Arabidopsis lyrata (lyrate rockcress): 9330319
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Entry
9330319 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9330319 isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00240
Pyrimidine metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
9330319
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
9330319
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Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
DUF6750
Glyco_hydro_127
Motif
Other DBs
NCBI-GeneID:
9330319
NCBI-ProteinID:
XP_002891579
UniProt:
D7KGP6
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MASSSAHSRISNLQNHLSPLEANNKLRSLVKISPQVSEALSNGRAVVALESTIISHGMPY
PQNLQTAKEVESIVRENGAVPATIAILNGVPCIGLSEEELERLASLGKSVQKTAGRDIAH
VVATRGNGATTVSATLFFASMVGIQVFVTGGIGGVHRHANHTMDISSDLTALGRTPIAVI
SAGVKSILDIPKTLEYLETQEVYVAAYKSDEFPAFFTEKSGCKAPSRVNSPEDCARVIDA
NMKLNRQAGILFAVPIPKQHSAAGNLIESATQRALTEAREKNVTGNAETPFLLSRVNELT
GGTSLAANIALVKNNALIGSQIAVALSQLM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttctgctcattctagaatctcgaatctccagaatcatctttcacctctt
gaagcaaacaacaagctcaggagtctggtcaagatatctccacaggtatctgaagcctta
tccaatggacgcgctgtggtcgctcttgagtcaaccattatctcccatgggatgccttac
ccccaaaatctgcaaacagcaaaagaggtggagtcgattgtcagagaaaatggagctgtc
cctgcaactatagctatcctgaatggagtaccttgcataggtctgagcgaggaagaacta
gaacgtcttgcatctctggggaaaagtgttcaaaagacagcaggcagggacatagcacat
gttgtggctacaagaggaaacggtgcaactacagtctctgcaacgttgtttttcgcttca
atggttggcatccaagtttttgtgacgggtgggataggaggtgtccatagacatgccaac
catacgatggacatatcatctgatcttactgcacttggaaggactcccatagcagtgata
tcagcaggcgttaaatcaatacttgatattccaaagactcttgaatatttggaaactcaa
gaagtgtatgttgctgcatacaagagcgatgagtttccagcatttttcacagagaaaagc
ggctgtaaggcaccttcccgtgtaaatagccctgaagactgtgctagagtaatagatgca
aacatgaagctaaaccgtcaggcggggattttatttgctgttccaattccgaaacagcat
tcagctgccggaaatcttatcgaatcagcaacacagcgtgctcttacagaagcaagggaa
aaaaacgttactggaaatgcagaaactccattcttactttcacgggtaaatgagttaact
ggaggcacgtcacttgcagcaaacattgcgcttgtgaaaaacaatgctcttatcggttct
cagattgcagtagccctttctcagctgatgtga
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