Alteromonas macleodii Black Sea 11: AMBLS11_00070
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Entry
AMBLS11_00070 CDS
T02260
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk03030
DNA replication
amk03410
Base excision repair
amk03420
Nucleotide excision repair
amk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMBLS11_00070
03410 Base excision repair
AMBLS11_00070
03420 Nucleotide excision repair
AMBLS11_00070
03440 Homologous recombination
AMBLS11_00070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amk03032
]
AMBLS11_00070
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_00070
Enzymes [BR:
amk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMBLS11_00070
DNA replication proteins [BR:
amk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMBLS11_00070
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMBLS11_00070
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMBLS11_00070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFT76608
LinkDB
All DBs
Position
complement(15653..18442)
Genome browser
AA seq
929 aa
AA seq
DB search
MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV
IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVEPGVEADDVIGT
LAKHATEKGIDTLISTGDKDMAQLVNEHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYKNLDKIAELSFRGSKSMAAKMQEYE
EQARLSHTLATISIDLDLDYDVEELMPCQADNEQLRDLFAEFEFKRWHAEVSALLAGGDT
TTAVAASEDADDSEQDSSSGSSVDIDKSKYETVLDEERFNAWVEKLVNAELFAFDTETTS
LNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPAQLSREFVLDALKPILESDKVIKVGQH
IKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEEIAGKG
AKQLTFNQISLEEAGPYAAEDADITLRLHNAIWTKLKDIPELKNLLIDVEVPLACVLSRM
EQEGVLIDSQKLRQQSQDLATRIAELEKEVHEEAGEPFNLGSTKQLQQILFEKMSLPIIK
KTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSYH
QAVTATGRLSSTDPNLQNIPIRNEEGRRVRQAFIPREGNKFVAADYSQIELRIMAHLSGD
KGLLDAFAHGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLNIP
RNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKGAE
RAAINAPMQGTAADIIKMAMIKVDDWIRKNASDDVTMMMQVHDELVFEIKEDKVETYVST
ITALMESAATLNVPLVVEAGVGDNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattctaaaaagcctccatttattcttgtcgatggatcgtcgtatctttttcgt
gcctttcacgggttgccgccgctgaccaattcaaaaggccaagacaccggtgcaatctat
ggtgttgtaaacatgcttaaaagcttgattaagcaatacaaccctacgcacatggcggtg
atttttgatgccaagggcaagacctttcgcgacgacatctataaagagtacaaagcgaac
cgtccgccaatgccagatgagctaagaagccagatcgaacctttacatgccatcatcaaa
gcgatgggtttacccgttattgttgagccaggagtagaggcggatgacgtaattggtacg
ttggccaagcacgctacagagaaaggtattgatacccttatcagcaccggcgataaggac
atggcgcagctggtaaatgaacatgtcaccttgatcaacaccatgacgaatcaattgatg
gatgttgagggtgtaaatactaagtttggtattccaccagagcttgtgatcgattttctt
gcgcttaagggcgataaagtagacaacatcccgggcgttccaggtgtgggtgataagagt
gcccaagccttgttaaatggtattggcggcattgacgacatttataaaaatctagataaa
atcgctgagttgtcgtttaggggcagtaaatcgatggcagctaaaatgcaagagtatgaa
gagcaagctcgtctttctcatacacttgctaccatcagtatagatctcgatctggactat
gatgttgaagaattaatgccatgtcaggccgacaatgagcagctgcgagatctgtttgcc
gagttcgagtttaaacgttggcacgccgaagtaagtgcccttttagctggcggtgatact
acaactgccgtcgccgctagcgaagacgctgatgatagcgagcaagatagctcatcaggt
tcatccgtagatattgataaatcgaaatacgaaaccgtacttgacgaggaacgatttaac
gcttgggtcgagaagctagtaaacgcagagttattcgcatttgataccgagactactagc
cttaattacatggatgcagaattagttggcgtttcattttgtatagaagaaggtgaagcc
gcttacgtgcctgttgctcacgattacccagatgcccccgcccagctatcgcgagaattt
gtattagacgcgttaaaacctattttggaatcagacaaagtgatcaaagtaggccagcat
attaagtacgacaagaatgtactagctaactacgatatcaccttaaacggtattggcttt
gacaccatgcttgaaagctatgtgctaaacagtactgcacagcgccacgatatggactca
cttgccctagcctatttaggccataagacgattcactttgaagagatagcaggcaaaggc
gctaaacagcttacgtttaatcaaattagtcttgaagaagctggcccgtacgctgcggaa
gatgctgatatcacgctacgcttacacaatgcaatttggactaagttaaaagatatccct
gagcttaaaaacttgctgatagatgttgaagtaccccttgcttgtgttctttcccgtatg
gagcaagagggggtgttgattgacagtcaaaagctacgtcaacaaagtcaggaccttgct
acgcgtattgcggaacttgagaaagaagttcacgaagaagccggcgaaccctttaacctt
ggctcaaccaagcaacttcagcaaattttgtttgaaaagatgtcgctgccaatcataaag
aagacgcctaaaggtgcgccatctacttctgaggacgtactgcaagaacttgcgcttgag
tatccgttaccgaagaagatcatggaataccgaggcttaaccaagcttaagaatacctac
acggataaacttcctaagatgatcaatcatcgcacgggccgggtacacacttcctatcac
caagcggtaacagcaactggacgcctatcttcaacggatcctaatttacagaacatccct
attcgaaacgaagaaggacgtcgtgtgcgtcaggcatttataccaagagaagggaataaa
ttcgttgctgccgactactcgcaaattgaattgcgaataatggctcacctttcgggtgat
aagggtctattagacgcctttgcacatggcaaagatattcataaagctacagcctctgaa
gtatttggtgttccactagatgaagtaaccactgaacagcgtcgcagtgcaaaagcgatt
aactttggtcttatctacggtatgagtgcatttggattgtcaaagcaacttaatattccg
cgcaacgaagcacaaaagtacatggatctttactttgaacgctaccctggcgtgcttgaa
tatatggactctacacgtgagagcgccaaggaaaaaggatatgtagagactgtattcggg
cgcagactttatttgccagacattaaagctagtaatggagcacgtcgaaaaggtgcagag
cgcgcggcgattaatgcgcctatgcaaggcacggctgcagacatcattaagatggcaatg
atcaaagttgatgactggatcaggaaaaatgcatctgatgatgtgaccatgatgatgcaa
gtacacgatgaattggtttttgagataaaagaagacaaggttgaaacctatgtctctact
attactgctcttatggaaagcgcagccacccttaacgttccgttagtcgtcgaggctggt
gtgggcgataactgggatgaagcgcactag
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