Astyanax mexicanus (Mexican tetra): 103028834
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Entry
103028834 CDS
T05042
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X2
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103028834
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103028834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
103028834
NCBI-ProteinID:
XP_007241580
Ensembl:
ENSAMXG00000006225
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MACLLPPTGTDVFRRFTPETLVEIERRMVEEASEQERKKALNIEVAEEDLPKPSSDLEAG
KSLPFIYGDPPPELLNVPLEDLDPYYKAQKTFIVISKGNTINRFNAESACYILNPFSPVR
RGAIRILIHSLFSMFIMVTILSNCVFMTMSNPPEWSKIMEYVFTGIYTFEALIKVLSRGF
CIGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVVWPPVFPLINGTTNMNATAS
FSDKLYANSSFDYEEYINNEENYYFIPGSMDALLCGNSSDSGRCPEGYMCLKAGRNPNYG
YTSYDNFGWAFLALFRLMTQDFWENLFQLTLRSAGKTYMIFFVVIIFLGSFYLINLILAV
VAMAYAEQNEATKAEAKAKEEEYEIMLEQLRKHAEQKKGMANGSCTSLSSKKKDDGSSEH
DLTDDGGGRVRTQHDSIALKEVSKLNGSKASMNHLDVTNGHNRKPSVAGSAIDELEELER
PCPPCWYTFADIFLKWDCCTPWIRFKKFVYFIVMDPFVDLGITICIVLNTVFMAMEHYPM
TAEFESVLSVGNLVFTGIFTAEMVLKLIAMDPYYYFQVGWNIFDSIIVTMSLVELGLANV
EGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
AGSYKSCVCKISEDCELPRWHMTDFFHSFLIVFRILCGEWIETMWDCMEVAGQGMCIVVF
MMVMVIGNLVVLNLFLALLLSSFSGDNMASDDDGEMNNLQIAIGRITRAVDWVKATVTGQ
ARSVLGLKPVEKEKKGNDEDDFRCNNDLVLTHMESGDKLDGAAERAIVLSVKVPMAKRES
DFESPYDDTSDDEDKKADEKSKLKDSGGDDSSCSTVDKPPEVEEAESEEEEDPTTPEDCY
TEKCIRRCPCLDLDITQGRGKSWWAFRKTCFLIVEHNYFETFIIFMILLSSGALAFEDIY
LEQRRTIKIILEYADQVFTYIFVVEMLLKWCAYGFKTYFTNAWCWLDFLIVDVSLISLTA
NILGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVMLVCLIFWLIF
SIMGVNLFAGKFYHCINTTSEELFPPEVVNNKSECFLLIEGGYDARWVNQKVNYDNVGMG
YLSLLQVATFKGWMDIMYAAVDSRNVEDQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKSKLGGQDLFMTEDQKKYYNAMKKLGSKKPQKPIPRPQNCCQGFVFDLVTKQ
FFDILIMVLICLNMITMMAETDEQSIEVEEILFYINFAFIVIFTGECALKIIALRQYYFS
VGWNIFDFIVVILSILGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLF
ALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEMGIDDMFNFETFGNSIICLFMIT
TSAGWDGLLSPILNSAPPDCDPDIQNPGSDVRGNCGNPAVGIVFFCTYIVISFLVVVNMY
IAIILENFNVATEESGEPLCEDDFEMFYETWERFDPDASQFIAYSSLSDFCDTLKDPLRI
PKPNTIKLITMDLPMVPGDKIHCLDILLALTAEVLGESEAMDSLKATMEEKFMANNPSKV
SYEPITTTLRRKQEEVAAVVIQRAYRKHVLKRTLKQASYMFREKSDLTRKGEEPPEKVGM
VAKQLSQLYGDHAVEELPPASILRLQKRDIAGKARGKIPSVEVQSEVILHSAPFSAPESS
AYVDNLRESIV
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcctgctcccccccacaggcaccgatgtgtttcgccgcttcacgccggagacg
ctggtggaaatcgagcggcgcatggtggaagaagcttctgagcaggagcgcaagaaagcc
ctgaacattgaggttgctgaagaggaccttcctaaaccctccagtgacctggaggcaggg
aagtctttgcccttcatctatggagacccaccaccagagctcctcaatgtacctctggag
gacctggacccatactacaaagcacagaaaaccttcatcgtgatcagtaaaggaaataca
atcaatcggttcaatgcagagtctgcctgttacattctaaatccatttagtcctgtccgc
cgaggagccatcagaatactcatacattcattgttcagcatgttcatcatggtaacaatc
ctgtccaactgtgtgtttatgacgatgagtaaccccccagaatggagcaaaattatggaa
tacgttttcacaggtatctacacgtttgaggcactgattaaagtcttgtctagaggattc
tgtattggagactttacattccttcgagatccatggaactggctggatttcatggtgatt
agcatggcgtatcttacagagtttgtggacctggggaacgtgtcagctctgaggaccttc
cgtgttctccgagccctgaaaactattactgtaattcctggtctcaaaaccattgttggt
gcgctcatccagtccgtaaagaaactagcagatgtcatgatcctgaccgtcttctgtctc
agcgtctttgcgctcatcggccttcagctgttcatgggaaatctgcgccagaagtgtgtc
gtttggcctccggtattcccactcatcaatggcacaacaaacatgaatgcgacagcaagc
ttcagtgacaaactatatgcaaatagttcttttgactatgaagaatacatcaataatgaa
gagaactactactttattcctggttctatggatgcacttctgtgtggaaacagctctgat
tctgggcggtgtccagagggatacatgtgcctgaaagctgggaggaacccaaattatgga
tacaccagctacgacaacttcggctgggccttcctcgcactcttccgcctcatgacccaa
gacttctgggaaaacctgtttcagctgactcttcggtctgctgggaagacctacatgatc
ttctttgtcgtcataatcttcttgggctctttctaccttatcaacctcattctggctgtg
gtggccatggcatacgcagaacaaaatgaggccaccaaagctgaagctaaagcgaaggaa
gaggaatatgagataatgctggaacagctgaggaaacatgctgagcaaaaaaagggcatg
gctaatggcagctgcacctcactctcaagcaagaagaaagatgatggcagttctgagcat
gatttaactgatgatgggggtggcagagtgaggacccaacatgacagcattgctctgaaa
gaggtatcaaaactgaatggatccaaagcaagcatgaaccacctagacgtgaccaatggg
cataatagaaaacccagtgtagcgggcagtgctatagatgaattagaagagttggaaaga
ccttgcccaccttgctggtacacatttgcagacatattcctaaagtgggactgctgcaca
ccatggatccggtttaaaaagtttgtgtacttcattgtgatggacccttttgtggacctg
ggcatcactatctgcatcgttttgaacactgtgttcatggccatggagcactacccaatg
actgcagagtttgaatcagtcttaagtgttgggaacttggtcttcacaggcatcttcaca
gctgagatggtcctcaaactcatcgcaatggacccatactactacttccaggtcggctgg
aacatattcgacagtatcatagtaacaatgagcctagtggagctgggcttggccaatgta
gaaggactgtctgtgctcaggtccttccgtcttatgcgtgtcttcaagctggcgaagtcc
tggccaacgctaaacatgctgattaagatcatcggtaactctgtgggtgccctcggcaac
ctcacccttgtcttggccatcatcgtcttcatctttgctgtggtggggatgcagctgttt
gctggcagctacaagagctgtgtgtgcaagatctctgaggactgcgagctgccccgctgg
cacatgaccgacttcttccattccttcctcatcgtgttccggatcctgtgcggggagtgg
atcgagaccatgtgggactgcatggaggtggcgggtcagggcatgtgcatcgtagtcttc
atgatggtcatggtgatcggcaacctggtggttttgaacctcttcttggctttgctgctt
agctccttcagtggagacaacatggcatctgatgacgacggtgaaatgaacaaccttcag
attgccattggaagaatcaccagggccgttgactgggttaaggccactgttactggacag
gccaggagtgtgctaggtctcaagcctgtggaaaaagagaaaaaaggaaatgatgaagac
gacttcagatgcaacaacgatttagtcctaacccacatggaatcaggggataagctggat
ggtgctgctgaaagagctattgtcctttcagtcaaagttccaatggcaaagcgggagtct
gattttgaaagcccttatgatgacacgtctgatgatgaagacaagaaagctgatgaaaaa
tcaaaactaaaagactcaggtggagatgactcgtcttgcagcaccgtggacaagccaccc
gaggtagaagaagctgaatcagaggaagaagaagatccaaccaccccagaggactgctat
actgagaagtgcatcagacggtgtccctgcctggatttagatatcactcagggcagagga
aagtcctggtgggccttccggaagacctgcttcctcattgtggagcacaactattttgag
accttcatcatcttcatgattctgcttagcagcggtgctttggcttttgaggacatttac
cttgagcaacgaagaacaattaaaataatcctggagtacgcagatcaagtcttcacatat
atctttgtggtggagatgctccttaagtggtgtgcatatggtttcaagacttacttcaca
aatgcttggtgttggctggacttcctcattgttgatgtctccttgatcagtttgactgca
aacattttgggttattctgagcttgggccaatcaaatccctgcggacactgagagcactg
aggccacttcgtgctctatctagatttgaaggaatgagggtggtggtcaatgctctggtt
ggggccatcccctctattttcaatgtcatgctggtgtgcctgattttttggctaatcttc
agtataatgggagtgaatctgtttgctgggaagttctaccactgcattaacaccacctct
gaggagctcttccctcctgaggtggtcaacaacaaaagtgaatgctttttactcattgaa
ggtggttatgatgcacgatgggtaaaccagaaggtcaactatgacaatgtgggcatggga
tacctgtctctgctgcaagtggctacgtttaaaggatggatggatataatgtatgctgct
gtggattctcggaacgtagaagatcagccatcttatgagataaacctctacatgtacata
tactttgtgattttcatcatctttggatcattcttcaccctcaatctgtttattggtgtc
atcattgacaatttcaaccaacaaaagtcaaagttaggagggcaagacctctttatgaca
gaagatcagaagaaatactacaacgccatgaagaagctaggttctaaaaagccacagaaa
cctatcccacgcccccaaaactgctgtcaaggcttcgtcttcgacctcgtcacaaagcag
ttctttgacatcttgataatggtgttgatctgtctgaatatgatcaccatgatggcggag
acagatgagcagagtatagaagtagaggaaatcctcttctacatcaattttgcttttatt
gtgatcttcactggcgagtgtgcgcttaaaatcattgcccttcgtcagtactacttctct
gtgggatggaatatttttgatttcatcgtggtcattctttcaattttgggcatagtgctg
gcagacatcattgagaaatattttgtgtcacccacccttttccgtgtcatccggcttgcc
aggataggccgtgttctgcgtttgatccgaggagctaaaggcattcggacgctgttgttc
gctctcatgatgtctcttcctgctctctttaacatcggcctgctcctctttttaatcatg
ttcattttctccatatttggcatgtccaactttgcctatgtgaaaaaagaaatgggcatc
gatgacatgttcaattttgaaacctttgggaacagcatcatatgcctctttatgatcacg
acttctgcaggatgggatgggctcttgtcacctatccttaacagcgcacctcctgactgc
gatccagatatccagaaccccggctcggacgtcaggggtaactgtgggaacccggccgtg
ggaatcgtctttttctgtacctacattgtcatatccttccttgtggtggtcaacatgtac
atcgctattatcctggagaacttcaacgtggcaactgaggagagtggcgagcccttgtgc
gaggatgactttgagatgttctatgagacttgggaaaggttcgacccggatgcttctcag
ttcattgcctacagctctctgtctgatttctgcgacacgctgaaggacccactgaggatt
cccaagccaaacacgataaagttgatcaccatggacctccccatggtaccaggcgacaag
atccactgtctggacatcttgctggctctcacagctgaagtgcttggtgagtctgaggct
atggactctctcaaagcgaccatggaggagaaattcatggccaacaatccatccaaagtg
tcttacgagccaataaccaccactcttcggcgcaagcaggaggaggtggctgccgtggtc
atccaaagagcctaccgtaagcacgtgctcaagcgcactctcaaacaagcctcttacatg
ttcagagaaaagtctgatttgacaaggaaaggcgaggagcctccagagaaagtaggaatg
gttgcaaaacaactgagccagctgtacggtgatcacgctgtggaggagcttcctcctgca
agcattcttcgcctacagaaaagggacatagcaggaaaagcaaggggaaagatcccctct
gtagaggtgcagagcgaggtgatcttgcactctgctcctttcagcgcccccgagtcttca
gcttatgtggacaatctgagagagtctattgtgtag
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integrated database retrieval system
