Arabidopsis lyrata (lyrate rockcress): 9318724
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Entry
9318724 CDS
T01578
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00906
Carotenoid biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Module
aly_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
9318724
Enzymes [BR:
aly01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
9318724
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
Thi4
NAD_binding_9
FAD_oxidored
Pyr_redox_3
Pyr_redox
HI0933_like
NAD_binding_8
Trp_halogenase
GIDA
FAD_binding_3
FAD_binding_2
XdhC_C
Motif
Other DBs
NCBI-GeneID:
9318724
NCBI-ProteinID:
XP_002884784
UniProt:
D7L8W7
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MDTLLKTPNKLDFFIPQFHGFERLSSNNPNPARVRLGLKKRAIKIGSSVASGSAALLDLV
PETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP
NNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCIT
NGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAY
GIIAEVDGHPFDVDKMVFMDWRDRHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSL
VARPGLRMDDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMV
HPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQREFFC
FGMDILLKLNLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLFFGLSLFSHASNTSRLE
IMTKGTVPLAKMINNLVQDRD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatactctgttgaaaacacccaacaagctcgattttttcatccctcagtttcatggg
tttgagagattaagcagtaataatccaaaccctgcaagggttaggcttggtctgaagaaa
agggctatcaaaattggctctagtgttgccagtggtagtgctgctcttttggatcttgtt
cctgaaactaagaaggagaatcttgacttcgagcttcctttgtacgacacttccaagagt
caagttgttgatttggctattgttggtggtggtcctgctggtttagctgtggctcagcag
gtttctgaggctggactctctgtttgttccattgatccttctccaaagctcatatggcct
aacaactatggagtttgggttgatgagtttgaggctatggatttactagattgcttagac
accacatggtctggtgctgttgtctatgtcgatgaaggtgtcaagaaggatttaagccgg
ccttatgggagagttaaccggaaacagctcaaatccaaaatgcttcagaaatgtattacc
aacggtgttaagtttcatcagtctaaggtcactaacgtggttcacgaggaggcaaactcc
actgtggtttgcagcgacggtgtgaagattcaggcttcggtggttcttgatgccaccggg
ttttcccgatgcttggttcagtatgacaaaccgtacaaccctgggtaccaagtagcttac
gggattatagctgaagtcgatggtcaccctttcgatgtagacaaaatggtgttcatggat
tggagagacagacatctggactcatatcctgagcttaaagaacggaacagcaagatccca
acattcttgtacgcgatgccgttttcttccaaccgaatatttcttgaagaaacttcttta
gttgctagacctggtctgcgtatggacgatatccaagaaagaatggctgctagactgaaa
catttggggatcaatgtgaagaggattgaggaagacgagcgttgtgtgatcccaatgggc
ggtcctttaccagtcttacctcaacgagttgtcgggattggtgggacagcgggaatggtt
catccctcaactggttacatggtagctaggactcttgcagctgcgccaatagttgcaaac
gccattgtgagatacctcggttcaccgagtagtaacagcctaagaggagatcaactctct
gctgaggtatggagagacttgtggcctattgaacggcgcagacagagggaattcttctgt
tttggaatggatattctgctgaaactcaacttagacgctactagaaggttctttgatgca
ttctttgatctgcaacctcattactggcacggattcttgtcttccaggctgtttctcccg
gaactgttgttctttgggttgtcgctcttctcgcatgcttctaatacctcaagattggag
atcatgacaaaggggactgttcctcttgctaagatgatcaacaatttggtacaagataga
gactaa
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