KEGG   Alligator mississippiensis (American alligator): 102567542
Entry
102567542         CDS       T03087                                 
Symbol
POLR2D
Name
(RefSeq) RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03020  RNA polymerase
amj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102567542 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102567542 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amj03021]
    102567542 (POLR2D)
   03400 DNA repair and recombination proteins [BR:amj03400]
    102567542 (POLR2D)
Transcription machinery [BR:amj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102567542 (POLR2D)
DNA repair and recombination proteins [BR:amj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102567542 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Rop
Other DBs
NCBI-GeneID: 102567542
NCBI-ProteinID: XP_019341670
LinkDB
Position
Un
AA seq 104 aa
MLLEHRKQQNESAEDEQELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELA
CLANLCPETAEEAKALIPSLEGRFEDEELQQILDDIQTKRSFQY
NT seq 315 nt   +upstreamnt  +downstreamnt
atgctgcttgagcatcgcaagcagcagaatgagagtgcagaggatgagcaggagctctca
gaagtcttcatgaaaacgttgaactacacggctcgtttcagccgcttcaaaaaccgagag
actattgccagtgtccgcagtttattgctccagaagaagctccataaatttgaattggcg
tgcttagctaatctttgtcctgagacagctgaggaggccaaggctctgattcccagccta
gagggccggtttgaggatgaggagttacagcagattcttgatgatattcagaccaaacga
agcttccaatattag

DBGET integrated database retrieval system