KEGG   Ailuropoda melanoleuca (giant panda): 100476564
Entry
100476564         CDS       T01329                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03020  RNA polymerase
aml03420  Nucleotide excision repair
aml05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100476564 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100476564 (POLR2I)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100476564 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aml03021]
    100476564 (POLR2I)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100476564 (POLR2I)
Transcription machinery [BR:aml03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100476564 (POLR2I)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100476564 (POLR2I)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR
Other DBs
NCBI-GeneID: 100476564
NCBI-ProteinID: XP_002920967
Ensembl: ENSAMEG00000000993
UniProt: D2HFU4
LinkDB
Position
12:39604674..39606957
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggaaccagacgggacctacgagccgggtttcgtgggtattcgattctgccaggaatgt
aacaacatgctttaccccaaggaggacaaggagaaccgcattctgctctacgcgtgtcgg
aattgtgattaccagcaggaagccgacaacagctgcatctacgtcaacaagatcacgcac
gaagtggacgaactgacccagatcatcgctgacgtgtcccaggaccccacgttgccgcgg
accgaggaccacccgtgccaaaagtgtggccacaaggaggcggtgttcttccagtcgcat
agtgcccgggcggaggacgccatgcgcttgtactatgtgtgcacggccccacactgtggc
caccgctggaccgagtga

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