Alteromonas mediterranea DE: MADE_1009430
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Entry
MADE_1009430 CDS
T00747
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amc03009
]
MADE_1009430 (rimO)
Enzymes [BR:
amc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MADE_1009430 (rimO)
Ribosome biogenesis [BR:
amc03009
]
Prokaryotic type
ribosomal protein modification factors
MADE_1009430 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AEA98024
UniProt:
B4RYE6
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All DBs
Position
complement(2128454..2129911)
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AA seq
485 aa
AA seq
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MTVETFDPNKVANKTTTLETPVKVLSDNQSSQQGVGSRIGFVSLGCPKNLVDSERILTQL
RTEGYDVVPTYNDADLVIVNTCGFIDAAVEESLDTIGEALKENGKVIVTGCLGVKEDEIR
ELHPNVLAITGPHAYETVVEQVHEHLPKPQHNPFADLIPDHGVKLTPRHYAYLKISEGCN
HRCTFCIIPSMRGDLVSRPVGNVLDEAKRLKEAGVKELLVISQDTSAYGVDVKHRTGFWN
GMPVKTHMQQLCEQLGEMGIWVRLHYVYPYPHVDDLIPLMNDGKILPYLDIPFQHANKRI
LRLMKRPGSAERVLERVKKWREQCPSLVIRSTFIVGFPGETEEEFEELLDFLREAQLDRV
GAFAYSPVEGARANDLPDPVPEDIKQERLARFMEVQGEISAARLKARIGNEYQVVIDSVD
AEGAVGRTYADAPEVDGLVHLNGVYDVKPGDRVWAEVIHANEHDVWAVLSEDQDDEEAHA
TEGAE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaaacgtttgatccaaacaaagtcgcaaacaaaaccacaacgcttgaaaca
ccggtcaaagtactgagtgacaatcaatcttcacaacaaggtgtaggtagcagaattggt
tttgtcagcttagggtgccctaagaatttggttgattctgaacgtattcttactcaactt
cgcaccgaaggttatgacgtagtgcctacctacaacgatgctgatctcgttatcgtcaac
acttgtgggttcattgacgccgcagttgaagaatcgttagataccattggtgaagcatta
aaagaaaatggcaaagttattgtaacgggttgcttaggggtaaaagaagacgaaattcga
gagctacacccaaatgtcttggctattaccggccctcatgcatacgagacggtagtagag
caagtacacgagcatttaccgaagcctcagcataatccgtttgcggatcttattcctgat
cacggtgtgaaactaacgccccgccattacgcatatttaaaaatttcagaaggctgcaac
caccgctgcacattctgcattatcccctcaatgcgcggagatttagtaagccgccctgtt
ggcaacgtgcttgatgaagccaaacgattaaaagaggcgggcgtgaaagagctattggtt
atctctcaagataccagtgcgtacggtgtagatgtaaaacacagaacagggttctggaac
ggcatgccggtgaagacccacatgcaacagctttgcgagcaactgggtgaaatgggaatt
tgggtacgcctccactacgtttacccttacccccatgttgatgacctcattccactgatg
aatgatggtaaaattctgccttatcttgatattccattccagcacgccaataagcgcatt
cttagacttatgaagcgcccaggtagtgcagaaagagtactagagcgcgttaaaaaatgg
cgtgaacaatgcccgtcattggtaattcgctctacgtttatcgttggatttccaggagaa
acagaagaagagtttgaagaacttttagactttctacgggaagcccagcttgatcgcgtt
ggtgcattcgcttattcaccggttgaaggggcaagagcaaatgacctacccgacccagta
ccagaagatataaaacaagaacgccttgcgcgcttcatggaagtacagggtgaaataagc
gctgcgcgattaaaagccagaattggtaatgagtatcaagtggttattgatagcgttgac
gccgaaggtgcggtaggtcgaacgtatgccgatgcacctgaagtggacggcctcgttcat
ttaaacggggtttacgatgtaaaaccaggcgatcgtgtatgggctgaagtcattcacgct
aacgaacacgatgtatgggctgtactatctgaagaccaagacgatgaagaagcgcatgca
acggagggcgcagagtag
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