Ailuropoda melanoleuca (giant panda): 100463847
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Entry
100463847 CDS
T01329
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aml03016
]
100463847 (CDKAL1)
Enzymes [BR:
aml01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100463847 (CDKAL1)
Transfer RNA biogenesis [BR:
aml03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100463847 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
100463847
NCBI-ProteinID:
XP_034516151
Ensembl:
ENSAMEG00000017897
LinkDB
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Position
5:complement(6160618..6784161)
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AA seq
617 aa
AA seq
DB search
MSWRAPSEVFPVSAERRVVLSLWADFTEDLRLTADNQEKMPSASCDTLLDDIEDIVLQGD
LKPQDRHSARKHVVPKARKRNTQKYLQEENSPPSDSTIPGIQKIWMRTWGCSHNNSDGEY
MAGQLAAYGYEITENASDADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQA
QPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKNNGKRLGGARLDLPKIRKN
PLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGA
YGRDIGTSLPALLWKLVEVIPEGAMLRLGMTNPPYISEHLEEMAKILNHPRVYAFLHIPV
QSASDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATDIICGFPGETDQDFQETVKLVE
EYKFPSLFINQFYPRPGTPAAKMAQVPAQVKKQRTKDLSRVFHSYNPYDHKIGERQQVLV
TEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMIEVDIYESGKHFMKGQPVSDAKVYTPSI
NKPLAKGEVSGLTEEFRNRLGNHLSSVPHASAAVRQDPASSRMAPRLQRLHQDCALRVSV
GLALCALLLAFLVKVYN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggcgagctccatctgaagtgtttcccgtatctgcagaacggcgtgtggttctc
tcactttgggctgactttacagaggatttgagactaactgcagataatcaagagaagatg
ccttctgcatcctgcgacacactactggatgacatagaagatatcgtgttacagggagac
ttaaagccacaagataggcattctgcacgaaagcacgttgttccaaaggcacgaaagcga
aacacccaaaaatatttgcaagaggaaaacagtccaccaagtgatagcaccattccaggc
atacagaaaatttggatgcgaacgtggggttgttctcataataattcggatggagaatac
atggctggacagctagccgcttatggatatgaaattacagaaaatgcatcagacgcagat
ttatggctcctgaatagttgtactgtaaaaaacccagccgaagaccactttagaaactca
attaaaaaagctcaagaggagaataagaagatagtgctagctggatgtgttcctcaagcc
cagcctcggcaggactaccttaaaggactgagtatcataggggttcaacagatagatcga
gtggtagaagttgtggaagaaacaattaaaggtcactctgtgagactgctgggtcagaaa
aagaataatggaaagcgcttgggtggagcgcgattggatttgccaaagatcaggaagaat
ccactgatagaaatcatttccatcaatactgggtgtctcaatgcttgtacctactgcaaa
actaaacacgccagaggaaatttggccagttacccaattgacgaactagtagaaagagcc
aaacagtcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacaggggct
tacggcagagacattggcaccagtctccccgcactgctgtggaagctggttgaagtgatt
cctgagggagcaatgctgaggcttggcatgaccaatccaccctatatttcagagcatctg
gaggaaatggcaaaaatcctcaatcatcccagagtctacgcttttctgcacatcccagtc
cagtctgcctctgacactgtactcatggaaatgaaaagggaatactgcgtggctgacttc
aaaagagtagtggattttctgaaagagaaagttcctggaataactcttgctacagatatc
atctgtggttttcctggagaaacagatcaggattttcaagaaacagtgaaacttgtggaa
gagtacaaatttccaagcctgtttattaaccagttttacccaagaccaggaactcctgct
gcaaaaatggcacaagttccagcacaagtgaaaaagcaaagaacgaaagatctttctcgg
gtattccattcttacaatccatatgatcacaagattggcgaaagacaacaagtgttagtg
acagaagaatcttttgattccaagttttatgttgcccacaatcgattctacgagcaggtt
ttagtgccaaagaaccccacattcatggggaaaatgatcgaagtggacatttatgaatca
ggcaaacattttatgaaagggcagccagtgtcagatgccaaagtatacacaccgtccatc
aacaaaccattagcaaagggagaagtctcaggtttaacggaggaattcagaaataggctt
gggaatcacctgagctcggtgccccatgcttctgctgcggttcggcaggaccccgcgagc
tcccgaatggctccccgcttgcaaaggctccatcaagactgcgcactgagggtgtctgtg
ggcctggctctgtgtgctctccttctggcttttttggtcaaagtctataattaa
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