Alligator mississippiensis (American alligator): 102574919
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Entry
102574919 CDS
T03087
Symbol
GRIN2B
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04020
Calcium signaling pathway
amj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102574919 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102574919 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102574919 (GRIN2B)
Ion channels [BR:
amj04040
]
Ligand-gated channels
Glutamate (ionotropic)
102574919 (GRIN2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102574919
NCBI-ProteinID:
XP_006269848
LinkDB
All DBs
Position
Un
AA seq
1501 aa
AA seq
DB search
MRPRAECYSPQFWLVLAVLATTGGGAHAQKSHPSIGVAVILVGTSDEVAIKDAHEKDDFH
HLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTL
TPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQ
DFVNKIRSTIEHSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYI
FEVANSVGLTGYGYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAII
TTAASDMLSEHSFIPEPKSSCYNTQEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHP
KLVIILLTKERKWERVGKWKDKNLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVI
VENVDPLSGTCMRNTVPCQKRVVSENKTDEEPDYMKKCCKGFCIDILKKISKSVKFTYDL
YLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGP
SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMVKFNQRGVGDAL
LSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDL
AILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFIC
EHLFYWQFRHCFMGVCSGKPGMVFSISRGIYSCIHGVAIEERQSAMNSPTATMNNTHSNI
LRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCEENL
FSDYISEVERTFGNLQLKDSNVYQDHYHHHHRPHSIGSASSIDGLYDCDNPPFSAQPRSI
SKKPLDLGLPSSKHSQLGDLYGKFSFKSDRYSGGGGHDDLIRSDVSDISTHTVTYGNIEG
NAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPPRSPDHKRYFRDKEGLRDFYLD
QFRAKENSPHWEHVDLTDIYKERGDEFKRDTVGGGGSCTNRAHHKHGSGEFGSANEHKHG
VVSGVPAPWEKNLTNLDWEDRTGANFCRSCPSKLHNYTPTVVGQNSTRQPCIRCEACKKA
GNLYDISEDNSLQELDQPPAPVPVPTSASSSSKYPQSPSNSASKVQKKNRNKLRRQHSYD
TFVDLQKEESALAPRSVSLKDKGRFLEGSPYAHMFEMPANETTFANNKSSVPATSYHHHN
NPGGSGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPVVAGGPKARPDFRAI
VTTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKNPRAFNGSSNGHVYEKLSSIESD
V
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccagggcagagtgctattctccacagttttggctggtgttggcagtcctagca
acaacgggtggtggggcccatgcccagaagagccaccccagcattggtgttgctgtcatt
ctcgtgggtacctcagacgaagtggccatcaaggatgcccacgagaaagatgacttccat
cacctctcagtggtgccccgggtcgaactggtggccatgaatgagacagaccccaagagc
atcatcactcgcatctgtgacctcatgtcagaccggaagattcaaggtgtggtgtttgct
gatgacacagaccaggaagccattgcccagatcctggacttcatttctgcccagaccctc
acacccatcctgggcatccatggaggctcctccatgatcatggcagacaaggatgaatca
tccatgttcttccagtttggcccatcaatagaacagcaagcctctgtcatgctcaacatt
atggaagaatatgactggtatatcttctccattgtcaccacctacttccctggctaccag
gactttgtcaacaagattcgcagcaccattgagcacagctttgtgggctgggagctggag
gaggttctcctgctggacatgtccctagatgatggggactcgaagatccagaaccagctc
aagaagctacagagtcctgttatcctcctctactgcaccaaggaagaggcaacttatatc
tttgaggtagccaactctgtgggtctgacaggctatggttacacatggatcgtgcccagc
ctggtggcaggcgatacagacacagtgccatctgagttccccactgggctcatctctgtc
tcatatgatgagtgggactatggtcttcctgccagagtgagggatgggatagccataatc
accacggctgcctctgacatgctatctgaacacagcttcatccctgagcccaagagcagc
tgttataacacccaggaaaaaaggatataccagtccaacatgctcaacaggtacctgatt
aatgtcacctttgaagggaggaacttgtccttcagtgaggacggctaccagatgcatccc
aagctggtcatcatccttctgaccaaggagaggaagtgggagagggtggggaaatggaag
gataaaaacctacagatgaagtattatgtgtggccccgctttgagctgtaccctgactct
gaggagcgggaggatgatcatctgagtattgtgaccctagaggaggcaccattcgtcatt
gtggagaatgtggacccgctaagtggcacctgtatgaggaacacagtcccctgccaaaaa
cgcgtcgtgtctgaaaacaaaacggacgaagagccagattacatgaagaaatgctgcaag
gggttttgcattgacatcctgaagaaaatctccaagtctgtcaagttcacttatgatctc
tacctggtgactaatggcaagcatgggaagaagatcaatgggacgtggaatggaatgatt
ggagaggtggtcacaaagcgtgcctacatggcggtgggttccctcaccataaatgaggag
cggtcagaagtagtggacttctccgtgcccttcattgagacaggaatcagcgtcatggtg
tcacgtagcaatggaactgtctcaccttctgcctttctagagccattcagtgctgatgtg
tgggtgatgatgtttgtgatgctgctcataatctctgcagtggctgtttttgtttttgag
tacttcagccccgtgggttacaatcggtgcctagctgatggcagagagcccggtggtccc
tctttcaccattggcaaagctatctggttgctgtggggtctggtgttcaacaactctgtg
cctgtgcagaatcccaaaggtaccactagcaagatcatggtctctgtgtgggcctttttt
gctgtcatcttcctggccagctacactgccaacctggctgccttcatgatccaagaggaa
tatgtggatcaggtgtctggcttgagcgacaaaaagttccagaaacctaatgacttctca
ccccctttccgctttgggacagttcccaatggcagcacagaaaggaacattcgcaacaac
taccctgaaatgcatagctacatggtgaagttcaatcagaggggggtaggggatgcactg
ttatcactgaaaactgggaagttggatgccttcatttatgacgcagcagtgctaaactac
atggctggcagagacgagggctgtaaactggtaacaattggaagtgggaaggtgtttgcc
tccacaggctatggcattgccatccaaaaggactctggctggaagcgccaggttgacctt
gccatccttcagctttttggtgatggagaaatggaggagttggaagctctttggctcact
ggcatttgtcataatgaaaagaatgaggtaatgagcagccaacttgacatagacaatatg
gcaggggtcttctacatgctgggggcagccatggctctcagcctcatcaccttcatctgt
gagcatctcttctactggcaattccgtcactgcttcatgggtgtctgctctggcaagcct
ggtatggtcttctctatcagcaggggtatctacagctgcattcatggtgtagctattgag
gaacgtcagtcagcgatgaactctcccacagcaactatgaacaatacccattccaacatc
ttgcgcctactccgcacggcaaagaatatggccaatttgtcaggggtcaatggctcaccg
cagagtgccctggactttatccgccgtgaatcatccgtctatgacatctctgagcaccgc
cgcagcttcactcattctgattgcaagtcttataacaaccctccctgtgaggagaacctc
ttcagtgactacattagtgaggtagaaaggacctttggcaacttgcaactgaaagatagt
aatgtgtatcaggaccactaccaccatcaccaccggccccacagtatcggcagtgccagt
tccattgatggactgtatgactgtgacaacccacccttcagtgcccagccaaggtccatc
agtaagaagccattggaccttggtttgccatcttccaagcacagtcagctaggtgatctc
tatggcaagttctccttcaagagtgatcgctacagtggtggagggggccatgatgacttg
atccgctcagatgtctctgacatttccacccacacggtgacttatggcaacattgaaggt
aatgctgccaagcggcggaagcagcagtataaggacagcctgaagaaacgtccagcctca
gctaagtcacggcgggaatttgatgagattgaactagcctaccgccgacgcccaccccgt
tcccccgatcacaagcgctacttcagggacaaggaagggctacgagacttctacctggac
cagttccgggccaaggagaactcaccgcactgggagcatgtggacctgacagatatctac
aaagagcggggagatgagttcaagcgtgacactgtagggggaggaggatcctgcaccaac
agggcccaccacaagcatggatcaggggagtttggaagcgccaatgagcacaagcatggt
gttgtgagtggggtgccggcaccatgggagaagaatctgaccaacctagactgggaggac
cggactggggctaatttctgtcgtagttgcccctctaagctgcacaattatactccaaca
gtggtgggacagaactccacccggcagccatgcatccggtgtgaggcgtgtaaaaaagca
ggcaacctctatgacatcagtgaggataactcccttcaagagctggaccaaccgcctgcc
cctgtgccagtgccaaccagcgcctcctcctcctccaagtatcctcagagcccttccaac
tctgcctccaaggtgcagaagaagaaccgcaacaagcttcgccggcagcattcctatgac
acctttgtagacctgcagaaggaagaatcagccctggccccccgcagtgtaagcctgaag
gacaagggccgctttttggaggggagtccctatgcccatatgtttgagatgccagccaac
gagaccacctttgccaacaacaagtcctcagtgcccgccaccagctaccaccaccacaac
aaccccggcggcagtggctacatgctcagcaagtcgctctatcccgaccgggtcacgcaa
aaccctttcattccaacttttggggatgaccaatgcttgctccacggcagcaaatcttat
ttcttcaggcagcctgtggtggcaggggggcccaaagccaggccagacttccgagccatc
gtcaccaccaacaagccggtggtatcagcccttcatggggctgtgccagcccgtttccag
aaggacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaaaccccagg
gctttcaatggctccagcaacgggcatgtttatgagaaactctccagtattgagtctgat
gtttga
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integrated database retrieval system
