Astyanax mexicanus (Mexican tetra): 103025257
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Entry
103025257 CDS
T05042
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04020
Calcium signaling pathway
amex04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103025257 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103025257 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103025257 (grin2ca)
Ion channels [BR:
amex04040
]
Ligand-gated channels
Glutamate (ionotropic)
103025257 (grin2ca)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
103025257
NCBI-ProteinID:
XP_022529456
Ensembl:
ENSAMXG00000039510
LinkDB
All DBs
Position
19:complement(28993358..29130152)
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AA seq
1424 aa
AA seq
DB search
MGVRLGSLSDSLWPLSLLLLLLLLLYASPCCQGRPFTMIEPTVNVAVVFSGSAYQLEIKG
RLSRENFLDLPLEVNPITVLVNNTNPRALLTRICDTLAANRVHGVVFEDNIGSEAVAQIL
DFISTQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVV
TSQYPGNEAFVDYIRSFTDTSYFLWELQDVLTFDMSADGMNDLRARRLLQQIDAQVLLVY
CSHDEAQYLFSMAKEVGLLGPGYIWIIPSLAVGNPNVPPPDSFPVGLISIITDRWKMSLR
NRVRDGVAIVVKAVESFRKQRGFVPDGHTDCQTPLRPDTNDTLFTHMLNVTWEHTDFSFN
SDGYLVNPAMIIITLDRERQWDKVGRYESGILQMRYPVWPRYGTYLEPVSDNRHLTVATL
EERPFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIIGHTEPYTKLCCKGFCIDILKKLSR
NIKFSYDLYLVTNGKHGKLVRGVWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFV
ETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYCSPVGYNRSLV
SAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANL
AAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYN
QKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKGS
RWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMG
LSLLVFAWEHLLYWKLRHSVRRSERLDFLLAISRGIYSCFNGVEETDHNGSMQSPDITTN
YTQANMLKMLKTAKDIVSSARVENSLDNATKTIEHWSRRGPDPTKPCLPTRLISTDASHG
RLPYISSVTDNHIPYAQRALTATFPLHYGDSTTQPLLEKPRVVTRPTPLRYTLPARTSHH
HIYERTLPISSLSSPHIAMRDPPPPTAPKPHHSNRLYMDNQACHQTTSPFFPYRTFHVPD
IYVEHQEPPESQKLYGEGLGRKKRSHSYVAPSPETRRRNDYDEPTSCLAELRANHLLENH
AHTTPCMGSHYQRPAAAASCNSCMKPYLEPDMDDVPLLGKEKLNRRASFLRATWGGDRIR
HIDEKPSTSASSSTRITMPDLFPRVVVANPKPSKMYGSTGNNLCYNMAVEPAYLDPAHMG
SYPYKPHKLKHSQSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPV
AQGPTHFYDPSKDMCHLFPCVNHCPDNVALVPRLGSRPVMYQNNAFVGYEGAGRSRDEPP
LQPMHTLPASSGNRDRRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctgggcagcctgagcgactctctgtggccgctgtcgctgctgctgctg
ctgctgctgttgctctacgcctcaccctgctgccagggccgcccgttcaccatgatcgag
cccaccgtcaacgtggccgtggtgttcagcggctccgcctaccagctggagatcaagggc
cgcctgagccgggagaacttcctggatctgccgctagaagtgaaccccatcaccgtgctg
gtgaacaacaccaacccgcgggcgctgctgacgcgcatctgcgacacgctggcggccaac
agggtgcacggcgtggtgttcgaggacaacatcggctcggaggccgtggcacagatactg
gacttcatctccactcagacggccgtgcccattgtgggcatcagcgggggatctgcagtc
gtcctgccgcacaagggggacggctccaccttcctgcagctggggtcttccatcgagcag
cagatcaatggcatgttcaaggtgatggaggaatataactgggacagctttgtggtggtg
accagccagtatcctggcaacgaggccttcgtggactacatccgctccttcaccgacact
tcctacttcctgtgggagctgcaggacgtcttgacttttgacatgtcggccgacggcatg
aacgacctccgcgctcgccggctgctgcagcagattgacgctcaggtgctgctggtgtac
tgctcccacgacgaggcccagtacctcttctccatggccaaggaggtgggcctgctgggg
cccggctatatctggatcatccccagcctggcagtggggaaccccaacgtccccccgccg
gacagcttccccgtagggctaattagcattatcactgaccgctggaagatgagtctgagg
aacagggtgagggacggagtggcgatcgtggtgaaagcagtggagagcttccgtaagcag
aggggcttcgttccggacggacacacggactgccagaccccactgcggccagataccaac
gacacgctcttcacacacatgttgaacgtgacatgggagcacacagacttctccttcaac
agtgatggatatctggtgaacccggccatgatcatcatcacactggaccgggagaggcag
tgggacaaggtgggacgttacgaatcagggattttacagatgcgctacccagtttggcca
cgttatggaacgtacctggagccagtatctgacaaccgtcacctgacagtggccacactg
gaagagagaccttttgtgatagtagaggctgtcgaccccgtgacaggaacctgcctcagc
aacactgtgccctgcagacgccagtccaacaagactgagacgatcattggacatactgag
ccatacaccaaactgtgctgtaaaggattctgcatcgacatcctgaagaaactctcccgc
aacatcaagttctcctacgacctctacctggtaaccaatgggaaacacggcaagctggtc
cgaggcgtctggaacggcatgattggagaggtggtctacaagagagcagacatggccatt
ggatctctgacgataaacgaggagcgttctgagatcattgatttctcggtgccgttcgtg
gagacggggatcagtgtgatggtcgctcggagcaacgggacagtctcgccctctgccttt
ctggagccctacagtccagccgtgtgggtgatgatgtttgtgatgtgtctgacagtggtg
gcagtgaccgtgtttgtgtttgagtattgcagtcctgttgggtacaaccgcagcctggtc
agtgccaaagatcccggtgggccgaccttcaccattgggaagtccgtgtggctgctctgg
ggtattgtcttcaacaactccgtccccatcgagaaccccaaaggcaccaccagtaagatc
atggtgctggtgtgggctttcttcgctgtgatctttctggccagttacaccgccaacctg
gcagcgttcatgatccaggagcagtacatcgacaccgtctccggactcagcgataaaaag
tttcagaaaccgcaggagcagtatccaccctttcggtttggtacagttcctaacggcagc
acggagagaaatatacgcagtaactaccccgagatgcattcccacatggtcaaatataat
cagaagggtgtggaggacgctctgaacagcctcaagactgggaaacttgatgccttcatt
tacgacgcagctgtgctgaactacatggctggtaaagatgagggctgtaaactggtaact
atcggcagtggcaaggttttcgccactactggctacggcattgccttacaaaaagggtcc
cgctggaaacggcccattgacctcgccctccttcagttccttgcagacggcgacactcag
aagctgcagacggtgtggttgacagggatttgccgaaacgagaagaaggaagtgatgagc
tccaagctggatatagacaacatggcaggagtgttctacatgctgctagtggccatgggc
ctcagcctgctggtcttcgcctgggagcacctgctctactggaagctccgccactctgta
cgcagatccgaacgcctggacttcctactggccatcagcagaggaatctacagctgcttc
aacggcgtggaggaaaccgaccacaatggaagcatgcagagcccagacatcaccaccaat
tacacccaggccaacatgctgaagatgctcaagacagccaaggacatcgtatcctctgcc
agagtggagaactccctggacaacgccacaaagaccatcgagcactggagccgccgaggt
ccagatcctactaagccttgtcttccgacccgcttgataagcactgatgccagtcatggc
cgcttgccctacatctccagtgtcacagacaaccacataccatatgcccagagggccctg
actgccactttccccctgcattacggagacagcaccacccagcccttgctcgagaagccc
cgggtcgtgacaagaccgacccctctacgctatactctacctgcaaggaccagtcaccat
catatatatgaacgcacactccctatttccagtctaagcagtccacacattgctatgagg
gacccaccgcccccaacagctcccaaaccccaccacagcaacaggctgtacatggacaac
caggcgtgccatcaaacaacatccccttttttcccctatcgcacattccacgtccctgac
atctacgtagaacaccaggaacctcccgagagccagaaactgtacggcgaaggtcttggc
cgcaagaagaggtcccacagctatgtggctccatccccagaaacccgtcgcaggaacgac
tacgatgaaccgacgtcttgcctagccgaacttagagccaatcacctcttggaaaaccat
gcgcataccaccccttgcatgggcagccactaccagaggccagctgcagctgctagctgc
aactcctgcatgaagccgtacctggagccagacatggatgacgttcctctgctgggcaag
gagaagttgaaccgtcgcgcctctttcctcagagccacatggggcggcgacaggattcgc
catatcgacgaaaagccctccacttctgcatcgtcctcaactcgcatcaccatgcccgac
ttgtttcctcgcgtcgttgtagccaatcccaagccatcgaagatgtacggcagcactggc
aacaacctctgctacaacatggcggtggaaccggcctacctggacccagcccacatgggt
tcttacccgtacaaaccccacaagctcaagcactcccagtccactcgccttccctcgtac
cgggaggcgatcctccagaatgcagcggctctacgacggtcatcttcaaccgtagtgcac
agacattactccacctacctgaactcttatactgaccttccagtatatgtgggtccagtg
gcacaaggacccacacacttctacgatccctccaaagacatgtgccacctgttcccttgc
gtcaaccactgcccggataacgtcgccctggtaccccggttaggtagcaggcctgtaatg
taccaaaacaatgctttcgtaggctacgagggtgctggacgctcacgtgacgagccaccg
ctgcagccaatgcacacgttaccggcttcctccgggaacagggaccgcaggcaggttttg
gtggcgcgacgggtgaatagtccctatgtgccaaagccctggggcagagtgtctagtctg
gagtctgaggtctga
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integrated database retrieval system
