Amycolatopsis mediterranei U32: AMED_0321
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Entry
AMED_0321 CDS
T01269
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00362
Benzoate degradation
amd01100
Metabolic pathways
amd01120
Microbial metabolism in diverse environments
amd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMED_0321 (pcaB)
Enzymes [BR:
amd01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
AMED_0321 (pcaB)
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Motif
Pfam:
Lyase_1
ADSL_C
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
ADJ42144
UniProt:
A0A0H3CW34
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All DBs
Position
complement(331916..333586)
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AA seq
556 aa
AA seq
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MSVPDPIVMPSPRSAACDADAMTVDPDSGLLSPVRAGTPAEASTGDEAWVRAMLDAEAAL
ARAQARLGTVPPEAADAITEAAGQARIDVAELARGSRATANPVVGLVKALTAAVGELAPA
AAEYVHRGSTSQDIFDTAMMLVADRTLRPLAADLDATAEALAGLARAHRDTTMAGRTLTA
HAVPTTFGLKAAGWRQLVLDAAVRIRRVLDGGLPVSLGGAAGTLAAYVEYARLADEPSGG
GGGGGGGGGGSTPATVPVPGASMPTAIPDTSTPTAIPRASTPTAVPGASTPASVPGAPEA
ARDADVGGYVNRLTAAFAEETGLAAPVLPWHSLRTPVADLAGALAFTAGALGKLAVDVET
LSRTELGEVAEPAADGRGGSSAMPHKRNPVLATLIRSAALQVPVLAAGVTQSMLAEDERS
AGVWHAEWQLIRECLRLTGGAAHTAAELARGLTAAPGRMRANLASTHGLIVSERLSAVLA
PLLGKAKAKELLGEASRRAVREDRPLRDVLDELPAITGVLTAAALDELLDPAGYTGAAGA
LVDRALGDGPQPGGSD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgccagacccgatcgtgatgccgtcgccgaggtcggccgcgtgcgatgctgac
gccatgaccgtcgaccccgattccggactcctgtccccggtgcgggccggtacgccggcc
gaagcgtcgaccggagacgaggcctgggtgcgcgcgatgctcgacgccgaggcggcactc
gcgagggcgcaggcgcggctcgggacggtaccgccggaggccgccgacgcgatcacggag
gccgcgggccaggcgcggatcgacgtcgccgagctggcgcgggggtcgcgggcgaccgcg
aacccggtcgtcggcctggtgaaggcgctgacggcggcggtcggcgagctcgcgcccgct
gcggcggagtacgtgcaccgcggctcgaccagccaggacatcttcgacaccgcgatgatg
ctggtcgccgaccggacgctgcggccgctcgccgccgacctcgacgccacggccgaggcg
ctggccgggctggcccgcgcgcaccgggacacgaccatggccgggcggacgctgacggcc
cacgcggtgccgacgacgttcgggctcaaggccgcgggctggcggcagctggtgctggac
gcggctgtccgcatccgccgcgtgctcgacggcggcctgccggtctccctgggcggagcg
gccggaacgctggcggcgtacgtcgagtacgcgcgcctcgccgacgagccgagcgggggc
gggggcgggggcgggggcgggggcgggggcagcacaccagccacggtcccggtccccggc
gcgagcatgcccaccgcgatccccgacacgagcacacccaccgcgatcccccgcgcgagc
acgcccaccgcagtccccggcgcgagcacacccgcctcggtccccggcgcgccggaggct
gctcgcgatgcggacgtcggcggctacgtgaaccggctgaccgccgcgttcgccgaggag
accgggctggccgctccggtgcttccgtggcactcgctgcggacgccggtcgccgacctc
gccggtgcgctcgcgttcaccgccggggcgctggggaagctggccgtcgacgtcgagacg
ctcagccggaccgagctgggcgaggtcgccgaaccggctgccgatgggcggggcggctcc
tcggcgatgccgcacaagcggaacccggtgctcgcgacgctgatccggtcggccgcgctg
caggtgcccgtgctggccgcgggggtcacgcagtcgatgctcgccgaggacgaacggtcg
gccggggtctggcacgccgagtggcagctgatccgcgagtgcctgcggctgaccggcggt
gccgcgcacaccgccgccgagctggcgcgcgggctcaccgcggcgcccgggcggatgcgg
gcgaacctggcgtcgacgcacgggctgatcgtctccgaacggctctccgccgtgctcgcg
ccgctgctcggcaaggcgaaggccaaggagctgctcggcgaggcctcccggcgggcggtg
cgtgaagaccggccgctccgggacgtgctggacgagctgcccgccatcaccggcgtgctg
accgcggccgcgctggacgagctgctggaccccgccggctacaccggtgcggcgggcgcc
ctggtcgaccgtgccctcggcgacgggccgcagccgggcggttcggactag
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