KEGG   Arabidopsis lyrata (lyrate rockcress): 9323675
Entry
9323675           CDS       T01578                                 
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04145  Phagosome
aly04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    9323675
  09142 Cell motility
   04814 Motor proteins
    9323675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aly03036]
    9323675
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aly04812]
    9323675
   04147 Exosome [BR:aly04147]
    9323675
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     9323675
Cytoskeleton proteins [BR:aly04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    9323675
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   9323675
  Exosomal proteins of colorectal cancer cells
   9323675
  Exosomal proteins of bladder cancer cells
   9323675
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Misat_Tub_SegII Tubulin_2 DUF6684
Other DBs
NCBI-GeneID: 9323675
NCBI-ProteinID: XP_020890671
LinkDB
Position
Unknown
AA seq 447 aa
MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY
VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV
VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS
LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNM
MCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT
GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
AEYQQYQDATADEEGEYEDEEEEVYES
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagagagatccttcacgtccaaggcggtcaatgcggtaaccaaatcggttccaaattc
tgggaagttatctgcgacgaacacggcgttgatcccaccggacgttacaacggtgattcc
gccgatctccagctcgagcgtatcaacgtttattacaatgaagcttctggtggtagatac
gttcctcgtgctgttcttatggatctcgagcctggtactatggatagtatcagatctggt
ccctacggtcagattttccgtcctgataacttcgtctttgggcaatccggcgccggaaat
aattgggccaaaggtcattacacggaaggcgctgagcttattgatgctgttctcgatgtt
gttcgtaaagaagctgagaactgtgattgccttcaagggtttcaagtatgtcactctctt
ggaggaggcacaggttctggaatgggaactctcttgatatcaaagatccgtgaggagtat
ccagacaggatgatgctcacattctctgttttcccatctccaaaggtctcagacactgtc
gttgaaccgtataatgcaactctctcagtccaccagctcgtagagaacgctgatgaatgc
atggtccttgacaacgaagctctctacgatatctgtttccgcactctcaaacttagcact
cctagctttggagacttgaaccacttgatctctgcaaccatgagtggtgtgacttgctct
ttaaggttccctggacaactcaactctgacctaaggaaactggccgtgaaccttatccca
ttccctcgtctccatttcttcatggtgggttttgcacctctcacttcccgtggctcccaa
cagtacatttccctcacagtccccgagctgacacagcaaatgtgggacgccaaaaacatg
atgtgtgcagctgatccgcgccacggacgttacctcacagcctcagctatgttcagaggg
aaaatgagcacaaaggaagtggacgaacaaatcctgaatgtccagaacaagaactcatcc
tactttgttgaatggatcccaaacaatgtcaagtccagcgtctgcgacattccaccaact
ggaatcaaaatggcttccacatttgtcggaaactcgacttcaatccaagaaatgttcagg
agagtaagcgaacagttcacggctatgttcaggcgtaaagctttcttgcattggtacaca
ggtgaaggaatggatgagatggaattcactgaagcagagagcaacatgaatgacctggtg
gctgaataccagcaataccaagatgctaccgctgatgaagaaggcgagtacgaagatgaa
gaagaagaagtttacgaatcttga

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