Astyanax mexicanus (Mexican tetra): 103023224
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Entry
103023224 CDS
T05042
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03020
RNA polymerase
amex04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103023224 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103023224 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103023224 (polr3a)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103023224 (polr3a)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
103023224 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
103023224
NCBI-ProteinID:
XP_022524782
Ensembl:
ENSAMXG00000018852
LinkDB
All DBs
Position
15:complement(15795616..15870794)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLSYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHIGYFKATIGILQMICKTCSRIMLSKE
ERQQFLDYLRRPGLAYLQKRGLKKKISDKCRKKNVCLYCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDPIVSDFLQSFDIAIEHNKEVESLLSRAQENLNPLVVLNLFRRIPNEDVPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELMRKLVKNGPDVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKLGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIVASILVGKDEKIKVTLPRPAIIKPMRLWTGKQI
FSLILKPSQSCPVKANLRTKGKQYCGKGEDLCSNDSFVVIQNSELLCGSLDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQELLDAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILRELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPNEPALSKNELVLTTDSIMKRTDFAC
CRDTFLQEIKKFISGVSEKIKKTRDKYGINDNGSTEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDTEDDADFARLVKGRIEKTLLGEISEYIDEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQWLKQELPKVV
VQGIPEVARAVIHIDDQSGRQKFKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHRADKDPTPPRRPLLFD
SPDFHISLAS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacggatgtggccaaaaagataagccacatctgtttt
ggtatgaagtctgcagagcagatgcgtcagcaggctcatatccaggtggtcagtaagaac
ctgtacagtcaggacaccagccacacgccactgtcctatggagtgctggaccaccgcatg
ggcactagcgagaaggaccgcccatgtgagacctgtggaaagaatctggctgactgtctc
ggccactatgggtacctggatctagagctgccctgcttccatatcggatattttaaagcc
acaatagggatcctgcagatgatctgtaagacgtgttctcggatcatgctgagtaaggag
gagaggcagcagtttttggattatctgcgccggcctggactcgcctatctgcagaaacga
ggtctgaagaagaagatctctgacaagtgcaggaagaaaaatgtctgcttatactgcagc
gccttcaatggtccggtaaagaagtgtggtctactgaagatcatccatgagaagtataag
accaccaagaaggtggtggaccccatcgtctctgatttccttcagtcttttgacattgct
attgaacacaacaaggaggtggagtcactcctgagcagggcacaggagaatctcaaccca
ctggtggttctgaatctgttccggaggattcctaatgaagacgttcctctgctgctgatg
aaccctgaggcgggtaaacctgctgacctcattctgacccgcctccttgtcccacccctc
tgtatccggccttcagtcgtcagtgacctcaaatcaggcactaatgaggacgacctcacg
atgaagctcacagagatcatcttcctcaatgacgtcatcaagaagcaccgtatgtcgggg
gctaagacacagatgataatggaggactgggatttcctgcagctgcagtgcgctctctac
atcaacagcgaactgtccggcatccccctcaacatggcccccaagaaatggacgcgaggc
ttcgtacagaggctgaagggaaaacaaggtcggtttcgtggcaatctgtctggaaagaga
gtggatttctctggacgaacggtcatctctccagacccgaatctgaggattgatgaagtg
gctgtaccagttcatgtggccaaaatcctcacatacccggagaaggtaaataaagctaat
attgagctgatgaggaagctggtgaagaacggtccagatgttcatcctggcgctaacttc
atccagcagagacacatgcagatgaagaggtttctgaagtacgggaaccgggagaagatg
gctcaggagctgaagctgggcgatgtggtggagaggcacatgatcgacggagacatcgtc
ctcttcaaccgacaaccctccctgcacaaactcagcatcatggcccacattgctcgtgtg
aagccccacaggacgttccgctttaatgaatgtgtgtgtacgccatataatgctgacttt
gatggagatgagatgaaccttcacctgccgcagactgaggaggccaaggctgaggcgctc
gtcctcatggggacgaaggctaacctggtgaccccaagaaacggtgaacctctgatcgct
gctattcaggattttctgacaggtgcgtatctgctcactctgaaggacactttcttcgac
cgagcgaaggcctgccagattgttgcatcaattttggtgggaaaagatgaaaaaatcaaa
gtaactcttcctcgcccagccatcatcaagccgatgcgtttatggacggggaaacagatc
ttcagtctgatcctgaagcccagccagagctgccctgttaaagccaacctgcggaccaaa
ggaaaacagtactgtggtaaaggagaggacctgtgttccaatgactcctttgtggtgatc
cagaacagtgagctgctctgtggcagtttggataaaggcactctgggttctggatccaag
aacaatatcttctacatcctgctgagggactggggacagctggaggctgccaacgccatg
agccgccttgccaggctcgcacctgtttacctgtctaatcgtgggttctccattggtatt
ggtgatgtgactcccggtcagggtctgctgaaggccaagcaggagctgctggatgctgga
tataagaagtgtgacgagtacattgaggctttaaacacagggaagctgcagcagcagccg
ggctgcactgctgaggaaactctggaggcactgatcctgagggagctgtcggtgatcaga
gatcatgctggcagtgcgtgtctgagggagctggataagagtaacagtccactgatcatg
gcgctgtgtggatctaaaggttctttcattaatatctctcagatgatcgcgtgtgtgggt
cagcaggccatcagtgggtctcgtgttccggacgggtttgagaatcgctcgctgccacac
tttgagaagcactccaaacttcctgcagcgaagggttttgtagcagacagtttctattcc
ggtttgacccccactgagtttttcttccacaccatggccggcagagaagggctggtggac
acagccgtcaaaacagccgagactggatacatgcagaggcgtctggtgaagtctctggag
gacctgtgctcccagtatgacctcacggtccgcagctccactggagatatcatccagttc
atctacggtggggacggcctggaccctgcagccatggagggcaaagacgaaccactggag
ttcaagagagtgctggataatatcagagcggtctacacgtgtcctaatgaaccggctctg
agtaagaatgagttggttctgactacggattccatcatgaagaggaccgacttcgcctgc
tgcagagacacctttctccaggagattaagaagttcatcagtggcgtctcagagaaaatc
aaaaagaccagagataaatatggaataaatgacaacggatcaacagagcctaaagttttg
taccagctggacaggatcactccgacccagctggagaagtttctggaaacgtgcagagac
aagtacatgagggcccagatggagccgggttcagctgtaggtgctctgtgtgctcagagt
attggagaaccaggcactcagatgaccctgaaaacgttccacttcgctggtgtcgcttcc
atgaacatcactctgggagttcctcgcattaaggagatcatcaacgcgtccaaaaacatc
agcacccctattattactgctcaccttgatacggaggatgatgcagactttgctcggctg
gtgaagggcaggattgagaagacactgcttggggagatttcagagtatatagatgaagtg
tttctgccggatgactgctttatactggtgaagctttcactcgagaggatccgcctcctt
cgactagaggtgaatgcggagacggtgcggtactccatctgtatgtcgaagctgagggtg
aagccgggggatatagcggttcatggtgaagcggtggtctgtgtgtctcccagagagaac
agcaagagctccatgtactacgtccttcagtggctcaaacaggaactgcccaaggtggtt
gtgcagggtatccctgaggttgcccgagccgtgattcacattgatgaccagagcggcagg
cagaagttcaaactgctggtggagggggataacctgcgtgcggtcatggcaacccacggc
gtcaatggcagccgaactacatccaataacacatacgaggtggagaaaactttaggtatc
gaggctgctcggaccaccatcatcaatgagatccagtacaccatggtgaatcacggcatg
agcatcgatcgcagacacgtcatgctgctggccgacctcatgtcctacaaaggggagatc
ctgggcatcacgcgttttggcctggcgaagatgaaggagagcgttctgatgttggcgtcg
tttgagaagacggctgatcatctgttcgacgcagcgtatttcgggcagaaggactcagtg
tgtggtgtgtcggagtgtattataatgggcattccaatgaacattggcacagggctgttt
aaattattacacagagcagataaagaccccacaccccctcggagacccctgctgttcgac
agcccagactttcacatctcactggcctcgtaa
DBGET
integrated database retrieval system
