Arabidopsis lyrata (lyrate rockcress): 9324753
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Entry
9324753 CDS
T01578
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00130
Ubiquinone and other terpenoid-quinone biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01240
Biosynthesis of cofactors
Module
aly_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
9324753
Enzymes [BR:
aly01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
9324753
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
9324753
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
9324753
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
9324753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MR_MLE_C
TPP_enzyme_M_2
Abhydrolase_1
TPP_enzyme_N
Abhydrolase_6
TPP_enzyme_C
Ndr
Hydrolase_4
BAAT_C
Thioesterase
Abhydrolase_3
Abhydrolase_2
MenC_N
DLH
Esterase
Mbeg1-like
Lipase
LIDHydrolase
Abhydrolase_11
Lipase_3
Motif
Other DBs
NCBI-GeneID:
9324753
NCBI-ProteinID:
XP_002887212
UniProt:
D7KWW2
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MRSSFLVSNPPFLPSLIPRHSSRNSFRRSRERFSFAESLRVSLHGIGRNIEVAHGVQFDG
PIMDRDALEVNLGDDLMVQVCVTRTLPPALTLELGLESLKEAVNELKTNPPQSSSGVLRF
QVAVPPSAKALFLFCSQPTSSDVFPVFFLSKETLEPSYKSLYVKEPHGVFGIGNALSFVH
PSSIDSKGHSMMKTFLSDESAMVTAYGFPDIEFNKYSTVNSKGGSSYFFVPQIELDEHEE
VSILAVTLAWNESLSYRFEQTISSYEKSIFQVSSHFCPNLEDHWFKHLKSSLAKFSVEEI
HPIEMEHMGFFTFSGRDQADVKELKSIQSSCQFHCKLSPDVVFSNNMLNRETEVSNFLKD
EANINAVWASAIIEECTRLGLTYFCVAPGSRSSHLAIAAANHPLTTCLACFDERSLAFHA
IGYAKGSLKPAVIITSSGTAVSNLLPAVVEASEDFLPLLLLTADRPPELQGVGANQSINQ
INHFGSFVRFFFNLPPPTDLIPVRMVLTTVDSALHWATGSACGPVHLNCPFRDPLDGSPT
NWSSNCLKGLDMWMSNAEPFTKYFQVQSHKSNGVTTGQITEVLQVIKEAKKGLLLIGAIH
TEDEIWASLLLAKDLMWPVVADVLSGVRLRKLFKPFLEKLTPVFVDHLDHALLSDSVRNL
IEFDVVIQVGSRITSKRVSQVLEKCFPFAYILVDKHPCRHDPSHLVTHRVQSNIVQFADC
VLNSQFPRRRSKLHGHLQALDGAIAREMSFQISAESSLTEPYIAHMLSKALTSESALFIG
NSMPIRDVDMYGCSSENSSHVVDMMLSAELPCQWIQVTGNRGASGIDGLLSSATGFAVGC
KKRVVCVVGDISFLHDTNGLAILKQRIARKPMTILVINNRGGGIFRLLPIAKRTEPSVLN
QYFYTSHDISIENLCLAHGVRYVHVGTKSELDDALFVPSVEEMDSIVEVESSINANAIVH
STLERFARQAAENSLGIISTSSLLHPMIGNVLLCQVSGIQYSKYRVKLCDRPTICSDEFS
QFHREGFILSLTLEDGSIGYGEVAPLDSNVENLMDVEGQLQLVLHLMNGAKFSYMLPLLN
GSISSWIWSELGITASSIFPSVRCGLEMALLNAMAVRHDSSLLGILHYQKDENGSAQPHS
AQICALLDSEGTALEVAYVARKLVEEGFSAIKLKVGRRVNSVQDALVMQEVRRAVGDQIE
LRADANCRWTFEEATEFGLLVKSCNLKYIEEPVQNKDDLIRFHEETGLPVALDETLDDFE
ECPLRMLTKYTHPGIVAVVIKPSVVGGFENAALIARWAQKHGKMAVISAAYESGLGLSAY
ILFASYLEMVNVKASTEQKQGTSPSVAHGLGTYRWLSEDVMMNTLGIFRSPYSGFVEGFV
ADASINLKDVKINNNVIVRTSKEIPVQRYELRVDVDGFSHFIRVHDVGQNAEGSVALFLH
GFLGTGEEWIPIMKGISGSARCISVDIPGHGRSRVQSHASETQTAPTFSMEMIAKALYKL
IEQITPGKVTIVGYSMGARIALYMALRFSNKIEGAVVVSGSPGLKDPVARKVRSATDDSK
ARMMVDNGLEIFLENWYNGGLWKSLRNHPHFSKIAASRLLHDDVPSVAKLLSDLSSGRQP
SLWEELEDCDTNISLVFGEKDVKFKQIATRMYREMSKSKKSVNNIIEMVEIPEAGHAVHL
ESPLRMILALRKFLTRVHKSSQRQLSQKLLLALKEM
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttcgtttctagtttcgaatcctccgtttctaccttctctaatccctcgtcac
agttctagaaactccttcagacgtagcagagaacgcttctccttcgctgagtctcttcgt
gtttctcttcatggaatcggaagaaacattgaggtcgctcatggagttcaatttgatggt
ccgattatggatagagatgctttggaggtgaatttaggtgatgatttgatggttcaagtg
tgtgtgactcgtacattgcctccagctttgactcttgagcttggccttgagagcctcaag
gaagctgttaacgaattgaagactaatcctcctcagtcatctagtggcgtcttgcgattt
caagtggctgtgcctccaagtgcaaaagctttgtttttgttttgctctcagccgacatct
tctgatgtgtttcctgtgtttttcctctccaaggaaactttggagccttcttataaatca
ctctatgtaaaggaacctcatggggtttttggaattgggaatgcactctctttcgttcat
ccgtcttcaatcgactccaagggacatagcatgatgaaaacattcctctcagatgaatca
gctatggtgacggcctatggttttccagatattgaattcaacaaatactctactgtaaat
agcaagggtggctcttcttactttttcgttcctcagattgagttagatgagcacgaggag
gtctctattttagcagttacattggcatggaatgaatctctctcttacagatttgagcaa
acaattagttcatatgagaaatcaatttttcaggtttcttctcatttctgcccaaattta
gaggatcactggttcaaacatctaaaaagctctctagctaagtttagtgtagaagagata
catccaattgaaatggagcatatgggctttttcactttttctgggagagatcaggctgac
gtcaaggaactgaaaagtatacaatcatcatgtcagttccattgcaagctttcacctgac
gttgttttctcaaacaatatgctgaatcgagagactgaagtgagcaacttcttgaaagat
gaggctaacatcaatgctgtatgggcatcagctataattgaagaatgcactcgtcttggt
ttgacgtacttttgtgtagctcctggatcaaggtcttcccatcttgcaattgctgctgcc
aaccatccccttacaacgtgtcttgcatgctttgatgaacgatctcttgcgtttcacgct
attggttatgctaaaggatccctcaaaccagcagtcattataacatcatcaggaactgcc
gtttcaaatcttcttccagcggttgttgaagccagtgaggatttcttaccactgctacta
cttaccgcagatcgtcctcctgaacttcagggagttggcgcaaatcaatcaataaatcaa
ataaaccacttcggttcgtttgtcagattcttcttcaatcttcctcctccgactgatctt
attccagtccgaatggtccttaccactgtagactctgctctacattgggcaacaggttct
gcttgtggaccagtacatctcaattgtccttttagagacccacttgacggtagtccaaca
aattggtcatccaactgcttaaaaggattagacatgtggatgtcgaatgctgaaccattc
acaaaatattttcaagtacaaagccataaaagcaatggtgtaacaactggccaaattact
gaggtcttacaagtaatcaaagaggctaagaagggtcttcttcttattggtgcaatccat
acagaggatgaaatttgggcttcgcttctgttggcgaaagatctgatgtggcctgtagtt
gcagatgtcttgtcgggtgtaaggctgcgcaagctttttaaaccttttcttgagaagttg
acgcctgtttttgttgatcatcttgatcatgccttgctttcagactctgtcaggaatttg
atagagtttgatgttgttatccaggttggaagtcggataacaagtaaaagagtttctcag
gtgctagagaaatgctttccatttgcatacattttagttgataagcatccatgccgacat
gacccatcacacctggtcactcacagggtccaaagcaacattgttcagtttgctgattgt
gtgctgaactctcaatttccaaggaggagaagcaagttgcatggtcatctacaagcattg
gatggtgctattgcacgggaaatgtcatttcaaatatctgctgaaagctccctgaccgaa
ccttacattgcacacatgctttctaaagcactaacatctgaatctgctcttttcatcggg
aatagtatgccaataagggatgtggatatgtatggatgtagttcagaaaattcttctcat
gtggtagatatgatgttgagtgcagaactaccatgtcaatggatacaagtaactggaaat
agaggagctagtggcattgatgggttgctcagctcggccactggctttgctgtaggatgc
aagaagagagtggtctgtgtggtgggggacatctctttccttcatgatacaaatggattg
gcgattttgaagcagaggattgcaaggaaaccaatgacaattcttgtgataaacaaccgt
ggaggtggaatcttccgacttcttcctattgcaaagagaacagagcctagcgtgttaaat
caatatttctatacatcacatgacatttccattgaaaacttgtgtttggcacatggtgtg
aggtatgtacacgttgggacgaaaagtgaacttgatgatgctctatttgtacccagcgtg
gaagagatggattccattgtggaggttgaaagctctataaacgctaacgcaatcgttcat
agcactttggagaggtttgcacgccaagctgcagaaaattccctgggcattatctctacc
agttctcttcttcatccgatgatcggaaatgtacttctttgccaagtctctggaatacaa
tattcgaagtacagagtcaaactgtgtgacagacctaccatatgttctgatgaattctct
caattccatcgagaaggatttatactctccctcactttggaggatggaagcattggctat
ggagaggttgcacctctggacagtaatgtagagaacttaatggatgttgaggggcagctt
cagttagttcttcacctcatgaatggagctaaatttagttacatgcttcctttgttaaat
ggctctatttcttcctggatttggagtgaacttggaattactgcatcatcgattttccct
agtgtcagatgtggtctggaaatggctcttctaaatgctatggcagtaagacatgattct
agtttgttggggatacttcattatcagaaagacgaaaatggttctgctcagccacattct
gctcaaatatgtgcccttcttgattctgaaggtaccgcattggaggtcgcatacgttgct
agaaaacttgttgaagaagggttcagtgctattaaacttaaagttggtcgtcgagtgaac
tctgttcaagatgctttagttatgcaagaagtaaggagagccgttggcgatcaaattgaa
ctccgtgcagacgcaaattgtcgttggacttttgaagaggctacagagtttggtttgttg
gtgaaaagctgtaatttaaaatatattgaggaacctgtccagaataaagatgaccttata
aggtttcatgaagaaactggattaccagtggcacttgatgagactcttgatgattttgag
gaatgtcctctacgtatgcttaccaaatatacccatcctggaatagttgctgttgttatt
aaaccaagtgttgtgggagggtttgagaatgcagccctgattgctcggtgggcacagaag
catggaaaaatggctgttattagtgctgcatacgaaagtggcctaggtttatcagcatat
attttatttgcatcatatttggagatggtaaacgtcaaagcatccacagagcagaagcaa
ggaacatccccttctgtagcccatggtcttggaacttatcggtggcttagtgaagacgta
atgatgaatacattagggatatttcgtagcccttatagtggatttgttgaaggatttgtt
gctgatgctagtataaatctaaaggatgttaagataaacaacaatgttattgttagaacc
agtaaagaaattcctgtccagaggtatgaactgagggtggatgtagatgggttctctcat
ttcattagagtccacgacgttgggcagaatgcagaaggaagtgtagctttgtttcttcat
ggatttcttggaactggtgaagaatggatccccatcatgaagggtatctcgggatctgcg
agatgcatttcagtcgatattcctggtcacggaaggtcaagggtacaaagtcatgctagt
gagacccagacggccccaactttctcaatggagatgatagcgaaggcattgtataagttg
attgagcaaattactcctgggaaagtaactatagttggatattccatgggagcaagaata
gcactgtacatggctttgaggtttagcaacaagatcgaaggagctgtcgtggtatcaggg
agcccgggactcaaggatccagttgcaaggaaagttcgaagtgctacagatgattccaaa
gcacgaatgatggttgacaatggactagaaatctttctagagaactggtacaatggaggc
ttgtggaagagcttgagaaatcatccccattttagtaaaatagctgcaagccgcttgcta
catgacgatgttcctagtgttgcaaagctcctgtctgatctaagcagtgggagacaaccg
tcattgtgggaagagttggaggattgtgatacaaatatctcgctcgtattcggagagaaa
gatgtcaaattcaagcaaatcgctactagaatgtaccgcgagatgagtaaaagcaagaag
agcgtaaacaatatcatcgagatggttgaaatcccagaggctggtcacgctgtccatctc
gagagccctcttcgcatgattctcgcccttagaaaattcttaacaagagtgcacaaaagt
tcacagagacagctttctcagaagctcttgttagcactaaaagaaatgtaa
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integrated database retrieval system
