Arabidopsis lyrata (lyrate rockcress): 9328804
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Entry
9328804 CDS
T01578
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9328804
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9328804
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9328804
03036 Chromosome and associated proteins [BR:
aly03036
]
9328804
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
9328804
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
9328804
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
9328804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EZ
PDS5
SCD
Adaptin_N
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
9328804
NCBI-ProteinID:
XP_002892742
UniProt:
D7KQE7
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSIIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEYAHVLLPPLETLSTVEETCVREKAVDSLCRIGAQMREN
DLVEHFTPLAKRLSAGEWFTARVSACGIFHIAYPSAPDLLKTELRSIYGQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVTFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYARLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQS
LIPIVDQAVVENMIRPCLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgatgagcctttatacccgattgccgtgcttatcgacgagctaaaaaac
gatgatattcagctaagattgaactctattagacggctttctatcattgctcgtgctctt
ggagaggagaggacaaggaaagagttgattccgtttcttagtgagaacaatgacgatgat
gatgaagtgcttttggcgatggcggaagagttgggggtttttattccgtatgtaggaggg
gttgagtatgcacatgttttgcttccacctttggagactctctcgaccgttgaggaaact
tgcgtgagggaaaaagctgtagattcgctttgcagaattggtgctcagatgagggagaat
gatttggttgagcatttcactcctctggctaagcgactttcagctggtgaatggttcaca
gccagagtatcagcatgtgggattttccatattgcatacccaagtgccccagatctgcta
aagacggagctaagatcaatatatggtcagctttgtcaagatgacatgccaatggtgcgc
agagctgcagcaaccaatttggggaagtttgctgctaccattgaatcagctcatttgaag
acagacattatgtccatgtttgaggatcttacgcaagatgatcaagattcggttagatta
ttggctgttgagggttgtgctgctcttgggaaattattggagccccaggactgtgtcgca
cacattcttcctgtgattgtgactttctcgcaggataagtcctggcgtgtgcgttatatg
gttgcaaatcagctctatgaactttgtgaagctgtaggaccggagccaactaggacggat
ctggtgcctgcatatgctcgtctacttcgtgataatgaggctgaagttcggatagcagct
gctggaaaagttaccaagttttgtcgcattttaaaccctgaactcgctatccagcacatt
cttccctgtgtaaaggaattatcatcagactcttctcagcacgtcagatctgcattggca
tcagttataatgggaatggctccagtcttgggtaaggatgcgacaattgagcatcttctt
ccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacattatcagc
aaacttgaccaagtgaaccaggttattgggattgatctgctatcacaatcattactacca
gccattgtagaacttgctgaagacaggcactggagagtacgtctggctataatagagtat
attcccttgttggccagtcaattaggtgtaggcttctttgatgataagcttggtgctctt
tgcatgcaatggttacaagacaaggttcactcaatccgtgaagctgctgcaaacaatctt
aagcgtcttgctgaagagtttggtcctgaatgggcaatgcagcatatagttcctcaggtt
ctagagatgattaacaacccacactatctatatcggatgacgattcttcgtgcagtatcg
cttctcgctccagtaatgggatccgagatcacatgttccaaactcttgcctgcggtgata
actgcatctaaagacagagttccaaacatcaaatttaacgtcgccaaaatgatgcaatct
ctcattccgatagtcgaccaagcggttgtggagaacatgatacggccatgcttggtggag
ctaagtgaagacccggacgttgatgttcggtttttcgcaaatcaagctctccaatctatt
gacaatgtgatgatgtctagctaa
DBGET
integrated database retrieval system
