Amycolatopsis mediterranei U32: AMED_3130
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Entry
AMED_3130 CDS
T01269
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00052
Galactose metabolism
amd00511
Other glycan degradation
amd00600
Sphingolipid metabolism
amd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
AMED_3130 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
AMED_3130 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AMED_3130 (lacZ)
Enzymes [BR:
amd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
AMED_3130 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro2_C5
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N
BetaGal_ABD2
F5_F8_type_C
Mannosidase_ig
Cellulase
Motif
Other DBs
NCBI-ProteinID:
ADJ44921
UniProt:
A0A0H3D3X3
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All DBs
Position
3371722..3374760
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AA seq
1012 aa
AA seq
DB search
MVLGGVGAAVAASAVTPVARAADALTPPGQARESDFTAGWRFALANPDGVTDPGGRFADA
PKPGFDDSAWQVVDVPHDWSIELPPTGKGTSSGSGFFRGGLGWYRKMFTLPPSPAGKRVS
VEFDGVYSDAHVYLNGELLGHHPYAYTGFAFDLTGRLHTDGRTPNVLAVRATNPLPSSRW
YSGSGIFRRVRLVVTDPVHVARHGTFVTTPDIAAGRGTVRVATDVVNDSGAAVTAQVRTT
VTDPAGRVVATGSTDVAVPAGRTVTAVTGTRVERPLLWSFETPRLYRLRTDVVVAGRVLD
TTTADFGFRYTEFHPDHGFSLNGKPAKLRGVNLHASQGALGAVIDPAALEHQMRLMLAMG
VNALRTAHNPPDPQLVTVCERLGIVMMVEAFDCWRTGKLEYDYHRDFDEWSGRDIAEMVH
AAKNSPAVVLWSIGNEVPDASMAGGPEIAAGLIAAVRAIDPTRPIVMGSDRYRGVPAPGS
PQDLILKQLDGLGVNYNTAQSIDGLHKQYPDKFFFESESSSATSTRGVYQEPELLNTGEN
HTPGKRATSSYDNNLASWTFSGEYSLKKDRDRKFCQGQFLWSGQDYLGEPTPYDVFPVKT
SFFGAIDSAGLPKDAFHLFRSQWTTAPMVHLTPMDWTNHRPGEPVAVRVYSTVDTVELLL
NGKSLGVRKFDRKTTVDGRGYLETTEPAGDDKNDPSGSYTSPNGSAGKLHLTWTVPFEPG
TLTAVARAGGREVARDELVTAGPPRAVELSVDAPGGEVVTGAMTFVTASVVDAHGVVVPG
DGPVLRFTVAGPGRVAGVDNGRQELAQGYQQPAIPAFKGLAVAVVAATGGRGPITVTASA
PGLAPGKLTLPGSSLGQRHGPGARAVETPVVPPASTADASYSGAPDALPSAMLDGNPATG
WSNYYVKPATATLNAVSRPRAADWVSLAWPSAQRISAVTANFVVDAKLALPVAVEVACRT
ARGFEPVRNLRITWGTGSNDPTSFAFDPVVTTEVRVTMTAHGFLRISALLAR
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
gtggtgctgggcggggtcggcgccgctgtcgccgcgtcggccgtcacgccggtcgcccgg
gccgccgacgcgctcacgccgccgggccaggcgcgagaaagcgatttcacggccggctgg
cggttcgccctggccaaccccgacggcgtcaccgatcccggcggtcgcttcgccgacgcc
ccgaagcccggcttcgacgactcggcgtggcaggtggtcgacgtcccgcacgactggagc
atcgaactcccgccgaccggcaagggcaccagcagcgggtccggcttcttccgcggcggg
ctcggctggtaccgcaagatgttcacgctgccgccctcgccggcgggcaagcgcgtgtcg
gtggagttcgacggcgtctattcggacgcccacgtctacctgaacggcgagttgctcggc
caccacccgtacgcctacaccgggttcgccttcgacctcaccggacggctgcacaccgac
ggccggacgccgaacgtcctcgccgtgcgcgcgacgaacccgctgcccagcagccgctgg
tactccggcagcgggatcttccgccgcgtccgcctggtcgtcaccgacccggtgcacgtc
gcccggcacggcacgttcgtcaccacgcccgacatcgccgccggccgcggcacggtgcgg
gtcgccaccgacgtcgtcaacgactccggcgccgcggtcaccgcgcaggtgcgcacgacc
gtcaccgacccggcgggtcgcgtggtggcgaccggctcgacggacgtcgcggtaccggcc
gggcggacggtgacggcggtgaccggaacccgggtcgagcgtcccctgctgtggtcgttc
gagaccccccggctctaccggctgcgcaccgacgtcgtcgtggccgggcgcgtgctcgac
acgaccaccgcggacttcggcttccgctacaccgaattccacccggaccacggattttcg
ctcaacgggaagccggcgaagctgcgcggggtcaacctgcacgcgagccagggtgcgctg
ggcgcggtgatcgacccggctgcgctggagcaccagatgcggctgatgctcgcgatgggc
gtcaacgcgctgcggaccgcgcacaacccgccggacccgcagctggtgacggtctgcgaa
cggctcgggatcgtgatgatggtcgaggcgttcgactgctggcggaccggcaagctcgaa
tacgactaccaccgcgacttcgacgagtggagcgggcgcgacatcgccgaaatggtgcac
gcggccaagaactcgcccgcggtcgtgctctggtcgatcggcaacgaggtgcccgacgcg
tcgatggcgggcggcccggagatcgccgcgggcctgatcgccgcggtccgcgcgatcgac
ccgacccggccgatcgtgatgggttcggaccgctaccgcggtgtgcccgcgccgggctcg
ccgcaggacctcatcctcaagcagctcgacggcctcggcgtcaactacaacaccgcccag
tcgatcgacgggctgcacaagcagtacccggacaagttcttcttcgagtccgagtcgtcg
tcggcgacctcgacgcgcggcgtctaccaggaaccggagctgctcaacaccggcgaaaac
cacacgccgggcaagcgggcgacgtcgtcctacgacaacaacctggcctcgtggaccttc
agcggcgagtactcgctgaagaaggaccgggaccgcaagttctgccagggccagttcctg
tggtccgggcaggactacctcggcgagccgacgccgtacgacgtcttccccgtcaagacg
tccttcttcggcgcgatcgacagcgccggcctgcccaaggacgccttccacctgttccgc
agccagtggaccaccgccccgatggtgcacctgaccccgatggactggacgaaccaccgg
ccgggcgagccagtcgcggtgcgggtctattccactgtggacacggtcgagctgctcctg
aacgggaagtcgttgggcgtgaggaagttcgaccgcaagaccactgtggacggccggggc
tacctggagacgaccgagccggccggcgacgacaagaacgatccctccggcagctacacc
agcccgaacggcagcgccggcaagctgcacctgacctggaccgtgcccttcgagcccggc
acgctgaccgcggtcgcccgggccggcggccgcgaggtggcgcgcgacgaactggtcacg
gccgggccgccgcgcgcggtcgagctgagcgtggacgcgcccggtggcgaggtggtgacc
ggggcgatgacgttcgtgacggcgtcggtcgtggacgcccacggggtcgtcgtgcccggc
gacgggccggtgctgcggttcaccgtcgccgggcccggccgggtcgccggtgtcgacaac
gggcggcaggaactcgcccagggctaccagcagccggcgatcccggcgttcaaggggctg
gccgtcgccgtcgtcgcggcgaccggcgggcgcggcccgatcaccgtgacggcgagtgct
ccggggctggcgccggggaagctcaccctgcccggctcgtccctcggacagcgccacggc
ccgggagcgcgcgcggtcgagaccccggtggtcccgcccgcttcgacggcggacgcgagc
tactcgggcgccccggacgcgctgccgtcggcgatgctggacgggaatccggccaccggc
tggtcgaactactacgtcaaaccggcgacggcgacgctgaacgcggtgagcaggccgcga
gccgcggactgggtgtccctggcctggccgtcagcgcagcggatcagtgccgtcacggcg
aacttcgtcgtggacgcgaagctggcgctgccggtcgccgtcgaagtcgcctgccgcacc
gcccggggcttcgagccggtgcggaacctgcggatcacgtgggggaccggctcgaacgac
ccgacgtcgttcgcattcgatccggtcgtcaccacggaggtgcgggtgacgatgaccgcg
cacggcttcctgcggatcagcgcgctgctggcccgctga
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