Anopheles merus: 121598852
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Entry
121598852 CDS
T08889
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
amer
Anopheles merus
Pathway
amer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121598852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amer03021
]
121598852
Enzymes [BR:
amer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121598852
Transcription machinery [BR:
amer03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
121598852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
HMG_box
DUF5499
Motif
Other DBs
NCBI-GeneID:
121598852
NCBI-ProteinID:
XP_041782131
LinkDB
All DBs
Position
3L:34517587..34523511
Genome browser
AA seq
1746 aa
AA seq
DB search
MTIVNLDPTNLEFSVFTTEDVRKISVMKVESYRSFDDMGNPVKSGLYDPAMGPCGFGEIC
ATCTRDVSTCEGHFGLIELDLVVYNPFFMRTVSSLLRITCMSCARVQLQDGAKSLLELQL
RLADAGYIVEAEEIDVYKTKLQANPHDAIPEEITYYEDLLRKEPYNKLGNTKLSSTIRTA
IVNSTLRQESKRCIHCTKMLQRVRIADKKLTIRWTQADKKAFLEEKGNKNPTDEEVKSST
EVVLARESQMFLRKLYEQEGTLLSLLFPVLHSAKHETTQYPTDIFFMEVVPVPPCKMRPV
RRANRIPGRSSVMEHAQSVLLRNIFVANATVRAILLGSEGKEKPEGMSDATFGQLKSIHQ
QAKGATVTEKLFHAWCDLQSNVDQLLDVEKLSGGKQVVTFGLKQLIEKKAGLIRMHMMGK
RVNHAARTVITPDPNIGVEEIGIPTRFAKKLTYPVPVTPWNVAELRQWVMNGPDVYPGAN
MIEDANGRVSKISSTNVTQRQSLAKTLLTPHGAGAESSGDDTIKIVHRHLQNGDILLLNR
QPTLHRPSIMAHRAKILGGEKIFRLHYSNCKSYNADFDGDEMNAHLPQNEVARAEAYGLV
AVPYQYLVPKDGTPLGGLIQDHIVSAVKLFIRGKFFNREDYQQLVFQALSNKKGNIELLP
PSILKPVRLWSGKQIISTIIKNSTPKGMPYINLVGKSKLNNKHWCVLPARPWEYGGTPLR
ENELSESEVFIRQGELLSGILDKNHFGATPYGLIHCMYELYGGVCSTALLSSLSRLFTYY
LQWEGFTLGVRDILVQSKADRKRAKIIRECRAVAGHEAATSALELPASVSRDELAQRMRE
AYAKNPKFRAILDRKYKTVLDTYTNRINNACLPEGLISKFPENNLQLMVQSGAKGSTVNT
MQISCLLGQIELEGKRPPLMISGRSLPSFADFDTSPKSGGFIDGRFMTGIQPQEFFFHCM
AGREGLIDTAVKTSRSGYLQRCLVKHLEGLSVHYDMTVRDSDGSVIQYMFGEDGMDIAKT
QFIGNEKQTRFLDMNRDVIVQPEVLKRLQTSRDEDPLNEALKKHIKKMKRWTKQNGGGPT
EVQRVRTSAFALFSADHAEALRAELPNPDKVKKSGRTKLTEKLLKRWGKLEPAARREYVR
RAARCPDPVGAVFPPDSHYGVLSEKLEAMVRKYKRTEQPLHNIDELMQVKGSASLAAPGE
PVGVLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMCAAAEIKTPSMEIPFL
PHRKPERLKAVAEKLRKSLNRVTVDDVLENINIKSKLVVNPSRGMQHIIRFNFLPQDAYD
HDYCVTPSAILRHMSRKFFKAMFAAIRRAESAKNVLIDTEMQERKSKKHKKGADTEEDDE
IDRQEPEKVDKSEKAVYSDSDSDSDDGGTPAVDGDASDAKNRGKTKDEHDYDEDDENDAD
ADAAGASSDDSGVSEDEQEDEKEAQKQPAAGGKQKKKLPSAKASRSRCIEEALIEEYEKE
QDELGQELAAMPGAEQTLNEAEETMFLAQMNDQVSKFQHDRVAKRWCQIVLHMPLKLKEI
DFTKVLRDVAAKSVIWEVPRIKRAITYMQNDQLYLRTDGTNMSAMTAHAKVLDLNRLYTN
DIHAMANRYGIEAASRVIVKEIQNVFSVYGITIDPRHLLLVADYMTASGRYQAMNRMAME
SSVSPLQQISFESSLKFLKEALLKGTNDRLESPSSRLIVGQPCKVGTGSFTLYSSALKDY
AEASMA
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtgaaccttgacccaaccaacctcgagttctccgtctttacgacggaggac
gtgcggaagatcagcgtgatgaaggtggaatcgtaccggtcgttcgacgacatgggcaac
ccggtcaagtccgggctgtacgatccggcgatgggtccgtgcgggttcggtgaaatctgt
gcgacgtgcacccgtgacgtcagcacgtgcgagggccactttgggctgatcgagctggac
ctggtcgtgtacaatccgttcttcatgcgcacggttagcagtctgctgcgcattacctgc
atgtcgtgcgcccgggtgcagctgcaggacggagcgaaatcgttgctcgagctgcagctg
cggctcgccgacgccggctacatcgtcgaggcggaagagatcgacgtgtacaagacgaag
ctgcaggccaatccgcacgatgccataccggaggagattacgtactacgaggatctgctg
cgcaaggagccgtacaacaagctcggcaacacgaagctctccagcacgatccggaccgcg
atcgtgaacagcacgctcaggcaggagtcgaaacgttgcatccactgtacgaaaatgctg
cagcgtgttcgcattgccgacaaaaaactaacgatacgatggacgcaagcggacaagaag
gcgtttctcgaggagaagggaaacaagaacccaaccgacgaggaggtaaaatcgtccacg
gaggtggtgctcgcccgcgaaagccagatgtttctgcgcaagctgtacgagcaggaaggt
acgctgctgtcgctgctctttcccgtactgcactcggccaagcacgagacgacccaatat
ccgacggacattttcttcatggaggtggtaccggtgccgccgtgcaagatgcgccccgtc
cgccgagcgaaccgcatacccggccgctcctcggtaatggagcacgcgcagtcggtgctg
ctgcgcaacatcttcgtcgcgaacgcaaccgtgcgggccattctgctcggcagcgaggga
aaggagaaaccggaaggcatgagcgatgcgacgttcggccagctgaaatcgatccaccag
caggcgaagggcgccaccgtgacggagaagctgttccatgcctggtgcgatctgcagtcg
aacgtcgaccagctgctggacgtggagaagctgtccggcggcaagcaggtggtcacgttc
gggctgaagcagctgatcgagaagaaggccggcctgatccgaatgcacatgatgggcaag
cgggtgaaccatgcggcccgcacggtcatcacgcccgatccgaacataggggtggaggag
atcggcataccgacgcgtttcgcaaagaagctcacctacccggtccccgtgacgccctgg
aatgtggccgagctgcgccagtgggtgatgaacgggccggacgtctatccgggcgcgaac
atgatcgaagatgcgaacgggcgggtaagcaaaatatcgtccacgaacgtaacgcagcgc
caatcgctggccaaaacgctgctaacgccgcacggtgccggcgcggagtcgagcggtgac
gatacgatcaagatcgtccatcggcatctgcagaacggggatatactgctgctcaaccgg
cagcccacgctgcatcggccgagtataatggcgcaccgggcgaagattctcggcggggag
aagattttccgcctgcactactccaactgcaagtcgtacaatgcggactttgatggggat
gaaatgaatgctcatctgccgcagaacgaggtggcccgggcggaggcgtacgggttggtg
gcggtgccgtaccagtacctagtgccgaaggacggcacaccactgggtggtttaattcag
gatcatatcgtatcggcggtgaagcttttcatacgcggcaagtttttcaaccgggaggac
taccagcagctggtgtttcaggcgctgagcaacaagaagggcaatattgagctgctgcca
ccgtccatcctgaagccggtgagactgtggtccggcaagcaaatcatctcgaccatcatc
aagaacagcacaccgaagggcatgccgtacatcaacttggtgggaaagtcaaagctaaac
aacaagcattggtgtgtgcttcccgcccgtccctgggagtacggtggcacaccgctccgc
gagaacgagctgtccgaatcggaggtgttcatccggcagggtgagctgctgagcggcatc
ctcgacaagaaccacttcggcgccacaccgtacggtctgatccactgcatgtacgagctg
tacgggggcgtctgctccaccgctctcctttcgtccctgtcgcggctcttcacctactac
ctgcagtgggaagggttcacgctgggcgtacgggatattctggtgcagagcaaggcggat
cggaagcgggccaaaattatacgcgagtgtcgcgcagtggccgggcatgaagcggccacc
tcagccctcgagctgccggctagcgtttcgcgcgacgagctggcccagcgcatgcgggaa
gcgtacgcgaagaatccaaagtttcgcgccatactcgaccggaagtataagaccgtgctc
gatacgtacaccaacaggattaacaacgcatgcctgccggaaggcttgatcagcaagttc
ccggagaacaatctgcagctgatggtacagtcgggtgcgaagggttcgaccgtcaacacg
atgcaaatctcgtgcctgctcgggcagatcgagctggaaggcaaacgacccccgctcatg
atttccggccgttcgctgccgagctttgctgattttgatacgtcaccgaagtcgggcggc
tttatcgacggccggtttatgacgggcatacagccgcaggagttcttcttccactgtatg
gcgggtcgggagggtctgatcgatacggcggtgaaaactagccgctccggctacctgcag
cgctgtctggtgaagcatctcgagggcctgtcggtgcactacgacatgacggtgcgggac
agcgacggcagcgtgatccagtacatgttcggcgaggacggtatggacattgcgaagacg
cagttcatcggcaacgagaagcagacgcgctttctcgacatgaaccgggacgtgatcgtg
cagccggaggtgctgaagcggctgcagacgtcccgcgacgaggatccgctgaacgaggcg
ctgaagaagcacatcaaaaagatgaaacgctggacgaagcagaacggtggaggtccaacg
gaggtgcagcgcgttcgcacgtccgcttttgcactgttttccgccgaccatgcggaagca
ttgcgggcggagctcccgaacccggacaaggtgaaaaagtcgggccgtacgaagctgacg
gagaagctgctcaagcggtggggcaagctggagccggcggcccggcgcgagtacgtgagg
agggcggcccgctgtcccgatccggtcggtgccgtctttccgcccgattcgcactacggc
gtgctgtcggagaagctggaggcgatggtgcgcaagtacaagcgcaccgagcagccgctc
cacaacatcgacgagctgatgcaggtgaagggcagtgcgtcgctggcggcgccgggcgaa
ccggtcggcgtgctggcggcccaatcgatcggcgaaccgtccacgcagatgacgctcaac
acgttccacttcgcggggcgcggtgagatgaacgtgacgctcggtattccgcgtctgcgc
gagattctgatgtgtgcggcggccgagatcaagacaccgtcgatggagataccgttcctg
ccgcaccgcaaaccggagcggctgaaggcggtggccgagaagctgcgcaaatcgctcaac
cgtgtcacggtggatgatgtgctggagaatattaatatcaagtcgaagctggtggtgaat
ccttcgcgcggcatgcagcacatcatacgcttcaacttccttccgcaggacgcgtacgat
cacgactactgcgttacgccgagcgccattcttcggcacatgtcgcgcaaatttttcaaa
gcaatgtttgccgccattcggcgagcggaatcggcgaagaatgtgctaatcgacactgaa
atgcaggaacgcaaatcgaaaaagcataagaagggggctgacactgaagaggacgacgag
atcgatcgccaggaaccggagaaagttgataagagcgagaaggctgtgtattcggatagc
gacagtgactcggacgatggtggcacgccggctgttgatggggatgcatcggatgcgaag
aaccggggcaagaccaaggacgagcatgattacgacgaggacgatgagaacgatgcggat
gcggatgctgcgggggccagctccgacgactcgggcgttagcgaggacgagcaagaggat
gagaaggaggcgcaaaagcagccagcagcggggggaaagcaaaagaaaaagcttccgtcc
gccaaggcatcgaggagtcgctgcatcgaggaggcgctgattgaggagtacgaaaaggag
caggacgagctggggcaggagctggcagcgatgcccggcgccgagcaaacgctgaatgaa
gcggaagagaccatgtttttagcgcagatgaacgaccaggtcagcaagttccagcacgat
cgggtcgccaaacggtggtgccagatcgtgctgcacatgccgctgaagctgaaggagatc
gacttcaccaaggtgctgcgcgatgtggccgccaaatcggtgatctgggaggtgccccgg
atcaagcgcgccatcacgtacatgcagaacgatcagctgtacctgcgaacggacggtacg
aacatgtcggcgatgacggcgcacgcgaaggtgctggacctgaaccggctgtacacgaac
gacattcacgcgatggccaaccggtacggcatcgaggcggcgtcgcgcgtgatcgtgaag
gaaatacagaacgtgttcagcgtgtacggcatcacgatcgatccgcgccatctgctgctg
gtggcggactacatgacggcgagcggccggtaccaggcaatgaaccgcatggcgatggag
tcttcggtctcgccgctgcaacagatttcgttcgaatcgtcgctcaagttcctgaaggag
gcgctgctgaagggcacgaacgatcggctcgagtcaccctcgtccaggctgatcgtgggc
cagccgtgcaaggtgggcacgggctcgtttacgctctactcgtccgccctgaaggactat
gccgaggcgtcaatggcataa
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integrated database retrieval system
