttttctcatttgctacattcgcccttgtcgagccatttggattagcaccg
tatattctcaagcgacgaaagtctctgatttcagtgtttgaaatcatagatcgagtccct
acaattgaaccagatgataactctgctctcaaaccgcctaatgtctacggaagcattgaa
ttgaaaaacatagacttctgctacccaactcgacccgaagtactagtgctgagcaacttc
agtctcaaagtcagtggcggacagacagtagctgtggttggcgtttcaggttctggaaaa
agcacaataatctcactggtagagagatactacgacccagttgctggtcaagtcctacta
gatgggagagacttaaagttatataatttgagatggttgagaagccacatgggtttggtt
cagcaagaacccataatcttttccacgacgatcagagagaatatcatatatgcaaggcat
aatgcaagtgaagctgagatgaaggaagcagcaagaattgctaatgctcaccatttcatc
agcagcttacctcacggttacgacacacatatcgggatgagaggggtagaacttaccccg
ggacagaaacagagaatagcaatagcacgggtagtgctgaagaatgctcccattatctta
atagatgaagccagctcggctatcgaatctgaatcgagtcgggttgtgcaggaggctctt
gacacattgataatggggaacaaaacgacaattctgatagcgcatagagcggctatgatg
agacatgtggataacattgtggtgctcaatggagggaggatagtagaggaaggtacacat
gattctttagcagcaaagaatggattgtatgtacgtttgatgcaaccacattttggtaaa
ggtctacgacaacatcgactgatatag
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integrated database retrieval system
