Amycolatopsis mediterranei U32: AMED_5071
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Entry
AMED_5071 CDS
T01269
Name
(GenBank) mandelate racemase/muconate lactonizing enzyme
KO
K01856
muconate cycloisomerase [EC:
5.5.1.1
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00361
Chlorocyclohexane and chlorobenzene degradation
amd00362
Benzoate degradation
amd00364
Fluorobenzoate degradation
amd00623
Toluene degradation
amd01100
Metabolic pathways
amd01120
Microbial metabolism in diverse environments
amd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMED_5071
00364 Fluorobenzoate degradation
AMED_5071
00361 Chlorocyclohexane and chlorobenzene degradation
AMED_5071
00623 Toluene degradation
AMED_5071
Enzymes [BR:
amd01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.1 muconate cycloisomerase
AMED_5071
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
MenC_N
Motif
Other DBs
NCBI-ProteinID:
ADJ46836
UniProt:
A0A0H3D868
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All DBs
Position
complement(5627134..5628294)
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AA seq
386 aa
AA seq
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MIADGRTLTGLTIDRVETFAVALPTVRSFGVSGGSIAVAGQPSLRILVKVSADGVAGWGE
ATPIPAWTYETAESIVTTIDRYLAPAILGRPCWDLRGVNNAFDHAINRGFSIGAPLAKSA
VDVALHDLLGHALGVPVGVLWGRRRREIIELGWVVSGQTEAEVAACVAEGRALGYRAFKV
KVGLHTALEDLAVVRAVRAASGAAPLWVDANQAYTVDTALWLARRLVELDVTAFEQPLPA
NDIVGLRRLRDVSPIPVALDESLRHPNDLATFVRLDAVAVAIAKVQRSGGLTLSRRLCVL
AEDSGVRLMGSGLTDSDLGLAASLHLFAAHGIDTPVDLNGRQFIGSVYTTGTTVVVSDGV
AQVPTGPGLGVEVDEAAVRELAVDVL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcggacggccggacgctgaccgggctcaccatcgaccgggtcgagacgtttgcc
gtcgcgctgccgacggtgcgttccttcggcgtctccggcggctccatcgccgtagccggg
cagccgagtctgcggatcctggtgaaggtcagcgcggacggagtggccgggtggggggaa
gcgaccccgatcccggcctggacctacgagacggccgagtcgatcgtcaccaccatcgac
cgctacctcgccccggcgatcctcggccgtccctgctgggacctgcgcggtgtgaacaac
gcgttcgaccacgcgatcaaccggggcttcagcatcggcgcgccgctggccaagtcggcg
gtggacgtcgccctgcacgacctgctcgggcacgcgctcggcgtgccggtgggcgtgctg
tggggccggcggcgtcgagaaatcatcgagctgggctgggtggtgtccgggcagaccgag
gccgaggtcgccgcgtgcgtcgccgaagggcgcgcgctgggctaccgggccttcaaggtc
aaggtgggcttgcacaccgcgctcgaggatctcgccgtcgtgcgcgcggtgcgcgcggcg
agcggcgccgcaccgctgtgggtggacgccaaccaggcgtacacggtggacaccgcgttg
tggctggcgcggcggctggtcgagctggacgtgaccgcgttcgagcagccgttgcccgcc
aacgacatcgtcgggctgcgccggctccgcgacgtgtccccgatcccggtggcgctggac
gagagcctgcgccaccccaacgatctcgcgacgttcgtgcggctggacgcggtggccgtg
gccatcgcgaaggtccagcgcagcggcgggctgacgctgtcgcgccggttgtgcgtgctg
gccgaggacagcggggtccggctgatggggtcgggcttgaccgattccgacctcggcctc
gccgcgtcgctgcacctgttcgccgcccacgggatcgacaccccggtggatctcaacggc
cggcaattcatcggctccgtgtacacgaccggcacgacggtggtggtctccgacggcgtc
gcgcaggtgccgaccggccccggtctcggcgtggaggtcgacgaagcggcggttcgtgaa
ctggccgtcgatgtcctgtga
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