Ailuropoda melanoleuca (giant panda): 100465687
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Entry
100465687 CDS
T01329
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04014
Ras signaling pathway
aml04015
Rap1 signaling pathway
aml04020
Calcium signaling pathway
aml04024
cAMP signaling pathway
aml04080
Neuroactive ligand-receptor interaction
aml04713
Circadian entrainment
aml04720
Long-term potentiation
aml04724
Glutamatergic synapse
aml05010
Alzheimer disease
aml05014
Amyotrophic lateral sclerosis
aml05016
Huntington disease
aml05017
Spinocerebellar ataxia
aml05020
Prion disease
aml05022
Pathways of neurodegeneration - multiple diseases
aml05030
Cocaine addiction
aml05031
Amphetamine addiction
aml05033
Nicotine addiction
aml05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100465687 (GRIN1)
04015 Rap1 signaling pathway
100465687 (GRIN1)
04020 Calcium signaling pathway
100465687 (GRIN1)
04024 cAMP signaling pathway
100465687 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100465687 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100465687 (GRIN1)
04720 Long-term potentiation
100465687 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
100465687 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100465687 (GRIN1)
05014 Amyotrophic lateral sclerosis
100465687 (GRIN1)
05016 Huntington disease
100465687 (GRIN1)
05017 Spinocerebellar ataxia
100465687 (GRIN1)
05020 Prion disease
100465687 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
100465687 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
100465687 (GRIN1)
05031 Amphetamine addiction
100465687 (GRIN1)
05033 Nicotine addiction
100465687 (GRIN1)
05034 Alcoholism
100465687 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100465687 (GRIN1)
Ion channels [BR:
aml04040
]
Ligand-gated channels
Glutamate (ionotropic)
100465687 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
100465687
NCBI-ProteinID:
XP_034520756
Ensembl:
ENSAMEG00000016461
LinkDB
All DBs
Position
7:60020637..60045136
Genome browser
AA seq
943 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
VDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTQYHPTDITGTLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgacactcgccctgcttttctcctgctcctttgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggagctgtgctgagcacgcggaagcacgagcag
atgttccgtgaggccgtgaaccaggccaacaagcggcatggctcctggaagatccaactc
aatgccacctccgtcacccacaagcccaacgccatccagatggccctgtcggtgtgcgag
gacctcatttccagccaggtctacgccatcctagttagccacccacctacccccaacgac
cacttcactcccacccccgtctcctacacagccggcttctaccgtatccccgtcctgggg
ctgaccacccgcatgtccatctactcagacaagagcatacacctgagcttccttcgcacg
gtgccgccctactcgcaccagtccagtgtgtggttcgagatgatgcgtgtctacagctgg
aaccacgtcatcctcttggtcagcgacgaccacgagggcagggccgcgcagaagcgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggctgagaaggtgctgcagttcgacccg
gggaccaagaatgtgacggccctgctgatggaggcacgggagctggaggcccgggtaatc
atcctctctgccagcgaggacgacgccgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctccgggtatgtgtggctggtgggggagcgcgagatctcagggaacgctctg
cgctacgccccggacggcatcatcggactgcagctcatcaatggcaagaacgagtcagcc
cacatcagcgacgccgtgggcgtggtggcccaggcagtgcacgaactcctggagaaagag
aacatcaccgaccctccccggggctgcgtgggcaacaccaacatctggaagacagggccg
ctcttcaagagagtgctcatgtcttccaagtatgcagacggcgtgacaggccgcgtggaa
ttcaatgaggatggggaccggaagttcgctaactacagcatcatgaacctacagaaccgg
aagctggtgcaagtgggcatctacaatggcacccatgtcatccccaacgacaggaagatc
atctggccgggtggagagacagagaagccccgagggtaccagatgtccaccaggctgaag
attgtgacgatccaccaggagcctttcgtgtacgtcaagcccacgctgagcgatggcaca
tgcaaggaggagttcaccgtcaatggggaccccgtcaagaaagtgatctgcaccgggccc
aacgacacgtcgccgggcagccctcgccacactgtgcctcagtgctgctatggcttctgc
gtcgatctgctcatcaagctggcgcggaccatgaacttcacctacgaggtgcatctggtg
gctgacggcaagttcggcactcaggagcgggtgaacaacagcaataagaaggagtggaat
gggatgatgggcgagctgctcagcgggcaggcggacatgattgtggcgccgctgaccatc
aacaacgagcgtgcgcagtacatcgagttctccaagcccttcaagtaccagggcctgact
attctggtcaagaaggagatcccccgtagcacactggactcgttcatgcagcccttccag
agcacgctgtggctgctggtggggttgtcggtgcatgtggtggccgtgatgctgtacctg
ttggaccgtttcagccccttcggccggttcaaggtgaacagcgaagaggaggaggaagac
gcgctgaccctgtcttcggccatgtggttctcctggggcgtcctgctcaactcgggtatc
ggggaaggcgccccccggagcttctcagcgcgcatcctgggcatggtgtgggccggcttc
gccatgatcatcgtggcctcctacaccgccaacctggcggccttcctggtgctggaccgg
ccggaggagcgcatcaccggcatcaacgacccacggctgaggaatccctccgacaagttc
atctacgccacggtgaagcagagctcggtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcacatggagaagcacaactacgagagcgccgcggaggccatccag
gccgtgcgggacaacaagcttcatgccttcatctgggactcggcggtgctggagttcgag
gcctcgcagaagtgcgacctggtgaccaccggcgagctgttcttccgctcgggctttggc
attggcatgcgcaaggacagcccctggaagcagaatgtctccctgtccatcctcaagtcc
catgagaacggcttcatggaagatctggacaagacctgggtgcggtaccaggagtgtgac
tctcgcagcaacgcccctgctaccctcacctttgagaacatggcaggggtcttcatgctg
gtggctgggggcatcgtggctgggatcttcctgattttcattgagatcgcctacaagcga
cacaaggatgctcgacggaagcagatgcagctagcctttgcggcagtgaacgtgtggaga
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccttggcttccagcttcaagagacgtaggtcctccaaagac
acgcagtaccatcccactgatatcacgggcacgctcaacctctcagatccctcggtcagc
accgtggtgtga
DBGET
integrated database retrieval system
