KEGG   Arabidopsis lyrata (lyrate rockcress): 9318966
Entry
9318966           CDS       T01578                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    9318966
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aly01009]
    9318966
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9318966
Enzymes [BR:aly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     9318966
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     9318966
Protein phosphatases and associated proteins [BR:aly01009]
 HAD phosphatases
  Other HAD phosphatases
   9318966
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     9318966
SSDB
Motif
Pfam: zf-PARP PNK3P CDH1_2_SANT_HL1 CBM9_2 Hydrolase_6
Other DBs
NCBI-GeneID: 9318966
NCBI-ProteinID: XP_020888797
LinkDB
Position
Unknown
AA seq 692 aa
MITVVPFVSLRFLFPLLINRSTLFFREQPQYLLYNHSYILRTTMPVVAEYAKSNRSSCKS
CSKKIAVKSLRLGLISKGPGGVDMTRWHHFDCFPTDSESIASVDDIQGLSVLEKEDQDAL
TKLVEQGGQEPAKKLKQRDEKKEKVKKPLVGPKRFNEATTSKVIADYAKSSRSSCKRCSQ
TIVSKDLRVGLVTRDARGFDVTSWHHLGCFPIDWHPIDSVEDVGGYSSLEKGDQKELQQL
AELSGKDTLIDDVQKMDEGDDESVADNELTEETKKGKHSQVAKLVEQPGEPAKEVNEDEE
IKMPASDEISGQKIKETTGSPDSSKVISEYAKSSRSTCKKCSQTIAAKELRLGLVTRNFR
GFDMTQWHHVGCFPVDSDPISSVEDVGGFSELQSGDQDALKELVQQCGKKTLVDKMDEDN
DESEAKNKLTEETNKRKHSEVGEIVEKDESLTKANQHKAKTHKVNISESTSQVEVEAEIS
LSASDVKDKYRDANLLPKWKAFETVIFLERDDGLNDSEKIAAFDFDGCLAKTSVKIVGAD
AWSLMYPSIPEKLQSLYNQGYKLVIFTNESNIDRWKNKRQAAVDSKIGRLNSFIERVKVP
IQVFIACGVSSSGGKGSKDDFYRKPKAGMWQLMKKHFNSGIAIDMDKSFYVGDAAGRKMD
HSDADIKFAQASGLKFYTPEEYFIPASTSAGT
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgattacagtagtccccttcgtgtctcttcgtttccttttccctctccttataaatcgt
tccactctcttcttccgagaacaaccacagtatctcctctacaaccacagttacattttg
agaacaacaatgccggtcgttgctgagtacgcgaagtcgaatcgatcgtcgtgtaagtca
tgctcgaaaaagatagctgtgaaatcgcttaggttagggttgattagcaaaggacctggc
ggggttgacatgaccaggtggcaccatttcgattgttttccgactgattcggaatcgatt
gcttccgttgatgatattcaaggcttatccgttttagagaaagaagatcaggatgctttg
acgaaattggtggaacaaggtggtcaagaacctgctaaaaaattaaagcagcgtgatgag
aagaaggaaaaggttaagaagcctttagttgggccgaagaggtttaacgaggcgacaact
tcaaaagttattgctgattatgcgaaatcgagcaggtcatcatgcaagaggtgctctcag
acaatcgtttcaaaggatctgagagtggggctggtgactagagacgccaggggatttgat
gtgacaagctggcatcacttgggttgttttcccattgattggcatccgattgattctgtg
gaggacgttggtggatattcatcccttgagaaaggtgaccagaaagaattacagcaattg
gccgaactaagcgggaaggacactttgatagatgatgtccagaagatggatgaaggtgat
gatgaatctgtagctgataatgagctaacggaggagacaaaaaaaggaaaacattcccag
gttgcaaaattggtggaacaacctggcgagcctgcaaaagaagtcaatgaggatgaagag
ataaaaatgcctgcatctgatgaaataagtgggcagaagattaaggagacgacaggttct
cctgattcttcaaaagttatctctgagtatgcgaaatcgagcagatcaacttgcaagaag
tgctctcagactatcgctgcaaaggaactgaggttgggcctggtgaccagaaacttccgt
ggctttgatatgacacaatggcatcacgtgggttgttttcctgttgactctgatcccatt
agttctgtagaggacgttggtggattttcagaactgcagagtggtgatcaggatgcttta
aaggaattggtccaacaatgcgggaagaagactttggtagataagatggatgaagataat
gatgaatctgaagctaagaataagctaactgaggagacaaacaaaagaaaacattctgag
gttggggagatagtggaaaaagatgaatcgctaactaaagcaaaccaacataaggctaaa
acacataaggtgaatatcagtgagtcgacttctcaggtcgaggtcgaagcagaaatctct
ctttcagcttctgatgtgaaggataagtacagggatgccaatctattaccaaaatggaaa
gcttttgagacagttatattccttgagcgggatgatggtcttaatgattcagagaaaata
gctgcatttgattttgatggatgccttgcaaaaacatctgtgaaaatagtaggggcagat
gcatggtccctaatgtatccttccattcctgagaaactgcaaagtctgtacaatcaaggc
tataagctggtcattttcacaaatgaatccaacattgatcgatggaagaacaagcggcaa
gctgctgtagattcgaaaatcggacgtctcaacagttttatcgagcgcgtgaaggtcccc
attcaggtgtttatagcctgtggagtctcaagttctggtggtaaaggtagtaaagatgac
ttttaccgcaaacccaaggctggaatgtggcaactcatgaagaagcactttaactctgga
attgcaattgatatggataaatccttctacgttggggatgcagccggaagaaaaatggat
cacagcgacgctgacatcaaatttgcacaggcgagtgggctaaagttttataccccggag
gaatactttatccccgcaagtacatcggcagggacttag

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