Alligator mississippiensis (American alligator): 102567630
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Entry
102567630 CDS
T03087
Symbol
GLB1
Name
(RefSeq) galactosidase beta 1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj00052
Galactose metabolism
amj00511
Other glycan degradation
amj00531
Glycosaminoglycan degradation
amj00600
Sphingolipid metabolism
amj00604
Glycosphingolipid biosynthesis - ganglio series
amj01100
Metabolic pathways
amj04142
Lysosome
Module
amj_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
102567630 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
102567630 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
102567630 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
102567630 (GLB1)
00511 Other glycan degradation
102567630 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102567630 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102567630 (GLB1)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
102567630 (GLB1)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102567630 (GLB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
102567630
NCBI-ProteinID:
XP_006263119
LinkDB
All DBs
Position
Un
AA seq
662 aa
AA seq
DB search
MLLASCTPGLAMPPLLLRLAALLALLPASVPQRSFGIDYNCNCFVKDGKPFRYISGSIHY
ARVPRYYWKDRLLKMKMAGLDAIQTYVPWNYHESEPGLYNFSGDRDVEYFLQLANETGLL
VILRAGPYICAEWDMGGLPAWLLEKESIILRSSDLDYLASVDKWMGVFLPKMKPLLYQNG
GPIIMVQVENEYGSYFACDYNYLRYLQKLFRHHLGEDAVLFTTDGASRSYLRCGALQGLY
ATVDFAPGCNVTAAFLSQRSSEPTGPLVNSEFYTGWLDHWGHRHSFVPAQLVAKSLSEIL
ARGANVNMYMFIGGTNFAYWNGANMPYTPQPTSYDYDAPLSEAGDLTEKYFALREVIGMY
KSLPEGPIPPTTPKFAYGQVQMEKIGTLLEVLDDLSPSGPVKSIYPLTFVQLKQYFGFVL
YRTNLKKNYSEETLLISPLSGVHDRAYISVDGIPQGVLERGKSLMINITGEAGANLDLLV
ENMGRVNYGRYNNDFKGLVSNLTLDQDILVDWEIYPLDIDRAVGRGLKCDDDELKTPGNT
PPSYELPAFYTGTLSIPSGIPDLPQDTYIRFPGWTKGQIWINGFNLGRYWPARGPQMTLF
VPSNILVSSAPNNITVLELERSPCSIQECVVEFVDKPDINATFQYEGNSEKLFSKDLWLS
HL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgctgttggcttcctgcacccccgggctcgccatgccgcccctgctgctgcgcctggcc
gcgctgcttgccctgctgcccgcgagcgtacctcagagaagtttcggaattgactataac
tgcaactgcttcgtcaaggatgggaagccattccgctacatctcgggtagcattcactat
gcccgtgtgccccggtactattggaaagaccgtttgttgaagatgaagatggcagggctt
gatgccattcaaacgtacgtgccatggaactatcatgaatctgagccaggactatataac
ttctctggtgacagagatgtagaatatttcctgcagctagctaatgagactggcttgttg
gtaatactgagagctggaccttatatctgcgcagaatgggacatggggggtctgcctgca
tggttattggaaaaagaatcaattattctcagatcttctgatttagattacctggcatct
gtggacaagtggatgggtgtctttttaccaaagatgaagcctcttctttatcaaaatgga
ggtccaattattatggtgcaggttgaaaatgagtatggaagctactttgcctgtgattac
aattaccttcgctatcttcagaagctcttccgccaccaccttggggaggatgcggtgttg
tttaccacagatggggcaagcagaagttacttgagatgtggagccctgcaaggtctttat
gcaacagtggattttgccccaggttgtaatgtcacagcagcatttttatctcaaagaagc
agtgaaccaacaggccctttggttaattctgagttctatactggctggttggatcactgg
ggtcatcgtcattcttttgtgccagcccagctggtagctaaatctcttagtgaaatcctg
gcacgtggtgctaatgttaacatgtacatgtttataggtgggaccaattttgcctactgg
aatggagcaaatatgccatacacaccacagcctactagttatgactatgatgctccatta
agcgaagcaggagacctcacggagaaatactttgctctgagagaagtaattggtatgtat
aaaagcttacctgagggtcctatccctccaacaacaccaaagtttgcatatgggcaggtt
caaatggagaagataggcactctgctagaagttcttgatgatctgtcaccgtctggacca
gtaaaaagcatttatccattgacgtttgttcagctaaaacaatattttgggtttgtgttg
tacaggacaaacctgaaaaaaaactatagtgaggaaaccctactgatttcacctctcagt
ggagttcatgatcgtgcctacatctctgtggatgggattcctcagggagtccttgaaaga
ggcaagtcacttatgataaatataactggagaggctggagcaaatctggacctgttagta
gaaaacatgggtcgagtaaactatggtagatacaacaatgactttaagggtctggtttca
aacttaacacttgatcaagacatacttgttgactgggaaatctaccctctagacatagac
agagcagtgggacgtggcctaaaatgcgatgatgatgaattgaaaacacctggaaatact
ccaccaagctatgaactacctgctttttacactggtacattatctattcccagcgggatt
ccagacttaccccaggacacctatattagatttcctggttggaccaagggacaaatctgg
atcaatggctttaacctcggtcgctactggccagcccgtggtcctcaaatgaccctgttt
gttccaagcaatattcttgtatcgtcagcaccgaacaatattacagtactggagttggag
cggtctccttgcagcatccaggaatgtgtcgtagaatttgtagacaaacctgacatcaat
gcaacattccagtatgaaggcaacagtgagaagctgttctctaaagatttatggctgagc
catctgtga
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