Alligator mississippiensis (American alligator): 102559718
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Entry
102559718 CDS
T03087
Symbol
POLR3A
Name
(RefSeq) RNA polymerase III subunit A
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03020
RNA polymerase
amj04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102559718 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102559718 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102559718 (POLR3A)
Enzymes [BR:
amj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102559718 (POLR3A)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
102559718 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bac_DNA_binding
DUF3654
Motif
Other DBs
NCBI-GeneID:
102559718
NCBI-ProteinID:
XP_006269703
UniProt:
A0A151MT36
LinkDB
All DBs
Position
Un
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHAPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLTSE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKSICPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPVVSNFLQSFEAAIENNKEIESLLGRAQENLNPLIVLNRFKRIPAEDIPLLLM
NPETGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANIDFLRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCTNDSYVTIHNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFLFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIVQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCQSEPALSKNELVLTAESIMKKNEFLC
CQDSFLQEIKKFLKSISEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDIDDDSDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSIYISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKIV
VQGIPEVSRAVIHIDEQSGKQKYKLLVEGDNLRAVMATHGVKGTKTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKESTPPTRPLIFD
SNEFHIPIIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacggacgtggccaagaagataagccacatttgtttt
gggatgaagtctcccgaggagatgcgccagcaggcccacatccaggtggttagcaagaac
ttgtacagccaggacaaccaccacgccccactacagtatggcgttctggaccaccgcatg
ggtaccagtgaaaaggaccgtccatgtgaaacatgtgggaagaatcttgctgactgtttg
gggcattatggctacattgacttggaactgccatgtttccatgttggctactttaaagct
gtgataggtatcttacagatgatttgcaaaacctgttgccgcattatgctgacctcagag
gaaaaaaaacagtttttggattatttgaagagacctggcttgacatacctccagaaacga
ggactgaaaaagaaagtctctgaaaagtgcaggaagaaaagtatctgtccttactgtggg
gcttttaatggtactgtgaagaaatgtggtttattgaagataatccatgagaagtacaag
accaataagaaagtggtggatccagttgtatccaatttccttcagtcttttgaagctgct
atagaaaataacaaagaaatagagtccttgctggggagagctcaggagaacttgaaccct
ttaatagtgctgaaccgctttaaaaggataccggcagaagatattcctctgcttctgatg
aacccagagacaggaaagccttcagatttgattctgacacgactcttggtgcctccctta
tgtattcgaccatctgtagtgagtgacttgaagtctggcaccaatgaagatgacttgaca
atgaaactgacagaaattattttccttaatgatgtaataaaaaagcataggatatcagga
gccaaaacacagatgataatggaagactgggacttcctgcagctgcagtgtgctctctac
attaacagcgagctctctggaattccccttaacatggcacctaagaaatggaccagagga
tttgttcagaggctgaaggggaagcagggtcggtttagaggcaacctgtctggaaagcga
gttgacttctcaggcagaacagttatctcccctgatcctaacttaagaatagacgaggtg
gcagtacctgttcatgttgccaaaatattaacatttcctgaaaaagtgaacaaagcaaac
atagatttcttgaggaaacttgttcgcaatggtcctgaggttcaccctggagccaacttc
attcagcaaaggcacacacagatgaaaaggtttttgaaatatggcaaccgagagaagatg
gctcaggagctgaaatttggggacattgtggaacgacatcttatagatggggatatagta
ttgttcaaccgacagccctctctccacaagctgagcattatggcccacatagctagagta
aaaccacacaggactttcaggtttaatgaatgtgtctgtacaccatacaatgcagatttt
gatggagatgagatgaaccttcatcttccccaaacagaagaggccaaagcagaagcactt
gttctgatggggaccaaagcaaacttagtaactccaagaaatggagagcctctcattgct
gctatacaagattttcttacaggtgcctatctgcttacgctaaaagacaccttttttgac
agagccaaagcctgtcaaattattgcttctatcctggttggcaaggatgagaagattaaa
gttcgccttccaccccctgcaatcctaaagcctgtaaccctctggacaggaaagcaggtc
ttcagcctcattctcaaacctagtgatgactgtcctgtaaaagccaacctccggaccaag
ggcaaacagtattgtggcaaaggggaagacttgtgtactaatgattcttatgttacaatc
cacaatagtgagctgatgagtggcagcatggacaaaggaactttaggatctggatccaag
aacaatatcttttacattttgctgagggactggggtcaggtagaagctgcagatgctatg
tcacgattagccaggcttgcacctgtctatctctctaatcgtggattctcaattgggatt
ggtgatgtcaccccaggccagggactgctaaaagccaagtatgaacttctgaatgctggc
tataagaaatgtgatgaatacattgaagctttaaacactggcaaactgcagcagcagcct
ggctgtactgcagaagaaaccttagaggctttaattcttaaagagctctctgttatcaga
gaccacgctggcagtgcctgtctcagagaattggacaagagtaacagtccccttatcatg
gctctctgtggttctaaaggttcctttattaatatatcccagatgattgcctgtgtaggg
cagcaggctatcagtgggtcacgagtccctgatggatttgaaaatcggtctctacctcac
tttgagaagcattccaagcttccagcagcaaaaggttttgttgccaatagtttctattct
gggctgactcctacagagtttttattccacaccatggctggtcgggaaggtcttgttgat
acagctgtaaaaacagccgaaactggatatatgcagaggcggctggtgaaatcacttgaa
gatctttgctctcaatatgacctgactgttagaagttctactggtgacattgttcaattc
atttacggaggagatggtttagatccagcagccatggaagggaaggatgaacccttggag
ttcaaacgggttctggacaatatcagagcagtttatccatgtcagagtgaaccagctctt
agtaaaaatgaattggtattaactgccgagtccatcatgaaaaagaatgaattcctctgc
tgccaagacagttttttacaggagattaaaaaattcctcaaaagtatttctgaaaagatc
aagaaaaccagggacaagtatggtattaatgacaatggcacaacagagccacgtgtcttg
taccaattggatcgaattaccccaacacaactagagaagtttctagagacttgtagagac
aaatatatgagggcacagatggagcctgggtctgcagttggggcactatgtgctcaaagt
attggtgagcctggcacacagatgaccttgaagactttccactttgctggtgttgcttcc
atgaacatcactctgggtgtaccacgaatcaaagaaatcattaatgcctccaaagcaatt
agcacacctattatcacagcacagttggatatagatgacgattcagattttgcccgtctg
gttaagggaagaattgagaaaaccttattaggagagatatcggagtacatcgaagaagtg
tttcttccagatgactgctttattctggtcaaactctctttggagcggatcagattgctg
agactagaggtgaatgcagagactgtacgatactctatttacatatcgaagctaagagta
aagccaggggatgttgctgttcatggagaggcagttgtgtgtgtgacccctcgtgagaac
agcaagagttcaatgtattatgtcttgcagtccctgaaagaagagctgccaaagattgta
gtgcagggtatcccagaggtgtctcgagctgtcattcacattgatgaacaaagtgggaag
cagaaatacaaacttctggtggaaggtgataacctacgagctgtcatggccacccatggg
gtcaaaggaactaagacgacatctaataatacttatgaggttgaaaaaacactgggcatt
gaagctgctcggactactattatcaatgagattcagtacactatggtaaaccatggtatg
agcattgataggaggcatgttatgctgctctcggatctgatgacatacaagggtgaagtc
cttggcattactaggtttggcctggcaaagatgaaggaaagcgtgttaatgctggcatct
tttgaaaagactgcagaccatctctttgatgctgcctactttggacagaaagattctgtt
tgtggtgtttcggaatgcatcatcatggggattccaatgaatattggaactggacttttc
aaactgctgcacaaagcagacaaagaatcaactcctcctaccaggcctctgatctttgat
agcaatgaattccatattcccattatcacatag
DBGET
integrated database retrieval system
