Arabidopsis lyrata (lyrate rockcress): 9314944
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Entry
9314944 CDS
T01578
Name
(RefSeq) biotin--protein ligase 1, chloroplastic isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00780
Biotin metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
9314944
Enzymes [BR:
aly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
9314944
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
9314944
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
9314944
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
9314944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_LplA_LipB_2
Condensin2nSMC
Motif
Other DBs
NCBI-GeneID:
9314944
NCBI-ProteinID:
XP_020885080
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MEAVRLTTLSNFHLLNILVLRSLKPLRRLSFSVSASAMESDASCNLVLYGKSSVETEIAK
CLKNKNSLTLPDNTKVSLFLESEAKNLVKDDGSFNLSLFMNSIITHRFGRFLIWSPRLSS
THDVVSQNFSELPVGSVCVTDIQFKGRGRTKNVWESPKGCLMYSFTLEMEDGRVVPLIQY
VVSLAVTEAVKDVCDKKGLPYIDVKIKWPNDLYLNGLKVGGILCTSTYRSKKFHVSVGVG
LNVDNEQPTTCLNAVLKGMSPESTLLKREEILGAFFHKFEKFFDLFMDQGFKSLEELYYR
TWLHSEQRVTVEEKVEDQVVQNVVTIQGLASSGYLLAIGDDNQMYELHPDGNSFDFFKGL
VRRKI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagttcgtttaacaactttatctaattttcatctactgaatattttagtcctg
cgttctctcaagcctctgcgtcgtctatctttctctgtctctgcctcagcaatggagagt
gatgcttcttgtaacttggttttgtatgggaagtcctctgtggaaactgagatagcaaag
tgtttgaagaacaagaactcacttacactcccggataataccaaagtttcactcttttta
gaatctgaggctaagaatttggttaaagatgatggttctttcaatctttcactctttatg
aactcgattataactcatcggtttgggcggtttctcatttggtctccgcgcttgtcttcc
actcacgatgttgtttctcaaaatttctctgagcttccagttggttcagtttgtgtcaca
gatatccagtttaaaggtcgaggtagaacaaagaatgtatgggaatcaccaaagggttgt
cttatgtattcttttactctagaaatggaagatggtcgagtcgtgcctttgatacagtat
gtggtgtctcttgctgtaactgaggcagtgaaagatgtttgtgacaagaagggtttgcca
tacattgatgttaaaattaagtggccaaatgatctctacttgaatggtcttaaggttgga
ggcattttgtgtacctctacgtatagatcaaagaagttccatgtcagtgttggtgtgggg
ttgaatgtggacaacgagcaaccgacgacgtgcttaaatgcagtactaaaaggcatgtct
cctgaatcaacccttcttaaaagagaggaaatccttggtgccttctttcataaatttgaa
aaattctttgatctattcatggaccaaggttttaaatctctggaggagctttactacaga
acatggttacacagtgagcaaagagtgactgttgaagaaaaagtagaggaccaagttgtt
caaaatgttgtgactatccagggtttggcatcttcaggatatttactggctattggagat
gacaatcaaatgtatgagcttcaccctgatggcaacagttttgactttttcaaaggtctg
gttcgaagaaaaatatga
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