Arabidopsis lyrata (lyrate rockcress): 9330339
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Entry
9330339 CDS
T01578
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03030
DNA replication
aly03410
Base excision repair
aly03420
Nucleotide excision repair
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9330339
03410 Base excision repair
9330339
03420 Nucleotide excision repair
9330339
03440 Homologous recombination
9330339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9330339
03400 DNA repair and recombination proteins [BR:
aly03400
]
9330339
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
9330339
DNA replication proteins [BR:
aly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
9330339
DNA repair and recombination proteins [BR:
aly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
9330339
NER (nucleotide excision repair)
GGR (global genome repair) factors
9330339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
AROS
Motif
Other DBs
NCBI-GeneID:
9330339
NCBI-ProteinID:
XP_020868237
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MAMGVSLTSHNNPLLRHLSPSSSWVSRSSSRFSSSPLPSFLFPCRRTLLQRKLSSTEGNV
GYSTTTVCQGFQHPGHQRSSSVVLNGEWELRSESNKVRMVPKIIKVGNQTEVAETHQVPG
TVSAWREEANKLRERNGQIARNLDDSGYFNGSVPIISSAPSYETSQKIDYEFKPRGNTTA
TLNKELIGVTQSEPVVSLPSKSLDVGDNMDVNPSGEGKRRPLISGKSSGTANSNRNTVAI
SKVEKSTEPSNVRENLRKIYDKVLVVDNVQAAKDTVAKLVNQYRNHVHSCDTEVSGIEVK
EETPVDHGELICFSIYCGPEADFGYGKSCIWVDVLGENGREVLAEFKPYFEDSFIRKVWH
NYSFDSHIIRNHGIEISGFHADTMHMARLWDSARRIEGGYSLEALTSDPKVLGGTQTKEE
ADFLGKISMKTIFGKRKLKKDGSEGKMVVIPPVEELQREDREAWISYSALDAISTLKLYE
SMTKKLQMMDWRLDGKPVLERTMLDFYHEFWRPFGELLVKMEAEGILVDREYLAEIEKVA
KAEQQVAGSRFRNWASKYCPDAKYMNIGSDTQLRQLFFGGISNSVNGEVLPVEKLFKIPN
IDKVIEVGKKTATKFRNIKLHRISDSPLSTENLTASGWPSISGDVLKELAGKVSAEYDFM
EDVSDISLEEVAEDNDADQTSKTQKSKTDVQTDTSAYGIAYVAFGGGERGKEACHAIASL
CEVCSIDALISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRY
KIRKAFVASPGNTLVVADYGQLELRILAHLTGCKSMMEAFKAGGDFHSRTAMNMYPHIRE
AVENGQVILEWHPQPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTAIGLSRDWKVSV
EEAQDTVKLWYNDRQEVRKWQERRKKEAIEDGYVRTLLGRSRRFPRYKSRAQKNHIQRAA
INTPVQGSAADVAMCAMLEISTNQQLKKLGWRLLLQIHDEVILEGPIESAEIAKDIVVDC
MSKPFNGRNILSVDLSVDAKCAQNWYAAK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccatgggggtttctcttacttcccacaataaccctcttcttcgccacttatctcct
tcctcttcttgggtttctcgttcctcctctcgcttctcttcttctccactcccttccttc
ctctttccttgccgtagaacccttcttcaaaggaaattatcttccacagagggaaatgtc
ggttattcgactactacagtttgtcagggatttcagcatccgggtcatcaacggtcatct
tctgttgtgcttaacggagagtgggaacttcgatccgaatccaacaaggtaaggatggtt
cctaagataatcaaggtgggaaatcagacggaagttgctgaaactcatcaagttcctgga
actgtaagtgcttggagggaagaagcaaataagcttagagaaagaaatggtcagattgct
agaaacctcgatgacagtggttatttcaatggctctgtcccaattatatctagtgctccg
tcttatgaaacctctcagaagattgattatgagttcaaacccagaggtaacactactgct
acactcaataaggaattgattggcgttacccaatctgaacctgttgtgtcattgccaagc
aagagtttagatgttggggataatatggatgtaaatcctagtggagagggaaaacggaga
cctcttataagcgggaagtcttctggcaccgcaaacagcaacaggaatacagttgccatt
tccaaagtggagaaaagcactgaaccttccaatgtccgtgaaaaccttaggaaaatatat
gacaaggttctcgttgttgataatgtgcaagctgcgaaagataccgtggctaagctcgtg
aatcagtataggaatcatgtccattcttgtgatacagaggtgtccgggattgaggtgaag
gaagaaacgcctgtcgaccacggtgaattaatatgtttcagtatttactgtgggccagaa
gcagattttgggtatggaaaatcgtgcatctgggttgatgttcttggtgaaaatggcagg
gaggtgttggccgagtttaaaccgtattttgaagactcgttcatcagaaaagtctggcac
aactacagtttcgatagccacatcattaggaaccatggaattgagatttctggttttcat
gccgacactatgcacatggcacgattatgggattctgcacgacggatagagggtggttat
tcgcttgaagcgcttacaagtgacccaaaagttcttgggggcacacagacgaaggaggaa
gctgatttccttggtaaaatttcgatgaagactatttttggcaaacggaaactgaaaaaa
gatggatctgaagggaaaatggttgtcattccccctgtcgaagagcttcagcgagaagat
cgagaggcttggatttcatattctgccttggatgcgataagcacactaaagctttacgag
agcatgacaaagaaactgcaaatgatggattggcgtcttgatggaaagccagttttagaa
aggacaatgttggatttttaccatgagttctggcgaccctttggtgaacttcttgtaaaa
atggaagcagaagggatacttgtagatagagagtatcttgctgagatagagaaagtagcc
aaagccgaacaacaagttgctggtagtaggtttcgtaattgggcatctaagtattgcccc
gatgcaaagtatatgaatattggcagtgacacacaattgcgtcagctcttttttggtggc
atttccaacagtgtgaatggcgaggtgcttccagttgaaaagctcttcaaaattcccaat
attgataaggttattgaagtaggcaaaaaaacagcgacgaagtttcgaaacatcaaactg
cataggataagtgacagcccactgtcaactgaaaatttaactgccagtggttggccctct
ataagtggggatgttttgaaagagttagctgggaaagtttccgctgaatacgactttatg
gaagatgtttcagatatttctctggaagaagttgctgaggataatgatgcagatcaaact
tcaaaaacacaaaagtccaagacagatgttcaaaccgacacatccgcttatggaatagca
tatgttgccttcggagggggtgaaaggggaaaggaggcatgtcatgctattgcgtcatta
tgtgaagtttgctcaatagatgctttaatctcaaatttcattcttcccttacagggaagt
aatgtatcaggcaaagatggtcgcgtccattgctccctgaatatcaatacagaaactggg
cgcttatcagctagaaggccaaatttgcagaaccaacctgctttggagaaggatcggtac
aagattcgtaaggcctttgtagcatcacctggaaatacactcgttgtggctgattatggg
cagttggaacttagaattctggcacatcttactggttgtaaaagcatgatggaagctttt
aaagcaggcggagatttccactcaaggacagccatgaatatgtatccacatattcgtgaa
gctgtagaaaatgggcaagtgatccttgaatggcatccacaacctggggaagacaagcca
cccgtgccgttgttaaaggatgcctttggctcagagagaagaaaagccaagatgcttaac
ttttcaattgcgtatgggaaaaccgcgatcgggctttctagagattggaaggtctcagtt
gaagaggctcaggacacagtcaaactctggtacaatgacaggcaagaagtaaggaaatgg
caagaaaggcgtaagaaagaagctatagaagatgggtatgtacgcactttactaggaagg
tctcgtagatttccgaggtataagtcacgtgcgcagaagaatcatatccaaagagcagca
atcaacactccagtccagggaagtgcagctgatgttgccatgtgtgcaatgttggaaata
tcgacaaatcaacagttgaagaagcttggttggagattgcttctacagattcatgatgaa
gtaatcttggaagggccaattgaatcagcggagatcgccaaggacatagttgtggactgt
atgtctaaaccctttaacggaaggaatattctctctgtcgatttatctgttgatgcaaaa
tgtgctcagaactggtatgctgccaaatag
DBGET
integrated database retrieval system
