Astyanax mexicanus (Mexican tetra): 103030213
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Entry
103030213 CDS
T05042
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00900
Terpenoid backbone biosynthesis
amex01100
Metabolic pathways
Module
amex_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103030213 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amex01006
]
103030213 (ggps1)
Enzymes [BR:
amex01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103030213 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103030213 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
103030213 (ggps1)
Prenyltransferases [BR:
amex01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103030213 (ggps1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
103030213
NCBI-ProteinID:
XP_007238589
Ensembl:
ENSAMXG00000003660
UniProt:
A0A8T2LZB3
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All DBs
Position
25:complement(45281756..45298700)
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AA seq
318 aa
AA seq
DB search
MDGLEGAATERILLEPYNYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQIIIEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLMLDNPEAVHVFTRQL
LELHRGQGMDIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSEWKRDLKPLLDT
LGLFFQIRDDYANLSSREYSANKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRKTLRELEAEAYRLIKELGGNPELEGLIEHLSRMYKEPE
PASSSSASASASDSQSKQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggatggtctggagggagcagcgacggagcggatcctgctggagccgtacaattactta
ctgcagctaccaggaaaacaagtacggactaaactgtctcaggcttttaaccactggctc
aacgtccccgaggataaactgcagattatcattgaggtgactgagatgcttcacaacgcc
agcctcctgatcgacgacattgaggacagctctaagctgcggcgcgggttccccgtagcg
cacagtatctacggcgtgccctcggtcatcaactccgccaactacgtctactttctgggc
ttggagaaagtgctgatgctggacaaccccgaggctgtgcacgtgttcacccgacagttg
ctggagctgcaccgcggccagggcatggacatccactggcgcgacacttacacgtgcccc
agtgaggcagagtaccgcgccatggtcctgcagaagacgggcgggctgtttggtctggcg
gtgggcctcatgcagctcttctctgagtggaagcgtgacctgaagcccctgctcgacacg
ctggggctcttcttccagatccgggatgactacgccaacctgagctcacgcgagtacagc
gccaacaagagcttctgcgaggacctgaccgagggcaagttctccttccccaccatccac
gccatctggtctcgacctgagagcacacaagtgcagaacattctgcgccagcgcaccgaa
aacatggacatcaagcggtactgtgtggactatctggagaaggtgggctcttttgcgtac
accagaaagaccctcagggagctggaggctgaagcgtacagattaatcaaggagttaggt
ggaaacccggagctggagggtcttatagaacatctcagccggatgtataaagagccggag
ccagcatcatcatcatcagcttcagcttcagcttcggatagccagtcgaagcaatga
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