Astyanax mexicanus (Mexican tetra): 103037618
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Entry
103037618 CDS
T05042
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03410
Base excision repair
amex04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103037618 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103037618 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103037618 (parp4)
03036 Chromosome and associated proteins [BR:
amex03036
]
103037618 (parp4)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103037618 (parp4)
Enzymes [BR:
amex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
103037618 (parp4)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103037618 (parp4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
103037618 (parp4)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103037618 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT
BRCT_2
VWA_2
VWA_CoxE
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
103037618
NCBI-ProteinID:
XP_049340708
Ensembl:
ENSAMXG00000016657
LinkDB
All DBs
Position
11:complement(26187695..26220514)
Genome browser
AA seq
1908 aa
AA seq
DB search
MAVFEGCSVVLDLKKLPYKEKKRLMSAIIDYGGNISYVVNQKCSFVVTSSLEDLSSNRLR
SAQKHQIPVVGLQFVWSSLEKGLLLPAEEHGLKPEPSDVTHPPPPHPGMKLSTLFPAELK
SSNQISTRLCKENDLDVPEFPLHFQVAKYTIFHKAASKVWSVLELQSARGEKGQQYRIVK
SVLHETVKTAEKDKQLQSSSSEEAVEVYLIWREELIGKGFTQKQTLPPVAEKLASRGLQQ
LLLEEKLNCSTVTQEVGTFVELIWTEALGSLNSILTVPVSSISLNDVSRVEGLLLQAQKR
EGEVEVKALLDEVKTLLPLVMVDPDSKQKLISQKLDLCQLIRDILNMSEATLGNPSPSSL
GKYRALRCSIDQVPPQSPEFQSVSQLLQDRPVKIQQILRVSRGAEVHMFKEEIGNIKPLL
HSSRPSSFMGILSRGLMLPRVGVEQHGIERTDVGNLGSGIYFSDSLCTSIKYSKPSEMDG
SRLLLVCDVALGQCKDLHWRDITLTRAPEGYSSVHGVQQTQNTHTDFEDDEYVVYNTDQV
RIKYVVRYTLEEDQMKSFQPHVDTSVELVNSTVSAELLSIDDTESLEMTKNPLEEVTAGL
LDSSGQTLPLQAVHVRCKLMDLLSQVIIFQTYTNNSTVPIEAKYVFPLEETAAVCGFEAF
INGKHVIGKVKEKEQARKEYRQAIEKGHGAYLMDQDAPDVFTISVGNLPPGATVLIKVTF
VTELVVRAGSILFSLPGSVAPWQQSAALNQRTQMSVEKVCVNELQPSGEFSLSMSIEMPY
EIKDLECSHRIQIKRTDCKAVVSTKPEQTLNTDGFQLSFTLSQIHMPRMWVEKHPDKDSE
ACMLVFYPDFESTGVSSVSDVVILLDTSESMRGEATLNARRLAIKVLNSLDRSLRVNIIS
FGTDYKEAFPSASVLDNKDVFKSAKTFIMSSPAVGGSTELWRPLRSLNLLPPSHGVRNVL
LVSDGHVQNQPQTLQMVRENARHTRLFTCGLSPTANRHMLRALAQAGGGAFEFFDTKKKH
IWSEKVNSQVKCMASPGCSSVAVKWQQFSPTAPSPVQAPSQLHALFSDCHTLVYGFVPHC
TQATLFGDLSGQEIKTMVSTTELQKTRGTFLHKLTARAIIRDYEDGSLGSSEAEHEGKKA
ELKSYIIELSKEFSILSQFTSFVAIEERDKDQPDSGITDVPKIIAEEDVDILPYMGWTEE
EDMIVDNGEEWGYAFDEEEYEEEDYDEVESDIDAPPDEADFCVAFYEPVCSPAYAPTSPS
ASSIEDNAYAPRRKIQSKICKKAASIQLEQTTSQISDIRKSSLVQENPEFEVLCYREPVK
ATPSVTPAAAAVNMPFKFGEKLVCSDALPQSRQAVPHLPPGAPPTQSFVPFLTAASPLPP
PATTQPISNLFGSVATASSGLFGPTSRSASSFAPPPPPPVTQPIPELESYTSSDSGLRHD
LPPSISFFAPPPPATTQHISNLFGCVATARSVLFGSTSRSAPLPPVNQPIPELESFTTSD
FGLRNDLFPSFSLFAPSPPPPPPLATTQPISNVFGSVATAPSALFGSTSYSVSFAPPPPV
TQPIPELESFPTSDSGLCHDHPPPVSSFASPPILPPILPKPSAVTPQFSLPPAVICRKSS
SLLKTPDAAITPTPPDQWKEAVHDIYSKLSERHRFAPMHSLPASSILAAEGSVDAPLLPE
RMSRLSRHQDADTSAGFGVFSGGRCGGRRRRRNLVDQSEAEFSYISHVQCGSMEYRPTRF
SLRERLRSPDGINWEELFTLQHQDGYWECTRSLSRFLGLDIDFFANVFLKEKGICSLGVK
AHADILKLVATLLVLQLMRVKKMVDVELFQSLFRLSESPEPRPACYDAVKKAVDWVCWAD
RQYPCVCSRLEFGLNWESCTRQLLGLDSLPPCSPLIPVLQRSTGISVM
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatttgagggctgctctgtggttctggacctgaagaaactcccctataaagag
aagaagagactgatgtcagctataatagattatggaggaaacatttcatacgtagtcaac
caaaagtgttcttttgtggtgacgagcagcctggaggacctcagcagtaacagattaaga
agtgcccagaagcaccagatccctgtggttgggctgcagtttgtgtggagcagcctggag
aaaggactcctcctgcctgcagaagagcacggcttaaagccagagccgtccgatgtcaca
cacccaccaccgccacacccaggtatgaagttgtccaccctgtttccagctgaactgaag
tccagtaatcagatatcaaccagattatgcaaggaaaatgatcttgatgtaccggaattt
cctttgcatttccaagttgctaaatataccatttttcacaaggctgcatctaaggtttgg
tcagtcctggagcttcagagtgcaagaggagagaaaggacagcagtatcgtattgtgaag
tctgtcttgcatgagacggtgaaaactgcagaaaaggataagcagctgcagagctccagc
tctgaagaagctgtggaggtgtacctgatatggcgtgaagagctcattggaaaaggtttt
acacagaagcaaactcttcctccagttgctgaaaagctggcttcccgtggcctgcagcag
cttttgttggaggagaagttgaactgcagtacagtcacacaggaagtgggcacctttgtg
gaactgatctggacagaagcccttgggtcactcaacagcattctgactgttcctgtctcc
agcatcagtcttaacgatgtcagcagagtggagggtttgctgctgcaggcacagaagcgt
gagggggaggttgaggtgaaggctctgctggacgaggttaagaccctgttaccgcttgta
atggtggaccctgactcaaaacaaaagcttatatctcagaaactggacctatgtcagctg
atccgagatattctgaatatgagtgaggcgacgttgggaaacccctctccatcctctctg
ggcaagtatcgtgcactcaggtgcagtattgaccaggtgccgccccaaagcccagagttt
cagtctgtctcacagcttttgcaggataggccagtcaaaattcagcagatactgcgtgtg
agcagaggggcggaggtacatatgtttaaagaggaaataggcaacattaagcccctcctc
cattcatctcgccccagcagttttatgggaatcctgtcacggggcctgatgctgcccagg
gttggagtagaacagcatgggattgaaagaacagacgttgggaatctgggaagtggaatc
tacttcagtgactccctgtgcacttctatcaaatactccaaacccagtgagatggatggc
tcccggctgctgctggtgtgtgatgttgctctgggtcagtgtaaggacctgcactggaga
gacatcactctgaccagagctcctgagggctacagcagcgtgcatggagttcaacaaacc
caaaatacacacactgactttgaggatgatgaatatgtggtgtataacacagaccaggtc
aggataaaatatgtagttcggtatactctggaggaggaccagatgaagagctttcagcct
catgttgacacgtctgtagagctcgtaaactctaccgtaagcgctgaactcttgtccatt
gatgacacagagagtttggaaatgacaaagaaccctctggaggaggtcactgctggtttg
ttggacagcagtggtcagacactcccactacaggctgtccatgtgaggtgtaagctgatg
gacctcttgtctcaggttatcattttccagacgtacaccaacaacagcacagtccccatt
gaggcaaagtacgtctttcctttagaagagacagctgcagtgtgtggctttgaggccttc
attaatggaaagcatgttattggaaaggttaaagagaaggagcaggctcgtaaagaatac
aggcaggctattgagaaaggccatggagcgtacctgatggaccaggatgcacctgatgtc
ttcaccatcagcgtgggaaatctcccccctggtgccacagtgctgatcaaagtgaccttc
gtcactgagctggttgtgagagcaggcagcatcctcttctctctgccaggcagtgtagca
ccatggcagcaaagtgctgctctcaatcagagaacccagatgtctgttgagaaggtgtgc
gtaaatgagctccagccatcaggggagttttctctgagcatgtccattgagatgccatat
gagatcaaagatcttgagtgttcccatcgtattcaaataaagaggacagactgtaaggcc
gtagtcagcacaaagccagagcagactctaaacactgatggctttcagctcagcttcact
ctgtctcagattcacatgcccaggatgtgggtggagaagcatccagataaagatagtgag
gcctgcatgttggtgttttatccagactttgagtccactggtgtttctagtgtgagtgat
gtggtcattctactggacacatcagagtccatgagaggagaggccacgctgaacgcacgc
agactcgctataaaggttctcaactcactggatcgttcactccgcgtcaacatcatctcc
tttggaacagattacaaagaggccttcccctcagcaagtgttctagacaacaaggatgtg
tttaaatcagccaagacgtttatcatgtcctctcctgctgttggtggtagcactgagctg
tggaggcctctgcgtagcctgaatctgctgcctccatcgcatggtgtaaggaatgtgctg
ctggtctctgatgggcatgtgcagaaccaaccacagaccctgcagatggtgcgagaaaac
gcccgccacacacgcctcttcacctgcggcctcagcccaacagctaatcggcacatgctg
agagctctggctcaggcaggtggaggggcatttgagttttttgacaccaagaaaaaacac
atctggtctgagaaggtgaactctcaggtgaagtgcatggcatctccaggctgtagctca
gtggcagtgaagtggcagcagttcagtcctacagcgccctctcctgttcaagccccctcc
cagctccatgctctcttcagtgactgtcacactctggtctacggctttgttccgcactgc
actcaggctactctgtttggtgatctaagtggacaagaaattaagacaatggtttccacc
acagaactgcagaagactagaggaacatttcttcacaaactgacagcaagagcgatcatc
agagactatgaggatggcagtcttggctctagcgaagcagaacatgaagggaagaaagcc
gagctgaagtcctacatcatcgagctcagtaaagagttctctatcctgtctcagttcacc
agctttgttgccattgaggaaagggacaaggatcagcctgattctggaatcactgatgtc
ccaaagataattgcagaggaggatgttgacatcttgccgtacatgggctggactgaagaa
gaggacatgattgtggacaatggggaggagtggggttatgcgttcgatgaagaagaatac
gaagaagaagattatgatgaagtagaatcagacattgacgcacctccagatgaggcagac
ttttgtgttgcattttatgaacctgtctgctctcctgcatatgctcccacctccccttct
gcaagtagtatagaggacaatgcgtatgccccaagacgtaagatacaatctaagatatgt
aagaaagcagcatcaatacagttagagcaaaccacctctcaaatatcagatatccgtaag
tcctccttagttcaggaaaatccagagtttgaggtcttgtgttaccgtgagccagttaaa
gctaccccttctgttactcctgcagctgctgctgttaatatgccattcaaatttggagag
aagcttgtatgttctgatgcccttcctcaatcccgccaggcagttcctcaccttcctcct
ggtgctcctcccactcagtcttttgttccttttctaactgctgcttctcctcttcctcct
cctgccaccacccaacccatttccaatttatttggatccgttgccactgcttcttctggt
ctttttggccccacttctcgttctgcttcctctttcgctcctcctcctcctcctcctgtc
acccaacccattcctgaattagagtcctataccagctctgattctggtcttcgacacgac
cttcctccatctatttcatttttcgctcctcctcctcctgccaccacccaacacatttcc
aatttatttggatgcgttgccactgctcgttctgtactttttggctccacttctcgttct
gctcctcttcctcctgtcaaccaacccattcctgaattagagtcttttaccacctctgat
tttggtcttcgaaatgacctttttccctctttttcattatttgctccttctcctcctcct
cctcctcctcttgccaccacccaacccatttccaatgtatttggatccgttgccactgct
ccttctgctctttttggctccacttcttattctgtttcctttgctcctcctcctcctgtc
acccaacccattcctgaattagagtcctttcccacctctgattctggtctttgccacgac
catcctccccctgtttcatcttttgcctctcctcccattttgcctcctatcttgcccaaa
ccttctgctgtcacaccacagttttctcttcctcccgctgtcatatgtcgcaagtcttct
tctctactcaaaactcctgatgctgccatcactcccactccccctgatcaatggaaagaa
gctgtacatgatatatattctaaattatctgaacgccaccgttttgcccccatgcattct
cttcctgcatcttccattctcgctgcggagggttctgttgatgcaccacttttgccagaa
agaatgtcacgtctatcaaggcatcaagatgcagatacctctgctggttttggagttttt
tcaggaggtcgttgtgggggtcgccgtcgtagacgtaatttagttgaccaaagtgaagct
gaattttcatatatttcacatgtacaatgtgggagtatggaataccgaccaacgaggttc
agtttgagagaacgattaagaagtccagacgggatcaactgggaggagctgtttacactt
cagcatcaggacggctactgggaatgtaccaggagtctgagtagattccttggcctggat
atagacttcttcgccaacgtcttcctgaaggagaaaggcatttgctctttgggtgtgaag
gctcatgctgacatcctgaagctggtggccacactgctggtgctgcagctgatgcgagtg
aagaagatggtggatgtggagctgtttcagtctctcttccgcctctctgaatctcctgag
cccaggccagcctgctatgatgcagtgaagaaggcagtggactgggtctgctgggcagac
agacagtatccgtgtgtgtgcagcagactggagttcggccttaactgggagtcctgcaca
cggcagctgctaggactggactccctgcctccctgctcccctctgatccctgtcctgcag
aggagcacaggaatatcagtcatgtag
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integrated database retrieval system
