Astyanax mexicanus (Mexican tetra): 103040955
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Entry
103040955 CDS
T05042
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03030
DNA replication
amex03410
Base excision repair
amex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103040955 (pole)
03410 Base excision repair
103040955 (pole)
03420 Nucleotide excision repair
103040955 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103040955 (pole)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103040955 (pole)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103040955 (pole)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
103040955 (pole)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
103040955 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
APP_N
Motif
Other DBs
NCBI-GeneID:
103040955
NCBI-ProteinID:
XP_007229471
Ensembl:
ENSAMXG00000001201
UniProt:
A0A8T2KTI6
LinkDB
All DBs
Position
Unknown
AA seq
2282 aa
AA seq
DB search
MVLQNSGRFRADRDGGDQDNQQDDGPGMSAVKRLERSQFTDGMDTRFGFERMKEPGEKTG
WLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVVSYLS
KKYQGKVAKLEIVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNRERE
KSNDAYTSMLCSVLAGGNMMTTDEDGTSKKMSDQLDNIVDMREYDVPYHVRLSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEADEAALIQRWFEHVQETKPNIFV
TYNGDFFDWPFVETRAAVHGLSMHQEIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTNDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAVEEEENIPLEQVTNFNEVC
DEIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGRPRAFHELNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
SAQEIGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKPKVTISYPGAMLNIM
VKEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLERVYDSVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFII
SRKPEGSPVTERAIPLAIFQAEASVKKHYLRKWLKMPSLHDLDIRSILDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVTQQKL
DEAPDMEDFGVPQRPLQPAILISTKRKRASQGEDSQAESQELELTQSWREILGPPPPKGT
TKEERLVWLRYHKKKWELQIRQRKERRKKRRLMDGEAQPTGGGVIRGGPTTGLGSFLRRT
ARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEEGATYK
KVNRILPRSNVVYYLYQYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALAQLG
CVCMVNKQVVRELAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFGL
FIPSQRKANVFVLDTVRSNQMPNLSTLYGAERTALLEKTSEDLLPPEKHLFEVRAENDIK
AIYRALQRILLSYKEERRGPTLIAVQSNWDLRRLAAGMGVLEEFPVVPVHVTDEISYNVL
DWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPEDISIFGSDLFLARHLRKHNH
LLWLSPTARPDLGGKEADDSRLVMESDERGSVEINTQGCYSTVCVELDIQSLAVNTILQS
QHINDMEGGASLGVSFDVIQQSSLEDMMSGNQGASAVASYDETALCSNTFRILKSMVVGW
VREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHCTLLNMMKKLFLQLVAEFKRLGSS
VLYGNFNRIILSTKKRRIDDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLMWMDPANY
GGVKGKLPSSLMYGENERKKKGKKEGQDEGSEDEEDEEADEQEDEDQDGDEVEDLIESNW
NIMQYLPQTASCQKYFLMIISAYIAAVYHSMKEELRRNAPGATPVKRRGGSQMSQQPAGD
VSALPGLITFSQEYVSSELTQSFFTITQKIQKKVSGTRSVTLPSEMFPVLPGSHLPLNNP
ALEFIKYVCQVLSLDANIANQVNKLKRDLLRLVEVGEFSEDAQFRDPCNSYILPEVICHH
CNYCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYDTDLIEMALVEALQKKLMSYTLQDLE
CAKCHGVKEANMPLYCSCAGDFKLTFTIKSFTEQITVFRNIAAHYNMNFLLETIDWILRM
NT
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggttctacagaacagtggaagattcagagcagaccgggatggaggagaccaagacaac
cagcaggatgatggacccggcatgtctgccgtcaagcggcttgaacgaagtcagtttact
gatggaatggacacacgcttcggatttgagcgaatgaaggagcctggagaaaaaactgga
tggctgatcaacatgcatccgacggagattttggatgatgacaagaggatgatcagtgct
gtggattattacttcattcaggaagatggcagcagattcaaggtggctttaccatttaag
ccatacttctacatagccactaaaaagaactgtgagagagaagtcgtctcctacttgtca
aagaagtaccaaggaaaggtggcaaaactggagattgtgcccaaagaggatctagatctg
ccgaaccacctggtgggtctgaagaggaactacatcaaactgtcctttaacacagtggac
gacctaatcaaagtgaagcgagagatttcacctgccgttagaaagaacagggagagagag
aaatctaatgatgcctacaccagcatgctgtgcagtgtactcgcaggtgggaatatgatg
acaactgatgaagatggtacatcaaagaaaatgtctgaccagctagacaacattgtggat
atgagggagtacgatgtaccttaccatgtaaggctgtccattgacctcaagatccatgtg
gctcactggtataacgtgcggtacagaggcagtgcataccctcctgagattgtgcgtagg
gatgatcttgttgaaagacctgatcctgttgtattggcatttgatattgagaccacaaag
ctccctcttaagttccctgatgcagaaacagaccagattatgatgatctcctatatgatt
gatgggcagggtttcctgatcacaaacagggagattgtctctgaggatattgaggatttt
gagttcacccctaagccagagtacgagggaccctttactgtgtttaatgaagctgatgag
gctgctctcatccagagatggtttgagcacgttcaggaaaccaaacctaacatatttgtg
acctacaacggggacttttttgactggccgtttgtggagacacgtgctgccgtccatggc
ctcagcatgcaccaggagattggctttcagaaggataaccagggtgaatacaaagccagc
caggccattcacatggactgtctgaggtgggtaaaaagagacagttacctgccagttggt
agccataatctcaaggcagcagccaaggccaagctgagctatgaccctgtggagctggat
ccagaggagatgtgcagaatggctactgaagaaccacagacattggctacctactcagtg
tcggatgcagtggccacatactacctgtatatgaaatacgtacatccattcatcttcgct
ttgtgcaccatcattcccatggagccggatgaggtattgcgcaaaggttcagggacgctg
tgcgaggcgttattgatggtgcaggctttccatgccaacattgttttccccaataagcag
gagcaagtgttcaataaactcacaaatgacggtcatgttttagactctgagacctatgtg
ggaggtcacgtcgaggccctggagtctggagtcttccgcagtgacatcccctgccgtttc
aaaatgaaccctgcagccttcgacttcctgcttcagagggttgaaaggactcttcgtcac
gcagttgaggaagaagaaaatattcctctagagcaggtcacaaatttcaatgaggtttgc
gatgagatcaagaagaagctgatctccctgaaggaagtaccaaataggattgagtgccct
cttatttaccatctggacgttggggcaatgtaccccaacatcattctcaccaacagactg
cagccatctgccatggtagatgaggcaacctgtgcagcatgtgattttaataagcctgga
gccaactgccagcgaaggatgacctggcagtggagaggagagatcatgcctgccagtcgt
agcgagttccaccgtatccagcagcagttggagtctgagaagttcccccctctgtttcca
aatgggagacctcgagctttccatgagctcaacagggaggaacaagctcgacatgagaag
aaacgtctgggagattactgcagaaaggcctataagaaagtgcacttgaccaggctggag
gaaagagttacgactatctgtcagagagagaactccttctacgtcgacacggtccgggct
ttccgtgatcgccgttatgaattcaaaggattacataaggtgtggaagaaaaagctgtct
tcggctcaagagattggtgatgcagctgaagtgaagcgctgtaagaacatggagatcctt
tatgagtctctgcagctcgcccacaagtgcatccttaactccttctacggatacgtcatg
aggaaaggagcacgttggtattcgatggagatggctggaattgtgtgtcacacgggagcc
aacatcatcactcaggccagagaactgatcgagcagattggacgacctttggagttggac
actgatggtatctggtgtgtccttcccaacaccttccctgagaactttgtcatcaagtca
accaatgagaagaaacctaaagtgaccataagttaccctggagccatgctgaacatcatg
gtcaaggagggtttcactaatcatcaataccaggagctggtggatccagcctctctcacc
tatgagacaagggctgaaaacagcatcttttttgaggtggacgggccgtacctggccatg
atcctgcctgcttccaaagaagagggcaagaagctgaaaaaaaggtatgccgtgtttaat
gaagacggctctctggctgagctgaaaggctttgaggtgaagaggagaggagagctccag
ctcattaaaatcttccagtcctctgtgttcgaggcctttcttaagggcaccactttggag
agggtttacgactcagtcgccaaagtggccgactactggctcgatgtgctctacagcaag
gcggcgaacatgccagacgcagagctgtttgagctgatctcggagaaccgctctatgtcc
cgtaagctggaggactacggcgaacagaagtccacctctatcagcacagccaagcgactt
gccgagtttcttggtgaccagatggtaaaggatgcaggtctgagctgtcgtttcatcatc
tcccgcaaacctgagggctcacctgttacagaaagggcaattcctctggctatattccag
gctgaagcaagtgtaaagaagcattacctgcgcaaatggcttaagatgcccagcctccac
gatctggacattagatcaatccttgactggagttactacattgaaagacttggtagtgct
atacagaagatcatcaccattccagcagcattacagcaggtgaaaaaccctgttcctagg
gtacgccatccagactggctgcataagaagcttctggaaaagaatgacatctacaaacag
aagaaaatcagtgagctgttcacaagcgaaggaaaaagacaggtgacacaacagaagctg
gacgaggcgccagatatggaggattttggggttccgcagcgccccctacagcctgctatc
cttatcagcaccaagaggaagcgagcatctcagggtgaggacagccaggcagagtctcag
gagctggagctcactcagtcctggagagagatactgggaccaccaccacctaaggggaca
acaaaggaggagcggttggtctggctgcgctaccacaagaagaaatgggagctgcagatc
cgccagagaaaggaacgaaggaagaagcgtcgcttgatggatggagaggctcagccaact
ggaggcggtgtaatcaggggcgggccaaccacaggactgggcagcttcctgcgtaggacg
gccaggagcattctggacatgccctggcaaatagtgcagattgcagagaccagtcaccca
ggcctatataagctgtgggcagtgattggcagtgaccttcactgtatgaagctcaatatt
cctcgagttttctacgtcaatcagagagtgcccaaacaagaagaaggggccacttacaaa
aaggtgaaccggattttgccacgttccaacgtggtgtattacctgtaccagtactctgtg
cctgaggacatgtatcaggaacacatcaatgagatcaatgcagacctctctgcccccgac
atcgagggagtctacgagacacaggtgccgctgctgttccgggcactggcgcagctgggc
tgtgtgtgtatggtcaataagcaggtggttagggagcttgctggacgggaggcagacaca
ttcgatctggagcacctggagatgaggtctcttgcacagttcagctacctggagccagga
agtgtaagacacatgtacctgtatcatcacagtcagggacacaaggctctgtttggcctc
ttcatcccttcacagcgtaaagccaacgtctttgtccttgatacggtacggagtaaccaa
atgccaaatttgagtacgctttatggagcggagcgcacagctctgttggagaaaacatca
gaggatctgcttccaccagagaagcacctgtttgaagttcgtgctgaaaatgatataaag
gccatctaccgcgccctgcagcgcattctgctaagctataaggaggagcgacgtggtccg
actcttattgccgttcagtctaactgggacctgcggagacttgcagctggtatgggtgtg
ctggaagagtttccagtggttccagtgcatgtgactgacgagatcagctacaatgtgctg
gactggcagcggcacggcgcccgtcgcatgatcaaacactacctgaacctggacagctgc
ctttctcaggcatttgacatggccagatattaccacctgcctgtggggaacctgcctgag
gacatctccatctttggctcagacctattcctggcacgtcacctgcggaagcacaaccat
ctgctgtggctttctcccacagcaagacctgaccttgggggcaaggaggccgatgacagt
cgcctggtgatggagagtgatgagcgtggttctgtggagatcaacacacaaggctgctac
tccacagtatgtgtagagttagacattcagagcttggcagtgaacaccatcctccagtct
cagcatataaatgacatggagggaggggccagtctgggtgtgagctttgatgttatacag
caatcgtctcttgaggacatgatgtcaggaaaccagggagcaagtgctgtggccagctat
gatgagacagccctctgctccaatacattcaggatcctgaagagtatggtggttggctgg
gtgcgggagattacgcagtaccataacgtttatgcggataaccaggtgatgcacttctac
cgctggctgcgctcccccagttctctgctgtatgacccagcactgcactgcacacttctc
aacatgatgaagaagctctttttgcaactggttgctgagtttaagcgactcggttcgtct
gtgctctatgggaactttaaccgcattatcctcagtactaagaaacgacgcattgacgat
gctatcgcgtatgtggaatacatcactaacagtatccattcgcgagagatcttccactct
ttgtccatcactttctcccgatgttgggaattccttatgtggatggatcctgccaactac
ggaggagtcaaggggaagctgccttccagtctcatgtatggagagaatgaaagaaagaaa
aaaggaaagaaggaaggacaagacgagggcagtgaggatgaggaagatgaagaggctgat
gaacaggaggatgaagatcaagatggagatgaggttgaggacctgattgagagcaactgg
aacatcatgcagtatctgcctcagactgcttcctgccagaaatattttctcatgatcatc
tcagcttatatagctgctgtgtatcacagcatgaaggaggagcttagacgaaatgctcct
ggagccacgcctgtaaagaggcggggtgggagccaaatgtctcagcagcctgctggtgat
gtcagcgcactacctggtttgattacgttctctcaggagtatgtatctagcgagctgacc
cagagcttcttcaccatcacccagaagattcagaagaaggtgtctgggacacgcagcgtg
actctgccgtccgaaatgttcccagttctgcctggatcacaccttccgctcaacaaccct
gctctagagttcatcaaatatgtctgccaggtcctctccctggatgcgaacattgcgaat
caggtgaataagttaaagcgggacctccttcgtttggtggaagttggggagttctctgaa
gatgctcagtttcgagatccctgcaattcttacatcttacctgaggtcatttgccatcac
tgcaactactgtcgtgatcttgacctttgcaaagatccgtccgtagcccaggatggttca
gtcctccctcagtggttctgctccaactgccaggcccagtacgacactgacctgatagaa
atggctctggtggaggctctacagaagaagctgatgagttacactctgcaggacctggaa
tgtgcaaagtgccatggagtgaaggaggccaacatgccgctgtactgcagctgcgcagga
gacttcaaactcaccttcaccataaagagcttcacagagcagatcacagtgtttcgcaac
attgctgcccactataacatgaacttcctgctggagaccatcgactggatcctgaggatg
aacacttaa
DBGET
integrated database retrieval system
