Astyanax mexicanus (Mexican tetra): 103047220
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Entry
103047220 CDS
T05042
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103047220
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amex01001
]
103047220
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103047220
03036 Chromosome and associated proteins [BR:
amex03036
]
103047220
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
103047220
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103047220
Protein kinases [BR:
amex01001
]
Serine/threonine kinases: Other
TAF1 family
103047220
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103047220
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
103047220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
103047220
NCBI-ProteinID:
XP_007235909
Ensembl:
ENSAMXG00000007593
UniProt:
A0A8B9LC95
LinkDB
All DBs
Position
3:complement(37542745..37568768)
Genome browser
AA seq
1969 aa
AA seq
DB search
MSDSDSDEDQDRPFQLTGFLFGNINEDGQLEDDSVLDTESKKHLAGLGSLGLGALITEIT
ASEEDTSNQDRDQGNTDADGWVKSTDDAVDYSDISEVAEDETRKYRQAMGNLQPSQRTDD
DDDYDADSEDIDAKLMPPPPPPTLAAGAKKDDLPTQGNTVNDEGDGIILPSIIAPSSAGD
KVEFSSSSDSESESDRAPSSAGAGSQSRVLTLPLAGIMQRDAAKALPGVTELFPEFRPGK
VLRFLRLFGPGKNMPSVWRSARRKRKKKHKDPHSDTPIADGESSVPEGGAEKKSGWEYDY
APPPPPEQCLSDDEISMMAPVESKSLQVTCEGDKVADMRPKVAEWRYGPAQLWYDMMGVP
EDGAGFHYGLKLKEESQEEQEEKNTITQTPAQTHTPPAETVQEEQEEETEMDKTVDVGQL
EDELFLMVTQLQWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLNRS
NSQLVPPTPPPITKTLSITGSKRDKHSHDHLVSHEDDNPWFSIFPIDNEELVYGRWEDNI
IWDDQKMERLLSPPVLTLDPNDENIILEIPDEKEERTSHSPSKENKKESALKKSRILLGK
TGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPSVELRQPFFP
THMGPMKLRQFHRAPLKKYSFGALSQPGPHPVQPLLKHIKKKAKMREQERQASGGGDMFF
MRTAQDLTGKDGDLILAEYSEEYPPLMLNVGMATKVKNYYKRKPGKDPGAPYCKYGETVY
CHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYFIREVSDIMVVGQ
ECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRK
RLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYG
EKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFS
YVKVPNKPTQQKDEREPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWE
VIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLS
TDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEEERKELQRMLLGEDGSDRDKS
RKERRKAFSSAQSTSSHKDDDASSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKP
TVIDAYLRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKFRCPPE
KRPKKAKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVI
HNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGSTIHCDYLN
RPNKSIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPVNAKVVKDYYKIITRPMDLQ
TLRDNVRKRLYPSRDEFRESVELIVKNSATYNGAKHPLTQVAQAMLDLCDEKLKEKEERL
VRLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVTESWPFHHPVNKKFVPDYYKVIANPM
DLENLRKNISKHKYQNREVFLSDVSLIHANSVKYNGSDSQYTKTALEIVNVCKQTLAEYD
EHLTQLEKDISTAKEAALDAADLESLDPLTPGPYTPQGDVSLLAEATLIPPISQKRGGQG
RGRGRLGEEESDVDIEGFEEDDDGKPKTPAPVYLGAEDGDLDDDDDEMLLPPRRRMDEDD
EEYDEGSSRPAQPSVLYQDLLMSDVEDEGSEEEGDNPFSSIHLSESGSDSDREAGHQETA
RMGMEQEESMMSYEGEVPDEDTHMEDSNVSYGSYDEGDSHRQGRSSSPGGGEVEGLYGVS
EEEEEEEEDEGEEQRRGPSVLNQVQLSEDEEDSEEFRSIGGDSDMDSDT
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagacagtgatgaggatcaggatcggccattccagctgaccggcttcctg
tttggaaacattaatgaagatggacagctggaggatgacagtgtgctggatacggagtct
aagaagcacctggctggtttgggttctctgggtttgggtgctctgattacagagattaca
gcaagtgaagaggatacgtccaatcaggaccgagaccagggcaacactgatgcagatggg
tgggtaaagagcactgatgatgctgtggattattcagacatcagtgaagttgctgaagat
gaaacacgcaaatacagacaggccatgggtaacctgcagccttcacagagaacagatgat
gacgatgattatgatgctgactctgaggacatcgatgccaagcttatgcctcccccacca
ccaccaaccctggcagccggtgcaaagaaagatgacctgcctacacagggtaacactgta
aatgatgaaggtgacggcattattcttccctccatcattgctccctcctctgcgggtgat
aaggtggagttcagcagctcatctgacagtgagagtgaaagtgatagagcaccatcctct
gcgggagcagggtctcagagccgagttctaacactaccactcgcaggaattatgcagaga
gatgcagctaaggcactgccaggggttaccgaactatttcctgaattcagaccgggcaag
gtgctgcgctttctccgtctcttcggacctgggaagaacatgccatcagtctggcgcagt
gccaggaggaagaggaagaagaagcacaaagacccacattctgacacaccaattgcagac
ggtgaatcgagtgtgccagagggcggcgctgaaaagaaatctggttgggagtatgattat
gccccacccccacctccagagcaatgtctgtcagatgatgagattagtatgatggccccg
gtggagagtaagtctctgcaggtaacatgtgagggggataaggtagcagacatgcggccg
aaggtggctgagtggcgctatggtccagctcagctctggtacgacatgatgggagttcca
gaggatggagcaggatttcactatggattaaaactcaaagaggaatcgcaggaggagcag
gaagaaaaaaacaccatcacacaaactccggcacagacacacacacctccggctgagacc
gtgcaagaagaacaggaggaggaaacagaaatggacaagacggttgatgtaggtcagctg
gaggacgagctattcctaatggtcactcagctacagtgggaggatgacattatctggaat
ggagaagatgtgaaacataagggcacaaaaacacagagagccagtctggcagggtggctt
ccatccagcatgacccgcaacgcaaacgcatataatgcccagcagggtttgaaccgcagt
aactctcagctggtgccccccactccacctcctattaccaaaactctgtctataaccgga
tccaagagagacaaacacagtcacgaccacctggtttctcatgaggacgacaatccctgg
ttttccattttcccaatcgataatgaggagctggtgtacggacgctgggaagataacatc
atctgggatgatcagaaaatggaacgcctgctctcgcctcctgtactgaccctcgacccc
aacgatgaaaacatcatactggagataccagatgaaaaggaagagaggacgtctcactct
ccctcaaaagaaaataagaaagaatctgctctgaagaagagccggattcttctgggaaag
accggagtaattaaagaggaacctcagcagaacatgtctcagccagaggtgaaggaccca
tggaatctgtccaatgatgagttttactaccccaaacagcaagggcttaggggcacattt
ggaggcaacatcattcagcactctattccttcagtggagttgaggcagccattctttccc
acgcatatgggtccgatgaagctgcgccagttccaccgggctcctttaaaaaagtattcg
tttggagcattatcacagccgggcccacatccagtacagcctctacttaaacacatcaag
aagaaggccaagatgcgagaacaggagcggcaggcttctggtgggggtgatatgtttttt
atgcgcacggctcaggatctgactggtaaagatggagatctaatcctggcagaatacagt
gaagaatatcctcctctaatgctgaatgttggcatggcaaccaaagtcaagaattactac
aaaagaaagccaggtaaagatccaggtgctccatactgtaagtatggagagacagtgtac
tgccatacctcacctttcctcggttcgctccaccccggacaactactgcaggcatttgag
aataatttgttcagagcgccgatctacttgcacaagatgccggagacagacttcctgatc
atccgcaccagacagggttactttatccgagaggtttcggatataatggtggtcggacag
gagtgcccattgtatgaagtgcctggaccaaactccaaacgcgccaacacgcacatccga
gactttctgcaggtgtttatatacagattgttttggaagagtaaggatcgtccgaggcgt
atccggatggaggatattaaaaaggcctttccctctcactcagagagcagcatccgcaaa
cgcctcaaactatgtgcagattttaaacgcacaggtatggactctaactggtgggtttta
aagcctgattttaggctccctacagaagaagagattagagcaatggtttctccagagcag
tgctgtgcttattacagcatgcttgtggcagaacaaaggctgaaggatgctggttatggt
gaaaaatccttctttgccccagaggaggaaaatgaagaagattttcagatgaagatcgat
gatgaggtgcgcacagctccgtggaacaccacccgtgcattcattgctgcaatgaaagga
aaatgcctgctggaggtcactggggttgcggaccccaccggctgcggagagggcttcagt
tatgttaaagtaccaaataaaccaactcagcagaaggatgaacgtgagcctcagcctgtg
aagaagacagtaacagggacggatgctgatctgagacgactgtctctcaaaaacgccaaa
cagctattgcgcaagtttggcgttccagaagaagagattaagaagctgtctcgctgggag
gtgatagatgtggtgcggacgatgtccactgagcaggctcgttcgggtgaagggcccatg
agtaaatttgcccgtggctcacggttctctgtcgcagaacaccaggagagatacaaggag
gagtgccagaggatattcgacctgcagaacaaggtgctggaatctacagaagtactgtcg
acagacacagacagcagttctgcagaggacagtgattttgaggagatggggaagaacata
gagaacatgctgcaaaacaaaaagacgagttctcagctgagtcgggagagggaagaggag
gagcgaaaggagcttcaacgaatgctgctgggagaggatgggtcagaccgtgacaagagc
cgcaaggagagacggaaagcattctcgagtgctcagtccaccagctctcacaaagatgac
gatgcttcctcggttacgagtctgaactcctcagcgacgggacgcaggctgaaaatctac
aggacgttccgggatgaggatggtaaagaatacgtccgatgtgagacggtccgcaagccg
actgtcattgacgcttacttgcgcatacgcaccaccaaggacgatgagttcattcggaag
tttgctctgtttgatgagcagcacagggaagagatgaggaaagagcggcgaaggattcag
gagcagctccgcagactcaaacgcaaccaggagaaggacaagttccgctgtccgccagaa
aaacgtcccaaaaaggctaaagagaggcccgatctaaagctgaagtgtggagcatgtggc
gcgattggtcacatgaggacgaataagttctgcccactgtactatcagaccaatgccccg
ccctctaaccctgttgccatgacagaggagcaggaggaggaactggagaagactgtcatt
cataatgataatgaggagctcattaaagtggagggaaccaagatcgttctgggaaaacag
ctaatagaaagtgcggatgaggtgaggaggaagtctctggtcctgaaattccccaaacag
cagctcccgccgaaaaagaagagacgtgttggcagcaccattcattgtgactaccttaac
cgtcctaacaagtctatccaccggcgaagaactgacccaatggttactctttcttctgta
ctggagagcatcattaacgacatgagagatcatcctaatacatacccgttccacacccca
gtgaatgctaaggtggtgaaggactattataaaatcatcactcggccaatggatctgcag
actctgcgggacaatgttcgaaaacgtctttatccttcccgagacgagttcagagaaagc
gtggagctaatcgttaaaaacagcgctacttacaatggagcgaagcatcctctgacgcag
gtggctcaggccatgttggacttgtgcgatgaaaagctgaaagagaaagaggagcgtctg
gtgcgtctggagaaagccattaatcctctgctggacgacgatgaccaagtagcattctcc
ttcatcctcgacaacattgtcactcagaagatgatggctgtaactgaatcatggccattc
catcatcctgtaaataaaaagtttgttcctgattattacaaagtcatcgccaaccccatg
gacctggagaacctgcgaaagaacatcagtaagcacaagtatcagaaccgtgaggtgttc
ctgtcggatgtcagtttgatccatgccaacagtgtaaaatacaacggttctgacagtcag
tacacgaaaactgctctggagattgtaaatgtctgcaagcagactttagctgagtatgat
gagcatttgactcagttagagaaggacatctctacagctaaagaagctgctctggatgct
gctgaccttgagagtttagaccctctgaccccaggaccatacacacctcagggtgatgtt
agcctgttagccgaggctacgctaattcctcccatctctcagaaacgaggggggcagggt
cgtggacgtggccgactgggggaggaggagtcagatgttgacattgaagggtttgaagaa
gatgatgatggcaaacccaaaacacctgctccggtatatttgggggctgaagacggtgat
ttggacgatgatgacgacgagatgctacttcctcctcggcggaggatggatgaggatgat
gaggagtatgatgaaggctctagcaggccagcacagcccagtgttttgtatcaagatctg
ctgatgtcagatgtggaagatgagggcagtgaagaggagggagacaacccattttcctca
atccacctatcagagagcgggagtgacagtgaccgggaagctgggcatcaggaaactgct
cgcatggggatggagcaggaagagagcatgatgtcatatgagggggaggtaccagacgag
gatacacacatggaggacagcaacgtcagttatggcagttatgatgaaggggacagtcat
cgtcaaggacggagctccagccccgggggaggcgaggtggaggggctgtatggtgtgagt
gaggaagaagaggaagaggaggaagatgaaggagaagagcaacggagaggaccaagtgtt
ctaaatcaggttcagcttagtgaggacgaggaggacagtgaagaattcaggtccatcgga
ggggacagtgatatggactcagatacttaa
DBGET
integrated database retrieval system
